Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g030800 Pisum sativum HOM05D006919 ORTHO05D008705 2.2e-174 615.5 316 100.0
TPR.G8644 Trifolium pratense HOM05D006919 ORTHO05D008705 2.3e-163 578.9 316 93.4
Medtr6g069620 Medicago truncatula HOM05D006919 ORTHO05D008705 4.8e-161 571.2 316 92.4
Phvul.004G150300 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 2.6e-151 538.9 314 87.6
Phvul.004G149400 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 7.7e-151 537.3 315 87.0
Glyma.07G102800 Glycine max HOM05D006919 ORTHO05D008705 3.6e-148 528.5 318 85.2
Lj2g0027212 Lotus japonicus HOM05D006919 ORTHO05D008705 4.7e-148 528.1 303 87.5
Lalb_Chr24g0398171 Lupinus albus HOM05D006919 ORTHO05D008705 1.0e-147 526.9 315 84.8
arahy.Tifrunner.gnm1.ann1.CTKR59 Arachis hypogaea HOM05D006919 ORTHO05D008705 1.2e-143 513.5 315 82.2
CANSAT80G0223 Cannabis sativa HOM05D006919 ORTHO05D008705 8.5e-142 507.3 316 80.4
Potri.015G037600 Populus trichocarpa HOM05D006919 ORTHO05D008705 3.0e-139 498.8 314 78.3
Dinv08205 Davidia involucrata HOM05D006919 ORTHO05D008705 2.6e-138 495.7 316 78.5
CiPaw.15G143800 Carya illinoinensis HOM05D006919 ORTHO05D008705 4.4e-138 495.0 316 78.5
COL.COLO4_04912 Corchorus olitorius HOM05D006919 ORTHO05D008705 1.3e-137 493.4 313 78.0
Gorai.001G068200 Gossypium raimondii HOM05D006919 ORTHO05D008705 2.2e-137 492.7 313 78.0
Gohir.A07G060000 Gossypium hirsutum HOM05D006919 ORTHO05D008705 3.7e-137 491.9 313 77.3
arahy.Tifrunner.gnm1.ann1.95HZXM Arachis hypogaea HOM05D006919 ORTHO05D008705 6.3e-137 491.1 358 72.6
Gohir.D07G064700 Gossypium hirsutum HOM05D006919 ORTHO05D008705 1.1e-136 490.3 313 77.6
Thecc.03G055400 Theobroma cacao HOM05D006919 ORTHO05D008705 1.8e-136 489.6 314 77.4
VMungo0464G0753 Vigna mungo HOM05D006919 ORTHO05D008705 3.1e-136 488.8 314 81.2
Prupe.5G234100 Prunus persica HOM05D006919 ORTHO05D008705 7.0e-136 487.6 316 76.9
QL10p029823 Quercus lobata HOM05D006919 ORTHO05D008705 9.1e-136 487.3 316 76.9
Duzib205G1348 Durio zibethinus HOM05D006919 ORTHO05D008705 1.6e-135 486.5 314 76.4
MD06G1227700 Malus domestica HOM05D006919 ORTHO05D008705 3.5e-135 485.3 316 74.7
Actinidia18895 Actinidia chinensis HOM05D006919 ORTHO05D008705 1.7e-134 483.0 316 75.3
Atru.chr9.1714 Acer truncatum HOM05D006919 ORTHO05D008705 2.2e-134 482.6 315 75.6
RcHm_v2.0_Chr7g0178261 Rosa chinensis HOM05D006919 ORTHO05D008705 9.4e-133 477.2 316 73.4
FvH4_5g17430 Fragaria vesca HOM05D006919 ORTHO05D008705 2.3e-131 472.6 317 73.2
Atru.chr9.1680 Acer truncatum HOM05D006919 ORTHO05D008705 6.8e-131 471.1 322 73.6
PGR083G2730 Punica granatum HOM05D006919 ORTHO05D008705 6.8e-131 471.1 315 71.7
CsaV3_1G007200 Cucumis sativus L. HOM05D006919 ORTHO05D008705 8.8e-131 470.7 312 75.3
TAR629G0573 Trochodendron aralioides HOM05D006919 ORTHO05D008705 1.2e-130 470.3 316 75.3
GSVIVG01008449001 Vitis vinifera HOM05D006919 ORTHO05D008705 3.4e-130 468.8 314 72.9
CSS0007871 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 9.8e-130 467.2 318 74.2
TWI81G0447 Tripterygium wilfordii HOM05D006919 ORTHO05D008705 1.7e-129 466.5 316 75.0
Migut.D01529 Erythranthe guttata HOM05D006919 ORTHO05D008705 1.1e-128 463.8 319 72.4
AUR62020416 Chenopodium quinoa HOM05D006919 ORTHO05D008705 2.4e-128 462.6 314 73.9
Nn4g24311 Nelumbo nucifera HOM05D006919 ORTHO05D008705 5.4e-128 461.5 315 74.3
Migut.D01538 Erythranthe guttata HOM05D006919 ORTHO05D008705 7.0e-128 461.1 319 72.4
PGSC0003DMG402005674 Solanum tuberosum HOM05D006919 ORTHO05D008705 4.5e-127 458.4 316 72.2
CAN.G843.52 Capsicum annuum HOM05D006919 ORTHO05D008705 1.7e-126 456.4 316 72.8
Sed0003421 Sechium edule HOM05D006919 ORTHO05D008705 1.7e-126 456.4 303 74.9
arahy.Tifrunner.gnm1.ann1.2R737Y Arachis hypogaea HOM05D006919 ORTHO05D008705 2.3e-126 456.1 315 75.9
AT1G48550 Arabidopsis thaliana HOM05D006919 ORTHO05D008705 3.8e-126 455.3 315 71.4
THA.LOC104820349 Tarenaya hassleriana HOM05D006919 ORTHO05D008705 3.8e-126 455.3 316 72.5
FAN08G0969 Fragaria x ananassa HOM05D006919 ORTHO05D008705 8.6e-126 454.1 306 71.9
AL1G55190 Arabidopsis lyrata HOM05D006919 ORTHO05D008705 1.1e-125 453.8 315 71.1
Carub.0001s3766 Capsella rubella HOM05D006919 ORTHO05D008705 1.1e-125 453.8 315 70.5
Aqoxy3G04092 Aquilegia oxysepala HOM05D006919 ORTHO05D008705 1.9e-125 453.0 315 71.7
FAN13G2797 Fragaria x ananassa HOM05D006919 ORTHO05D008705 2.5e-125 452.6 306 71.2
Sp1g35490 Schrenkiella parvula HOM05D006919 ORTHO05D008705 2.5e-125 452.6 315 70.2
Sopen03g037620 Solanum pennellii HOM05D006919 ORTHO05D008705 2.5e-125 452.6 316 71.5
Thhalv10012210m.g Eutrema salsugineum HOM05D006919 ORTHO05D008705 3.3e-125 452.2 315 70.5
Aa31LG10G5250 Aethionema arabicum HOM05D006919 ORTHO05D008705 1.6e-124 449.9 316 70.3
C06p03070 Brassica napus HOM05D006919 ORTHO05D008705 4.7e-124 448.4 315 70.2
BolC6t35427H Brassica oleracea HOM05D006919 ORTHO05D008705 4.7e-124 448.4 315 70.2
FAN04G0116 Fragaria x ananassa HOM05D006919 ORTHO05D008705 4.7e-124 448.4 307 71.3
A06p04410 Brassica napus HOM05D006919 ORTHO05D008705 6.1e-124 448.0 315 70.2
MSTRG.9306 Avicennia marina HOM05D006919 ORTHO05D008705 8.0e-124 447.6 318 70.8
Cc04_g06200 Coffea canephora HOM05D006919 ORTHO05D008705 1.0e-123 447.2 322 69.3
BcaB07g33748 Brassica carinata HOM05D006919 ORTHO05D008705 1.4e-123 446.8 315 70.2
Cpa.g.sc3.392 Carica papaya HOM05D006919 ORTHO05D008705 2.3e-123 446.0 335 68.7
BraA06t23646Z Brassica rapa HOM05D006919 ORTHO05D008705 3.0e-123 445.7 317 70.3
AUR62015799 Chenopodium quinoa HOM05D006919 ORTHO05D008705 1.5e-122 443.4 295 74.9
Ca_25336_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 7.5e-122 441.0 268 85.8
Ca_29640_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 7.5e-122 441.0 268 85.8
BcaC08g43045 Brassica carinata HOM05D006919 ORTHO05D008705 9.8e-122 440.7 321 68.5
arahy.Tifrunner.gnm1.ann1.54PB3V Arachis hypogaea HOM05D006919 ORTHO05D008705 2.2e-121 439.5 336 71.1
Oeu026273.1 Olea europaea HOM05D006919 ORTHO05D008705 2.2e-121 439.5 303 72.3
Hund01978 Selenicereus undatus HOM05D006919 ORTHO05D008705 4.9e-121 438.3 309 70.2
ECA233G0189 Erigeron canadensis HOM05D006919 ORTHO05D008705 7.0e-120 434.5 312 67.6
Solyc03g118660.3 Solanum lycopersicum HOM05D006919 ORTHO05D008705 1.6e-119 433.3 304 70.4
Ciclev10010588m.g Citrus clementina HOM05D006919 ORTHO05D008705 5.9e-119 431.4 310 69.7
PSO063G3076 Papaver somniferum HOM05D006919 ORTHO05D008705 1.3e-118 430.3 316 70.3
Lsat_1_v5_gn_8_720 Lactuca sativa HOM05D006919 ORTHO05D008705 1.2e-116 423.7 301 67.8
HanXRQChr05g0142681 Helianthus annuus HOM05D006919 ORTHO05D008705 3.6e-116 422.2 314 66.2
ATR1100G039 Amborella trichopoda HOM05D006919 ORTHO05D008705 8.0e-116 421.0 316 66.1
EL10Ac4g07782 Beta vulgaris HOM05D006919 ORTHO05D008705 1.3e-113 413.7 314 68.2
CSS0013537 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 1.3e-113 413.7 318 68.9
FAN18G1663 Fragaria x ananassa HOM05D006919 ORTHO05D008705 1.7e-113 413.3 306 68.0
PSO754G0044 Papaver somniferum HOM05D006919 ORTHO05D008705 3.7e-113 412.1 316 66.5
Manes.06G005400 Manihot esculenta HOM05D006919 ORTHO05D008705 4.6e-111 405.2 269 75.5
QL10p030230 Quercus lobata HOM05D006919 ORTHO05D008705 6.0e-111 404.8 298 69.5
Nitab4.5_0013135g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 1.9e-109 399.8 289 71.3
ClCG04G010590 Citrullus lanatus HOM05D006919 ORTHO05D008705 3.0e-102 375.9 314 64.3
HPP92_023812 Vanilla planifolia HOM05D006919 ORTHO05D008705 2.3e-99 366.3 315 60.6
MELO3C002137.2 Cucumis melo HOM05D006919 ORTHO05D008705 8.9e-99 364.4 254 72.8
Peaxi162Scf00314g00331 Petunia axillaris HOM05D006919 ORTHO05D008705 5.4e-96 355.1 245 72.2
Eucgr.B00878 Eucalyptus grandis HOM05D006919 ORTHO05D008705 1.3e-89 334.0 232 70.7
Mapoly0012s0164 Marchantia polymorpha HOM05D006919 ORTHO05D008705 1.3e-89 334.0 322 50.6
AagrBONN_evm.TU.Sc2ySwM_344.2286 Anthoceros agrestis HOM05D006919 ORTHO05D008705 4.6e-87 325.5 315 49.2
Nitab4.5_0012026g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 8.7e-86 321.2 207 77.3
vmacro16410 Vaccinium macrocarpon HOM05D006919 ORTHO05D008705 4.3e-85 318.9 256 66.0
Glyma.U031615 Glycine max HOM05D006919 ORTHO05D008705 8.1e-84 314.7 178 86.5
CDE08G0345 Ceratophyllum demersum HOM05D006919 ORTHO05D008705 2.0e-82 310.1 317 52.7
Pp3c1_6570 Physcomitrium patens HOM05D006919 ORTHO05D008705 3.2e-80 302.8 313 47.6
Pp3c2_29770 Physcomitrium patens HOM05D006919 ORTHO05D008705 2.7e-79 299.7 313 46.3
MBI09_g15241_MAGBIO Magnolia biondii HOM05D006919 ORTHO05D008705 5.1e-78 295.4 216 69.0
CARHR038160 Cardamine hirsuta HOM05D006919 ORTHO05D008705 3.3e-77 292.7 203 70.4
Eucgr.B00996 Eucalyptus grandis HOM05D006919 ORTHO05D008705 6.7e-70 268.5 232 59.9
AagrBONN_evm.TU.Sc2ySwM_228.5103 Anthoceros agrestis HOM05D006919 ORTHO05D008705 2.1e-68 263.5 309 42.1
Haze_18872 Corylus avellana HOM05D006919 ORTHO05D008705 2.8e-68 263.1 330 49.1
SMO143G0218 Selaginella moellendorffii HOM05D006919 ORTHO05D008705 2.6e-66 256.5 268 49.6
CBR_g44935 Chara braunii HOM05D006919 ORTHO05D008705 5.8e-58 228.8 339 39.8
Cfa019651 Carpinus fangiana HOM05D006919 ORTHO05D008705 1.0e-54 218.0 146 71.9
RcHm_v2.0_Chr5g0035741 Rosa chinensis HOM05D006919 ORTHO05D008705 3.3e-45 186.4 127 67.7
RcHm_v2.0_Chr7g0224581 Rosa chinensis HOM05D006919 ORTHO05D008705 2.8e-44 183.3 130 67.7
Rhsim12G0138200 Rhododendron simsii HOM05D006919 ORTHO05D008705 5.3e-43 179.1 228 48.2
arahy.Tifrunner.gnm1.ann1.248BIT Arachis hypogaea HOM05D006919 ORTHO05D008705 5.7e-37 159.1 103 79.6
Lj9A419G30 Lonicera japonica HOM05D006919 ORTHO05D008705 4.2e-32 142.9 246 37.4
SEGI_02358 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 3.8e-25 119.8 93 63.4
RcHm_v2.0_Chr7g0212051 Rosa chinensis HOM05D006919 ORTHO05D008705 6.5e-25 119.0 88 64.8
CBR_g74660 Chara braunii HOM05D006919 ORTHO05D008705 2.6e-21 107.1 212 36.3
Lj9C419T19 Lonicera japonica HOM05D006919 ORTHO05D008705 1.3e-20 104.8 70 72.9
SEGI_39350 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 1.2e-10 71.6 72 45.8
ECA233G3510 Erigeron canadensis HOM05D015936 ORTHO05D022524 1.4e-06 58.2 44 56.8
CSS0046000 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D004872 3.0e-06 57.0 43 65.1
Lj5g0003691 Lotus japonicus HOM05D006919 ORTHO05D236465 5.2e-06 56.2 36 77.8


User provided reference genes

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