Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g030600 Pisum sativum HOM05D006981 ORTHO05D008719 9.0e-41 169.9 88 100.0
Ca_25351_v3 Cicer arietinum L. HOM05D000367 ORTHO05D001438 1.9e-35 152.1 88 87.5
Medtr6g471020 Medicago truncatula HOM05D006981 ORTHO05D008719 2.4e-33 145.2 88 83.0
Glyma.09G140600 Glycine max HOM05D006981 ORTHO05D008719 1.7e-31 139.0 88 78.4
Glyma.16G194500 Glycine max HOM05D006981 ORTHO05D008719 1.7e-31 139.0 88 78.4
Lj2g0020265 Lotus japonicus HOM05D006981 ORTHO05D008719 8.4e-31 136.7 88 78.4
arahy.Tifrunner.gnm1.ann1.8WRD93 Arachis hypogaea HOM05D006981 ORTHO05D008719 7.1e-30 133.7 93 76.3
arahy.Tifrunner.gnm1.ann1.T9EWQW Arachis hypogaea HOM05D006981 ORTHO05D008719 9.3e-30 133.3 93 75.3
Phvul.004G118000 Phaseolus vulgaris HOM05D006981 ORTHO05D008719 1.6e-29 132.5 88 75.0
CiPaw.03G105000 Carya illinoinensis HOM05D006981 ORTHO05D008719 7.1e-22 107.1 95 61.1
VMungo0464G1391 Vigna mungo HOM05D006981 ORTHO05D008719 1.6e-21 105.9 63 81.0
Sc19g0001580 Simmondsia chinensis HOM05D006981 ORTHO05D008719 6.1e-21 104.0 80 63.8
CANSAT21G0349 Cannabis sativa HOM05D006981 ORTHO05D008719 7.9e-21 103.6 75 66.7
MELO3C005381.2 Cucumis melo HOM05D006981 ORTHO05D008719 1.0e-20 103.2 93 59.1
Eucgr.K00242 Eucalyptus grandis HOM05D006981 ORTHO05D008719 1.0e-20 103.2 94 62.8
CsaV3_5G005720 Cucumis sativus L. HOM05D006981 ORTHO05D008719 1.3e-20 102.8 93 60.2
QL09p014567 Quercus lobata HOM05D006981 ORTHO05D008719 1.3e-20 102.8 90 58.9
Gohir.D08G111300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 5.1e-20 100.9 74 68.9
Gorai.004G119200 Gossypium raimondii HOM05D006981 ORTHO05D008719 5.1e-20 100.9 74 68.9
Duzib205G0859 Durio zibethinus HOM05D006981 ORTHO05D008719 6.7e-20 100.5 94 59.6
PGR142G3060 Punica granatum HOM05D006981 ORTHO05D008719 8.7e-20 100.1 91 57.1
Thecc.03G174800 Theobroma cacao HOM05D006981 ORTHO05D008719 8.7e-20 100.1 93 58.1
Lalb_Chr19g0130931 Lupinus albus HOM05D006981 ORTHO05D008719 1.1e-19 99.8 64 78.1
COL.COLO4_14290 Corchorus olitorius HOM05D006981 ORTHO05D008719 1.5e-19 99.4 78 66.7
Manes.06G146000 Manihot esculenta HOM05D006981 ORTHO05D008719 1.5e-19 99.4 73 69.9
AUR62016001 Chenopodium quinoa HOM05D006981 ORTHO05D008719 2.5e-19 98.6 69 76.8
Cfa008306 Carpinus fangiana HOM05D006981 ORTHO05D008719 3.3e-19 98.2 70 72.9
Haze_13729 Corylus avellana HOM05D006981 ORTHO05D008719 3.3e-19 98.2 70 72.9
Actinidia32871 Actinidia chinensis HOM05D006981 ORTHO05D008719 4.3e-19 97.8 72 65.3
CAN.G28.6 Capsicum annuum HOM05D006981 ORTHO05D008719 4.3e-19 97.8 89 59.6
TWI14G0356 Tripterygium wilfordii HOM05D006981 ORTHO05D008719 5.7e-19 97.4 67 73.1
EL10Ac3g05672 Beta vulgaris HOM05D006981 ORTHO05D008719 7.4e-19 97.1 69 71.0
MD07G1267100 Malus domestica HOM05D006981 ORTHO05D008719 7.4e-19 97.1 89 56.2
Hund11756 Selenicereus undatus HOM05D006981 ORTHO05D008719 7.4e-19 97.1 68 72.1
MSTRG.27124 Avicennia marina HOM05D006981 ORTHO05D008719 9.7e-19 96.7 79 63.3
Cpa.g.sc107.36 Carica papaya HOM05D006981 ORTHO05D008719 1.3e-18 96.3 68 70.6
Ah.13g068510 Amaranthus hybridus HOM05D006981 ORTHO05D008719 1.6e-18 95.9 72 72.2
ECA233G5478 Erigeron canadensis HOM05D006981 ORTHO05D008719 1.6e-18 95.9 103 55.3
GSVIVG01010548001 Vitis vinifera HOM05D006981 ORTHO05D008719 1.6e-18 95.9 90 58.9
AUR62021209 Chenopodium quinoa HOM05D006981 ORTHO05D008719 2.2e-18 95.5 69 75.4
Gohir.A08G100300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 2.8e-18 95.1 80 62.5
Nn4g26525 Nelumbo nucifera HOM05D006981 ORTHO05D008719 3.7e-18 94.7 80 61.2
PGSC0003DMG400015647 Solanum tuberosum HOM05D006981 ORTHO05D008719 3.7e-18 94.7 77 62.3
Duzib084G0697 Durio zibethinus HOM05D006981 ORTHO05D008719 4.8e-18 94.4 94 58.5
FvH4_7g29270 Fragaria vesca HOM05D006981 ORTHO05D008719 6.3e-18 94.0 73 65.8
Nitab4.5_0000080g0060 Nicotiana tabacum HOM05D006981 ORTHO05D008719 6.3e-18 94.0 88 61.4
Sopen06g017220 Solanum pennellii HOM05D006981 ORTHO05D008719 6.3e-18 94.0 77 62.3
Ciclev10006231m.g Citrus clementina HOM05D006981 ORTHO05D008719 8.2e-18 93.6 70 70.0
FAN03G1713 Fragaria x ananassa HOM05D006981 ORTHO05D008719 8.2e-18 93.6 73 65.8
FAN10G3446 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.4e-17 92.8 73 65.8
vmacro06697 Vaccinium macrocarpon HOM05D006981 ORTHO05D008719 1.4e-17 92.8 83 57.8
FAN03G1998 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.8e-17 92.4 73 64.4
Sed0011448 Sechium edule HOM05D006981 ORTHO05D008719 1.8e-17 92.4 80 58.8
Potri.015G140200 Populus trichocarpa HOM05D006981 ORTHO05D008719 2.4e-17 92.0 86 59.3
Hma1.2p1_0270F.1_g108180 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 3.1e-17 91.7 68 67.6
CSS0044451 Camellia sinensis var. sinensis HOM05D006981 ORTHO05D008719 5.3e-17 90.9 72 62.5
unitig_747.g21767 Utricularia gibba HOM05D006981 ORTHO05D008719 5.3e-17 90.9 79 57.0
Manes.09G002400 Manihot esculenta HOM05D006981 ORTHO05D008719 6.9e-17 90.5 78 65.4
BcaC04g20601 Brassica carinata HOM05D006981 ORTHO05D008719 9.0e-17 90.1 64 71.9
C09p41630 Brassica napus HOM05D006981 ORTHO05D008719 9.0e-17 90.1 64 71.9
BolC9t57050H Brassica oleracea HOM05D006981 ORTHO05D008719 9.0e-17 90.1 64 71.9
ClCG01G005500 Citrullus lanatus HOM05D003170 ORTHO05D008719 9.0e-17 90.1 92 51.1
A10p09920 Brassica napus HOM05D006981 ORTHO05D008719 1.2e-16 89.7 64 73.4
BraA10t43072Z Brassica rapa HOM05D006981 ORTHO05D008719 1.2e-16 89.7 64 73.4
Sabra15G0150900 Salix brachista HOM05D006981 ORTHO05D008719 1.2e-16 89.7 73 67.1
SGA_v2.0_scaffold2G01066 Striga asiatica HOM05D006981 ORTHO05D008719 1.5e-16 89.4 81 59.3
CDE08G1025 Ceratophyllum demersum HOM05D006981 ORTHO05D008719 2.0e-16 89.0 67 65.7
FAN06G1994 Fragaria x ananassa HOM05D006981 ORTHO05D008719 2.0e-16 89.0 72 65.3
Migut.F00354 Erythranthe guttata HOM05D006981 ORTHO05D008719 2.6e-16 88.6 86 55.8
HanXRQChr08g0209251 Helianthus annuus HOM05D006981 ORTHO05D008719 2.6e-16 88.6 81 59.3
RcHm_v2.0_Chr1g0377021 Rosa chinensis HOM05D006981 ORTHO05D008719 2.6e-16 88.6 64 70.3
FAN01G2034 Fragaria x ananassa HOM05D006981 ORTHO05D008719 3.4e-16 88.2 87 58.6
SalBow4G1422 Salvia bowleyana HOM05D006981 ORTHO05D008719 3.4e-16 88.2 65 69.2
SalBow4G2131 Salvia bowleyana HOM05D006981 ORTHO05D008719 3.4e-16 88.2 65 69.2
THA.LOC104825097 Tarenaya hassleriana HOM05D006981 ORTHO05D008719 3.4e-16 88.2 73 67.1
TAR375G0811 Trochodendron aralioides HOM05D006981 ORTHO05D008719 3.4e-16 88.2 68 67.6
HPP92_020865 Vanilla planifolia HOM05D006981 ORTHO05D008719 3.4e-16 88.2 74 56.8
HPP92_028124 Vanilla planifolia HOM05D006981 ORTHO05D008719 3.4e-16 88.2 74 56.8
Cc02_g03150 Coffea canephora HOM05D006981 ORTHO05D008719 4.5e-16 87.8 91 52.7
Aa31LG3G8600 Aethionema arabicum HOM05D006981 ORTHO05D008719 5.9e-16 87.4 63 66.7
BcaB08g35575 Brassica carinata HOM05D006981 ORTHO05D008719 5.9e-16 87.4 64 70.3
Thhalv10015042m.g Eutrema salsugineum HOM05D006981 ORTHO05D008719 7.7e-16 87.0 64 70.3
DCAR_009354 Daucus carota HOM05D006981 ORTHO05D008719 1.3e-15 86.3 70 61.4
Atru.chr1.479 Acer truncatum HOM05D006981 ORTHO05D008719 1.7e-15 85.9 69 66.7
Carub.0008s1231 Capsella rubella HOM05D006981 ORTHO05D008719 1.7e-15 85.9 63 69.8
Sp6g14470 Schrenkiella parvula HOM05D006981 ORTHO05D008719 1.7e-15 85.9 64 70.3
Lj1C995G12 Lonicera japonica HOM05D006981 ORTHO05D008719 2.2e-15 85.5 94 53.2
Nitab4.5_0019580g0020 Nicotiana tabacum HOM05D006981 ORTHO05D008719 2.2e-15 85.5 68 67.6
Oeu056238.2 Olea europaea HOM05D006981 ORTHO05D008719 2.2e-15 85.5 70 61.4
Peaxi162Scf00040g00323 Petunia axillaris HOM05D006981 ORTHO05D008719 2.2e-15 85.5 68 64.7
MBI17_g21049_MAGBIO Magnolia biondii HOM05D006981 ORTHO05D008719 2.9e-15 85.1 74 56.8
Aqoxy7G00390 Aquilegia oxysepala HOM05D006981 ORTHO05D008719 5.0e-15 84.3 85 55.3
Lsat_1_v5_gn_8_8340 Lactuca sativa HOM05D006981 ORTHO05D008719 5.0e-15 84.3 85 54.1
PSO478G2189 Papaver somniferum HOM05D006981 ORTHO05D008719 6.5e-15 84.0 89 49.4
PSO782G4575 Papaver somniferum HOM05D006981 ORTHO05D008719 6.5e-15 84.0 88 50.0
Pp3c14_5260 Physcomitrium patens HOM05D006981 ORTHO05D008719 6.5e-15 84.0 85 50.6
Prupe.2G292700 Prunus persica HOM05D006981 ORTHO05D008719 6.5e-15 84.0 75 57.3
Solyc06g051300.3 Solanum lycopersicum HOM05D006981 ORTHO05D008719 1.1e-14 83.2 90 52.2
CARHR265140 Cardamine hirsuta HOM05D006981 ORTHO05D008719 2.5e-14 82.0 62 67.7
SEGI_30853 Sequoiadendron giganteum HOM05D006981 ORTHO05D008719 2.5e-14 82.0 91 51.6
Zm00001eb309380 Zea mays HOM05D006981 ORTHO05D008719 2.5e-14 82.0 73 57.5
AL8G26600 Arabidopsis lyrata HOM05D006981 ORTHO05D008719 3.2e-14 81.6 61 70.5
AT5G52220 Arabidopsis thaliana HOM05D006981 ORTHO05D008719 3.2e-14 81.6 61 70.5
FAN06G2660 Fragaria x ananassa HOM05D006981 ORTHO05D008719 4.2e-14 81.3 72 62.5
Mapoly0027s0013 Marchantia polymorpha HOM05D006981 ORTHO05D008719 7.2e-14 80.5 86 48.8
SMO141G0174 Selaginella moellendorffii HOM05D006981 ORTHO05D008719 3.6e-13 78.2 64 60.9
AagrBONN_evm.TU.Sc2ySwM_369.83 Anthoceros agrestis HOM05D006981 ORTHO05D008719 3.9e-12 74.7 86 44.2
SHI13798 Sapria himalayana HOM05D006981 ORTHO05D008719 2.0e-11 72.4 70 55.7
Cre06.g281750 Chlamydomonas reinhardtii HOM05D006981 ORTHO05D008719 3.7e-10 68.2 72 48.6
CBR_g4805 Chara braunii HOM05D006981 ORTHO05D008719 3.1e-09 65.1 92 39.1
Manes.14G129556 Manihot esculenta HOM05D006981 ORTHO05D008719 1.0e-07 60.1 39 71.8
PRCOL_00004746 Prasinoderma coloniale HOM05D006981 ORTHO05D008719 1.4e-06 56.2 72 43.1


User provided reference genes

Program Settings