Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g027680 Pisum sativum HOM05D007960 ORTHO05D010026 1.2e-115 419.9 217 100.0
Medtr2g056070 Medicago truncatula HOM05D007960 ORTHO05D010026 6.0e-46 188.3 124 79.0
TPR.G31006 Trifolium pratense HOM05D007960 ORTHO05D010026 1.8e-45 186.8 128 78.9
Lj1g0016835 Lotus japonicus HOM05D007960 ORTHO05D010026 7.6e-33 144.8 97 78.4
Glyma.17G123900 Glycine max HOM05D007960 ORTHO05D010026 1.9e-31 140.2 122 63.9
Ca_02635_v3 Cicer arietinum L. HOM05D007960 ORTHO05D010026 5.5e-31 138.7 80 85.0
Ca_30215_v3 Cicer arietinum L. HOM05D007960 ORTHO05D010026 5.5e-31 138.7 80 85.0
VMungo1215G0525 Vigna mungo HOM05D007960 ORTHO05D010026 3.5e-30 136.0 111 63.1
Phvul.003G179700 Phaseolus vulgaris HOM05D007960 ORTHO05D010026 2.5e-28 129.8 121 57.9
Lalb_Chr13g0302531 Lupinus albus HOM05D007960 ORTHO05D010026 7.2e-23 111.7 90 67.8
QL10p022177 Quercus lobata HOM05D007960 ORTHO05D010026 8.7e-21 104.8 123 48.0
Glyma.05G015600 Glycine max HOM05D007960 ORTHO05D010026 1.5e-20 104.0 105 58.1
Haze_18568 Corylus avellana HOM05D007960 ORTHO05D010026 5.7e-20 102.1 105 54.3
Haze_18570 Corylus avellana HOM05D007960 ORTHO05D010026 5.7e-20 102.1 105 54.3
Hma1.2p1_0340F.1_g130110 Hydrangea macrophylla HOM05D007960 ORTHO05D010026 1.1e-18 97.8 109 51.4
CiPaw.15G122900 Carya illinoinensis HOM05D007960 ORTHO05D010026 2.4e-18 96.7 121 48.8
Ciclev10024471m.g Citrus clementina HOM05D007960 ORTHO05D010026 3.1e-18 96.3 125 48.0
Cc04_g07760 Coffea canephora HOM05D007960 ORTHO05D010026 5.9e-17 92.0 94 48.9
Nn3g17652 Nelumbo nucifera HOM05D007960 ORTHO05D010026 7.7e-17 91.7 110 47.3
Atru.chr9.701 Acer truncatum HOM05D007960 ORTHO05D010026 1.1e-15 87.8 106 48.1
MD14G1219300 Malus domestica HOM05D007960 ORTHO05D010026 1.4e-15 87.4 107 53.3
TAR371G0138 Trochodendron aralioides HOM05D007960 ORTHO05D010026 1.4e-15 87.4 111 45.9
CARHR067210 Cardamine hirsuta HOM05D007960 ORTHO05D010026 1.9e-15 87.0 130 43.8
Cfa019847 Carpinus fangiana HOM05D007960 ORTHO05D010026 2.5e-15 86.7 114 50.0
Solyc03g114430.1 Solanum lycopersicum HOM05D007960 ORTHO05D010026 4.2e-15 85.9 90 52.2
Gohir.D03G100500 Gossypium hirsutum HOM05D007960 ORTHO05D010026 9.4e-15 84.7 132 41.7
Gorai.003G106000 Gossypium raimondii HOM05D007960 ORTHO05D010026 9.4e-15 84.7 132 41.7
Sopen03g033530 Solanum pennellii HOM05D007960 ORTHO05D010026 1.2e-14 84.3 88 53.4
Thecc.03G114600 Theobroma cacao HOM05D007960 ORTHO05D010026 2.7e-14 83.2 111 45.9
A07p39920 Brassica napus HOM05D007960 ORTHO05D010026 4.6e-14 82.4 133 41.4
BraA07t31538Z Brassica rapa HOM05D007960 ORTHO05D010026 4.6e-14 82.4 133 41.4
Carub.0002s2086 Capsella rubella HOM05D007960 ORTHO05D010026 6.1e-14 82.0 101 47.5
Cpa.g.sc13.82 Carica papaya HOM05D007960 ORTHO05D010026 6.1e-14 82.0 101 53.5
AT1G74055 Arabidopsis thaliana HOM05D007960 ORTHO05D010026 1.4e-13 80.9 133 43.6
C06p48150 Brassica napus HOM05D007960 ORTHO05D010026 1.4e-13 80.9 133 42.1
Gohir.A03G074200 Gossypium hirsutum HOM05D007960 ORTHO05D010026 1.4e-13 80.9 115 45.2
BcaC08g46805 Brassica carinata HOM05D007960 ORTHO05D010026 1.8e-13 80.5 133 41.4
BolC6t39852H Brassica oleracea HOM05D007960 ORTHO05D010026 1.8e-13 80.5 133 41.4
BcaC08g46834 Brassica carinata HOM05D007960 ORTHO05D010026 2.3e-13 80.1 133 40.6
Sp5g29280 Schrenkiella parvula HOM05D007960 ORTHO05D010026 2.3e-13 80.1 120 40.8
AL2G33950 Arabidopsis lyrata HOM05D007960 ORTHO05D010026 3.0e-13 79.7 133 40.6
Thhalv10019432m.g Eutrema salsugineum HOM05D007960 ORTHO05D010026 3.0e-13 79.7 133 40.6
Nitab4.5_0004342g0110 Nicotiana tabacum HOM05D007960 ORTHO05D010026 1.1e-12 77.8 72 56.9
THA.LOC104812118 Tarenaya hassleriana HOM05D007960 ORTHO05D010026 1.5e-12 77.4 118 46.6
Lalb_Chr12g0197501 Lupinus albus HOM05D007960 ORTHO05D010026 7.4e-12 75.1 83 55.4
Nitab4.5_0000646g0060 Nicotiana tabacum HOM05D007960 ORTHO05D010026 7.4e-12 75.1 75 56.0
Peaxi162Scf00017g03010 Petunia axillaris HOM05D007960 ORTHO05D001491 9.7e-12 74.7 97 47.4
FAN13G1649 Fragaria x ananassa HOM05D000227 ORTHO05D001491 1.7e-11 73.9 99 48.5
Aa31LG4G4360 Aethionema arabicum HOM05D007960 ORTHO05D010026 2.2e-11 73.6 123 42.3
Manes.01G022400 Manihot esculenta HOM05D007960 ORTHO05D010026 2.2e-11 73.6 130 40.8
PGSC0003DMG400041876 Solanum tuberosum HOM05D007960 ORTHO05D010026 2.8e-11 73.2 85 50.6
ClCG04G011400 Citrullus lanatus HOM05D007960 ORTHO05D010026 3.7e-11 72.8 101 44.6
Dinv38606 Davidia involucrata HOM05D000227 ORTHO05D001491 6.3e-11 72.0 73 53.4
RcHm_v2.0_Chr7g0184281 Rosa chinensis HOM05D007960 ORTHO05D010026 3.1e-10 69.7 114 46.5
Sc04g0003840 Simmondsia chinensis HOM05D007960 ORTHO05D010026 4.1e-10 69.3 114 41.2
FAN18G0932 Fragaria x ananassa HOM05D000227 ORTHO05D001491 6.9e-10 68.6 129 40.3
Rhsim11G0054500 Rhododendron simsii HOM05D007960 ORTHO05D010026 1.2e-09 67.8 116 44.8
Sc04g0003850 Simmondsia chinensis HOM05D007960 ORTHO05D010026 2.0e-09 67.0 114 40.4
Prupe.5G214000 Prunus persica HOM05D007960 ORTHO05D010026 2.6e-09 66.6 99 49.5
BraA07t30596Z Brassica rapa HOM05D007960 ORTHO05D010026 5.9e-09 65.5 111 38.7
Lsat_1_v5_gn_1_15660 Lactuca sativa HOM05D007960 ORTHO05D010026 7.7e-09 65.1 102 44.1
PSO782G5681 Papaver somniferum HOM05D007960 ORTHO05D010026 7.7e-09 65.1 73 42.5
Rhsim08G0149000 Rhododendron simsii HOM05D007960 ORTHO05D010026 1.0e-08 64.7 110 42.7
Ah.11g047280 Amaranthus hybridus HOM05D007960 ORTHO05D010026 1.3e-08 64.3 114 41.2
PSO063G1775 Papaver somniferum HOM05D007960 ORTHO05D010026 1.3e-08 64.3 98 36.7
EL10Ac5g11226 Beta vulgaris HOM05D007960 ORTHO05D010026 5.0e-08 62.4 114 39.5
Duzib205G0322 Durio zibethinus HOM05D007960 ORTHO05D010026 8.5e-08 61.6 55 52.7
Sed0018526 Sechium edule HOM05D007960 ORTHO05D010026 1.1e-07 61.2 73 45.2
AUR62036925 Chenopodium quinoa HOM05D007960 ORTHO05D010026 1.9e-07 60.5 59 55.9
Sc04g0003950 Simmondsia chinensis HOM05D007960 ORTHO05D010026 1.9e-07 60.5 114 39.5
ATR0730G198 Amborella trichopoda HOM05D007960 ORTHO05D010026 1.6e-06 57.4 64 45.3
COL.COLO4_32178 Corchorus olitorius HOM05D007960 ORTHO05D010026 1.6e-06 57.4 54 48.1
CANSAT80G0727 Cannabis sativa HOM05D007960 ORTHO05D010026 6.1e-06 55.5 114 39.5
Dinv36868 Davidia involucrata HOM05D007960 ORTHO05D010026 6.1e-06 55.5 118 38.1


User provided reference genes

Program Settings