Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g025760 Pisum sativum HOM05D004174 ORTHO05D004624 6.3e-249 863.6 425 100.0
Medtr2g054680 Medicago truncatula HOM05D004174 ORTHO05D004624 9.5e-213 743.4 430 86.0
TPR.G31095 Trifolium pratense HOM05D004174 ORTHO05D004624 5.4e-208 727.6 441 83.4
Ca_03159_v3 Cicer arietinum L. HOM05D004174 ORTHO05D004624 5.0e-206 721.1 446 82.5
VMungo1309G2067 Vigna mungo HOM05D004174 ORTHO05D004624 3.8e-185 651.7 417 77.7
Phvul.009G197200 Phaseolus vulgaris HOM05D004174 ORTHO05D004624 8.4e-185 650.6 402 80.8
Glyma.06G216700 Glycine max HOM05D004174 ORTHO05D004624 7.8e-183 644.0 436 78.0
Lj1g0010752 Lotus japonicus HOM05D004174 ORTHO05D004624 1.3e-180 636.7 439 76.3
CiPaw.03G241700 Carya illinoinensis HOM05D004174 ORTHO05D004624 1.1e-179 633.6 447 72.7
Lalb_Chr23g0275331 Lupinus albus HOM05D004174 ORTHO05D004624 1.4e-176 623.2 448 71.9
FAN19G0954 Fragaria x ananassa HOM05D004174 ORTHO05D004624 1.6e-175 619.8 444 71.8
Haze_25614 Corylus avellana HOM05D004174 ORTHO05D004624 2.7e-175 619.0 443 72.2
FvH4_1g03600 Fragaria vesca HOM05D004174 ORTHO05D004624 3.5e-175 618.6 444 71.6
Cfa003346 Carpinus fangiana HOM05D004174 ORTHO05D004624 7.9e-175 617.5 443 71.8
RcHm_v2.0_Chr2g0089131 Rosa chinensis HOM05D004174 ORTHO05D004624 1.3e-174 616.7 423 73.8
CANSAT11G0280 Cannabis sativa HOM05D004174 ORTHO05D004624 3.9e-174 615.1 439 72.0
Prupe.7G239600 Prunus persica HOM05D004174 ORTHO05D004624 3.9e-174 615.1 443 71.6
FAN28G1355 Fragaria x ananassa HOM05D004174 ORTHO05D004624 5.1e-174 614.8 443 71.1
FAN23G0992 Fragaria x ananassa HOM05D004174 ORTHO05D004624 7.4e-173 610.9 444 71.2
Thecc.09G123000 Theobroma cacao HOM05D004174 ORTHO05D004624 2.8e-172 609.0 442 71.7
Dinv36548 Davidia involucrata HOM05D004174 ORTHO05D004624 3.7e-172 608.6 404 76.2
Atru.chr7.1197 Acer truncatum HOM05D004174 ORTHO05D004624 8.1e-172 607.4 434 71.7
TWI34G0924 Tripterygium wilfordii HOM05D004174 ORTHO05D004624 1.8e-171 606.3 438 72.4
COL.COLO4_05761 Corchorus olitorius HOM05D004174 ORTHO05D004624 1.2e-170 603.6 411 74.7
Gohir.A13G199200 Gossypium hirsutum HOM05D004174 ORTHO05D004624 3.4e-170 602.1 448 70.3
Gorai.013G233600 Gossypium raimondii HOM05D004174 ORTHO05D004624 3.4e-170 602.1 449 70.4
Hma1.2p1_0665F.1_g199150 Hydrangea macrophylla HOM05D004174 ORTHO05D004624 3.4e-170 602.1 442 69.9
Gohir.D13G204700 Gossypium hirsutum HOM05D004174 ORTHO05D004624 9.9e-170 600.5 449 70.2
Actinidia26403 Actinidia chinensis HOM05D004174 ORTHO05D004624 1.3e-169 600.1 405 73.6
QL02p087765 Quercus lobata HOM05D004174 ORTHO05D004624 8.4e-169 597.4 408 74.0
Nn8g39387 Nelumbo nucifera HOM05D004174 ORTHO05D004624 1.4e-168 596.7 441 71.2
Sed0019119 Sechium edule HOM05D004174 ORTHO05D004624 2.4e-168 595.9 422 70.9
FAN26G3217 Fragaria x ananassa HOM05D004174 ORTHO05D004624 3.2e-168 595.5 442 69.9
MD00G1107300 Malus domestica HOM05D004174 ORTHO05D004624 3.2e-168 595.5 443 70.0
Eucgr.C04181 Eucalyptus grandis HOM05D004174 ORTHO05D004624 4.2e-168 595.1 406 73.9
Manes.14G130500 Manihot esculenta HOM05D004174 ORTHO05D004624 2.1e-167 592.8 412 73.5
Actinidia07434 Actinidia chinensis HOM05D004174 ORTHO05D004624 3.5e-167 592.0 439 69.0
MD02G1035600 Malus domestica HOM05D004174 ORTHO05D004624 1.8e-166 589.7 450 69.8
TAR383G0558 Trochodendron aralioides HOM05D004174 ORTHO05D004624 1.8e-166 589.7 397 75.6
Manes.06G050000 Manihot esculenta HOM05D004174 ORTHO05D004624 5.1e-166 588.2 412 72.3
EL10Ac8g18616 Beta vulgaris HOM05D004174 ORTHO05D004624 6.7e-166 587.8 424 69.1
Ciclev10008313m.g Citrus clementina HOM05D004174 ORTHO05D004624 8.7e-166 587.4 421 70.1
Potri.018G070400 Populus trichocarpa HOM05D004174 ORTHO05D004624 8.7e-166 587.4 415 71.8
ClCG11G002850 Citrullus lanatus HOM05D004174 ORTHO05D004624 2.5e-165 585.9 421 70.1
TWI32G1270 Tripterygium wilfordii HOM05D004174 ORTHO05D004624 3.3e-165 585.5 441 68.7
vmacro06177 Vaccinium macrocarpon HOM05D004174 ORTHO05D004624 9.6e-165 583.9 440 68.4
Lalb_Chr08g0234871 Lupinus albus HOM05D004174 ORTHO05D004624 1.3e-164 583.6 404 73.0
THA.LOC104799651 Tarenaya hassleriana HOM05D004174 ORTHO05D004624 2.8e-164 582.4 386 72.3
Aqoxy7G02096 Aquilegia oxysepala HOM05D004174 ORTHO05D004624 8.2e-164 580.9 439 68.3
MELO3C004525.2 Cucumis melo HOM05D004174 ORTHO05D004624 1.1e-163 580.5 419 69.9
Potri.006G154200 Populus trichocarpa HOM05D004174 ORTHO05D004624 1.4e-163 580.1 408 71.6
PGR102G0881 Punica granatum HOM05D004174 ORTHO05D004624 1.4e-163 580.1 411 70.8
Duzib187G0531 Durio zibethinus HOM05D004174 ORTHO05D004624 5.3e-163 578.2 430 70.7
Aa31LG8G2170 Aethionema arabicum HOM05D004174 ORTHO05D004624 9.0e-163 577.4 435 67.6
Duzib150G0384 Durio zibethinus HOM05D004174 ORTHO05D004624 9.0e-163 577.4 409 71.6
Sabra18G0061500 Salix brachista HOM05D004174 ORTHO05D004624 4.5e-162 575.1 447 67.8
Hund09144 Selenicereus undatus HOM05D004174 ORTHO05D004624 5.8e-162 574.7 442 67.2
CsaV3_2G002690 Cucumis sativus L. HOM05D004174 ORTHO05D004624 7.6e-162 574.3 437 67.7
CARHR192760 Cardamine hirsuta HOM05D004174 ORTHO05D004624 1.0e-161 573.9 444 66.7
Carub.0006s1845 Capsella rubella HOM05D004174 ORTHO05D004624 1.7e-161 573.2 438 67.8
AT5G20070 Arabidopsis thaliana HOM05D004174 ORTHO05D004624 2.9e-161 572.4 441 66.2
MSTRG.19607 Avicennia marina HOM05D004174 ORTHO05D004624 6.5e-161 571.2 378 73.0
Cc06_g08790 Coffea canephora HOM05D004174 ORTHO05D004624 6.5e-161 571.2 385 73.0
DCAR_017828 Daucus carota HOM05D004174 ORTHO05D004624 6.5e-161 571.2 405 69.9
THA.LOC104811038 Tarenaya hassleriana HOM05D004174 ORTHO05D004624 8.4e-161 570.9 431 67.5
AL6G31620 Arabidopsis lyrata HOM05D004174 ORTHO05D004624 1.1e-160 570.5 444 66.4
Thhalv10013566m.g Eutrema salsugineum HOM05D004174 ORTHO05D004624 1.1e-160 570.5 443 65.7
Sc18g0000710 Simmondsia chinensis HOM05D004174 ORTHO05D004624 1.6e-159 566.6 378 73.5
Sp6g24340 Schrenkiella parvula HOM05D004174 ORTHO05D004624 4.6e-159 565.1 438 66.0
Peaxi162Scf02490g00007 Petunia axillaris HOM05D004174 ORTHO05D004624 1.8e-158 563.1 425 67.3
BcaC03g13730 Brassica carinata HOM05D004174 ORTHO05D004624 2.3e-158 562.8 407 69.8
A02p06020 Brassica napus HOM05D004174 ORTHO05D004624 3.9e-158 562.0 405 69.9
BraA02t05553Z Brassica rapa HOM05D004174 ORTHO05D004624 3.9e-158 562.0 405 69.9
COL.COLO4_17917 Corchorus olitorius HOM05D004174 ORTHO05D004624 8.7e-158 560.8 393 72.5
SGA_v2.0_scaffold229G43324 Striga asiatica HOM05D004174 ORTHO05D004624 3.3e-157 558.9 413 69.2
BcaB01g04811 Brassica carinata HOM05D004174 ORTHO05D004624 9.7e-157 557.4 435 66.2
Migut.J01169 Erythranthe guttata HOM05D004174 ORTHO05D004624 9.7e-157 557.4 399 70.2
Oeu058056.1 Olea europaea HOM05D004174 ORTHO05D004624 2.2e-156 556.2 406 69.7
arahy.Tifrunner.gnm1.ann1.SBVG8E Arachis hypogaea HOM05D004174 ORTHO05D004624 4.8e-156 555.1 435 67.6
MD15G1175700 Malus domestica HOM05D004174 ORTHO05D004624 3.1e-155 552.4 489 62.4
BolC3t13612H Brassica oleracea HOM05D004174 ORTHO05D004624 4.1e-155 552.0 429 65.0
BcaB05g22875 Brassica carinata HOM05D004174 ORTHO05D004624 6.9e-155 551.2 404 68.6
PSO455G0049 Papaver somniferum HOM05D004174 ORTHO05D004624 2.0e-154 549.7 416 68.5
Sopen06g031500 Solanum pennellii HOM05D004174 ORTHO05D004624 2.0e-154 549.7 407 68.8
PGSC0003DMG400024321 Solanum tuberosum HOM05D004174 ORTHO05D004624 2.0e-154 549.7 405 69.1
CSS0035220 Camellia sinensis var. sinensis HOM05D004174 ORTHO05D004624 3.4e-154 548.9 394 71.8
arahy.Tifrunner.gnm1.ann1.E6UBTJ Arachis hypogaea HOM05D004174 ORTHO05D004624 4.5e-154 548.5 448 66.7
BNapus_Darmor_BZH_scaffold_38p01820 Brassica napus HOM05D004174 ORTHO05D004624 5.9e-154 548.1 405 68.9
Lsat_1_v5_gn_8_58900 Lactuca sativa HOM05D004174 ORTHO05D004624 7.6e-154 547.7 392 69.6
SalBow3G2402 Salvia bowleyana HOM05D004174 ORTHO05D004624 7.6e-154 547.7 416 68.3
C03p11380 Brassica napus HOM05D004174 ORTHO05D004624 1.0e-153 547.4 429 64.8
PSO170G6838 Papaver somniferum HOM05D004174 ORTHO05D004624 1.0e-153 547.4 414 68.8
Nitab4.5_0006698g0010 Nicotiana tabacum HOM05D004174 ORTHO05D004624 1.3e-153 547.0 446 64.8
HanXRQChr12g0368841 Helianthus annuus HOM05D004174 ORTHO05D004624 3.8e-153 545.4 408 68.1
TPR.G10694 Trifolium pratense HOM05D004174 ORTHO05D004624 3.8e-153 545.4 431 66.6
MBI04_g24208_MAGBIO Magnolia biondii HOM05D004174 ORTHO05D004624 6.5e-153 544.7 433 66.1
A03p09800 Brassica napus HOM05D004174 ORTHO05D004624 1.9e-152 543.1 414 66.7
BraA03t10295Z Brassica rapa HOM05D004174 ORTHO05D004624 1.9e-152 543.1 414 66.7
Glyma.17G116600 Glycine max HOM05D004174 ORTHO05D004624 3.2e-152 542.3 432 67.4
Solyc06g075080.4 Solanum lycopersicum HOM05D004174 ORTHO05D004624 5.5e-152 541.6 387 70.0
Medtr4g113990 Medicago truncatula HOM05D004174 ORTHO05D004624 1.6e-151 540.0 391 71.4
CAN.G1966.1 Capsicum annuum HOM05D004174 ORTHO05D004624 1.0e-150 537.3 421 66.3
Psat4g040360 Pisum sativum HOM05D004174 ORTHO05D004624 1.4e-150 537.0 393 70.2
Nitab4.5_0000106g0230 Nicotiana tabacum HOM05D004174 ORTHO05D004624 5.7e-149 531.6 426 64.8
Phvul.003G162700 Phaseolus vulgaris HOM05D004174 ORTHO05D004624 7.4e-149 531.2 390 70.8
HanXRQChr06g0180241 Helianthus annuus HOM05D004174 ORTHO05D004624 9.7e-149 530.8 383 68.7
Lalb_Chr07g0178801 Lupinus albus HOM05D004174 ORTHO05D004624 2.8e-148 529.3 386 68.7
HanXRQChr03g0062501 Helianthus annuus HOM05D004174 ORTHO05D004624 1.1e-147 527.3 389 69.7
GSVIVG01015501001 Vitis vinifera HOM05D004174 ORTHO05D004624 2.6e-146 522.7 307 82.4
VMungo1215G2625 Vigna mungo HOM05D004174 ORTHO05D004624 5.9e-146 521.5 388 69.8
DCAR_009201 Daucus carota HOM05D004174 ORTHO05D004624 4.2e-144 515.4 381 66.7
Lsat_1_v5_gn_7_42401 Lactuca sativa HOM05D004174 ORTHO05D004624 1.2e-143 513.8 386 66.8
Gohir.D08G260000 Gossypium hirsutum HOM05D004174 ORTHO05D004624 2.1e-143 513.1 390 67.4
MELO3C026643.2 Cucumis melo HOM05D004174 ORTHO05D004624 3.6e-143 512.3 391 66.2
HPP92_000685 Vanilla planifolia HOM05D004174 ORTHO05D004624 3.6e-143 512.3 379 68.1
Gorai.004G277900 Gossypium raimondii HOM05D004174 ORTHO05D004624 6.1e-143 511.5 418 65.1
HPP92_000661 Vanilla planifolia HOM05D004174 ORTHO05D004624 2.3e-142 509.6 390 66.9
Zm00001eb377430 Zea mays HOM05D004174 ORTHO05D004624 6.7e-142 508.1 405 65.2
ATR1156G006 Amborella trichopoda HOM05D004174 ORTHO05D004624 8.8e-142 507.7 415 64.6
Rhsim03G0246500 Rhododendron simsii HOM05D004174 ORTHO05D004624 2.6e-141 506.1 346 73.7
AUR62033476 Chenopodium quinoa HOM05D004174 ORTHO05D004624 9.1e-139 497.7 417 62.1
Os06g0141166 Oryza sativa ssp. japonica HOM05D004174 ORTHO05D004624 2.2e-137 493.0 416 62.0
Sed0008859 Sechium edule HOM05D004174 ORTHO05D004624 8.5e-137 491.1 389 64.0
CDE02G3646 Ceratophyllum demersum HOM05D004174 ORTHO05D004624 2.1e-135 486.5 390 64.4
ECA240G3275 Erigeron canadensis HOM05D004174 ORTHO05D004624 1.7e-132 476.9 326 72.7
Dinv41532 Davidia involucrata HOM05D004174 ORTHO05D004624 1.8e-131 473.4 345 71.3
FAN26G0665 Fragaria x ananassa HOM05D004174 ORTHO05D004624 1.5e-125 453.8 263 82.1
ClCG06G010920 Citrullus lanatus HOM05D004174 ORTHO05D004624 2.8e-124 449.5 392 57.7
SEGI_17043 Sequoiadendron giganteum HOM05D004174 ORTHO05D004624 5.0e-121 438.7 387 59.9
Ah.14g080300 Amaranthus hybridus HOM05D004174 ORTHO05D004624 3.3e-112 409.5 262 74.4
Ah.02g124290 Amaranthus hybridus HOM05D004174 ORTHO05D004624 4.2e-112 409.1 250 77.6
Lj7A632G45 Lonicera japonica HOM05D004174 ORTHO05D004624 7.8e-106 388.3 279 70.3
Lj4g0002160 Lotus japonicus HOM05D004174 ORTHO05D004624 9.8e-101 371.3 281 67.3
AagrBONN_evm.TU.Sc2ySwM_368.699 Anthoceros agrestis HOM05D004174 ORTHO05D004624 3.0e-97 359.8 407 50.4
Gohir.A08G239300 Gossypium hirsutum HOM05D004174 ORTHO05D004624 1.2e-95 354.4 282 64.9
SEGI_09002 Sequoiadendron giganteum HOM05D004174 ORTHO05D004624 2.9e-92 343.2 277 58.8
Pp3c3_2090 Physcomitrium patens HOM05D004174 ORTHO05D004624 1.3e-89 334.3 386 48.4
Mapoly0103s0044 Marchantia polymorpha HOM05D004174 ORTHO05D004624 6.6e-89 332.0 286 57.0
SMO169G0291 Selaginella moellendorffii HOM05D004174 ORTHO05D004624 3.3e-88 329.7 254 63.4
Lj4A460T58 Lonicera japonica HOM05D004174 ORTHO05D004624 7.8e-82 308.5 234 67.1
AUR62030487 Chenopodium quinoa HOM05D004174 ORTHO05D004624 3.1e-78 296.6 174 81.6
AUR62011109 Chenopodium quinoa HOM05D004174 ORTHO05D004624 5.4e-75 285.8 197 73.6
Glyma.05G008302 Glycine max HOM05D004174 ORTHO05D004624 4.0e-70 269.6 176 75.0
SEGI_03330 Sequoiadendron giganteum HOM05D004174 ORTHO05D004624 1.3e-60 238.0 273 46.2
BolC2t07007H Brassica oleracea HOM05D004174 ORTHO05D004624 3.3e-48 196.8 202 51.5
Cpa.g.sc648.3 Carica papaya HOM05D004174 ORTHO05D004624 6.2e-47 192.6 198 54.0
AUR62015314 Chenopodium quinoa HOM05D004174 ORTHO05D004624 1.3e-44 184.9 146 63.7
Cre09.g396900 Chlamydomonas reinhardtii HOM05D004174 ORTHO05D004624 1.1e-43 181.8 237 40.5
AUR62011090 Chenopodium quinoa HOM05D003948 ORTHO05D004610 4.6e-42 176.4 177 53.7
Cc11_g15180 Coffea canephora HOM05D004174 ORTHO05D004624 5.1e-41 172.9 118 74.6
Ah.14g080310 Amaranthus hybridus HOM05D004174 ORTHO05D004624 2.8e-39 167.2 194 48.5
MD02G1035400 Malus domestica HOM05D004174 ORTHO05D004624 2.6e-37 160.6 82 87.8
Haze_27339 Corylus avellana HOM05D004174 ORTHO05D004624 6.7e-33 146.0 197 44.2
Psat3g000160 Pisum sativum HOM05D004174 ORTHO05D004624 1.4e-30 138.3 103 69.9
SEGI_13131 Sequoiadendron giganteum HOM05D004174 ORTHO05D004624 3.1e-30 137.1 298 33.9
Sabra06G0122300 Salix brachista HOM05D004174 ORTHO05D004624 5.3e-30 136.3 248 39.1
Cfa023976 Carpinus fangiana HOM05D003934 ORTHO05D005108 7.7e-29 132.5 205 35.1
Lj4C460T3 Lonicera japonica HOM05D004174 ORTHO05D004624 2.5e-27 127.5 74 81.1
Pp3c14_12120 Physcomitrium patens HOM05D004174 ORTHO05D004624 2.5e-27 127.5 246 34.1
Ah.12g053390 Amaranthus hybridus HOM05D004174 ORTHO05D004624 3.9e-25 120.2 64 84.4
Ah.12g055680 Amaranthus hybridus HOM05D004174 ORTHO05D004624 1.1e-24 118.6 64 82.8
Ah.05g171270 Amaranthus hybridus HOM05D004174 ORTHO05D004624 2.0e-24 117.9 64 82.8
Mapoly0019s0154 Marchantia polymorpha HOM05D004174 ORTHO05D004624 5.7e-24 116.3 256 34.4
MCO10G159 Micromonas commoda HOM05D004174 ORTHO05D004624 3.7e-23 113.6 263 30.8
CBR_g46446 Chara braunii HOM05D004174 ORTHO05D004624 1.3e-20 105.1 147 42.9
PRCOL_00006603 Prasinoderma coloniale HOM05D004174 ORTHO05D004624 5.5e-19 99.8 139 38.1
VMungo0647G2130 Vigna mungo HOM05D004174 ORTHO05D004624 9.4e-19 99.0 146 42.5
Cre13.g582476 Chlamydomonas reinhardtii HOM05D004174 ORTHO05D004624 1.8e-14 84.7 228 31.6
VMungo1215G0447 Vigna mungo HOM05D006361 ORTHO05D007824 1.9e-11 74.7 67 53.7
Ah.12g053410 Amaranthus hybridus HOM05D004174 ORTHO05D004624 1.0e-09 68.9 38 78.9
SMO141G0190 Selaginella moellendorffii HOM05D004174 ORTHO05D004624 1.5e-08 65.1 119 37.0


User provided reference genes

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