Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g023560 Pisum sativum HOM05D015237 ORTHO05D016348 2.0e-48 195.3 90 100.0
Psat5g220480 Pisum sativum HOM05D015237 ORTHO05D000022 1.2e-13 79.7 70 50.0
Psat0s1432g0040 Pisum sativum HOM05D048817 ORTHO05D016348 2.1e-13 79.0 50 70.0
Psat1g057480 Pisum sativum HOM05D015197 ORTHO05D000651 1.5e-11 72.8 69 44.9
Psat0s1928g0080 Pisum sativum HOM05D009299 ORTHO05D000022 9.9e-11 70.1 88 39.8
Psat0s1217g0120 Pisum sativum HOM05D015237 ORTHO05D016348 1.3e-10 69.7 94 36.2
Medtr0285s0020 Medicago truncatula HOM05D009299 ORTHO05D000022 1.7e-10 69.3 92 42.4
TPR.G35736 Trifolium pratense HOM05D009299 ORTHO05D000022 2.9e-10 68.6 67 44.8
TPR.G25752 Trifolium pratense HOM05D009299 ORTHO05D000022 2.4e-09 65.5 81 39.5
Psat6g004000 Pisum sativum HOM05D000009 ORTHO05D000008 5.4e-09 64.3 66 47.0
TPR.G34502 Trifolium pratense HOM05D029382 ORTHO05D022921 5.4e-09 64.3 86 38.4
RcHm_v2.0_Chr2g0129631 Rosa chinensis HOM05D005989 ORTHO05D000651 7.1e-09 63.9 81 39.5
Psat0s1775g0320 Pisum sativum HOM05D005989 ORTHO05D000022 9.3e-09 63.5 87 39.1
Psat0s1289g0120 Pisum sativum HOM05D009299 ORTHO05D000022 1.2e-08 63.2 66 47.0
Medtr2g041060 Medicago truncatula HOM05D009299 ORTHO05D000022 2.7e-08 62.0 87 31.0
Psat0s1021g0080 Pisum sativum HOM05D009299 ORTHO05D000022 2.7e-08 62.0 81 39.5
Atru.chr1.2142 Acer truncatum HOM05D000003 ORTHO05D000022 3.5e-08 61.6 74 37.8
Atru.chr1.2293 Acer truncatum HOM05D000003 ORTHO05D000004 3.5e-08 61.6 74 37.8
Atru.chr12.41 Acer truncatum HOM05D000003 ORTHO05D000022 4.6e-08 61.2 55 49.1
Medtr3g041640 Medicago truncatula HOM05D009299 ORTHO05D016348 4.6e-08 61.2 77 37.7
Medtr3g467460 Medicago truncatula HOM05D009299 ORTHO05D000022 6.0e-08 60.8 80 40.0
Psat0s2945g0120 Pisum sativum HOM05D009299 ORTHO05D000022 6.0e-08 60.8 87 33.3
Lalb_Chr21g0306271 Lupinus albus HOM05D005989 ORTHO05D000022 1.0e-07 60.1 76 38.2
Atru.chr3.1897 Acer truncatum HOM05D000003 ORTHO05D000651 1.7e-07 59.3 74 36.5
Atru.chr7.152 Acer truncatum HOM05D000003 ORTHO05D000022 2.3e-07 58.9 74 37.8
Atru.chr8.558 Acer truncatum HOM05D000003 ORTHO05D000022 2.3e-07 58.9 64 37.5
Atru.chr13.2205 Acer truncatum HOM05D000003 ORTHO05D000022 3.0e-07 58.5 74 36.5
Atru.chr4.578 Acer truncatum HOM05D000003 ORTHO05D000651 3.0e-07 58.5 74 36.5
Psat0s3568g0040 Pisum sativum HOM05D015237 ORTHO05D016348 3.0e-07 58.5 40 65.0
RcHm_v2.0_Chr5g0000531 Rosa chinensis HOM05D000985 ORTHO05D011902 3.9e-07 58.2 68 36.8
Atru.chr10.504 Acer truncatum HOM05D000003 ORTHO05D000022 5.1e-07 57.8 66 39.4
Atru.chr4.575 Acer truncatum HOM05D000003 ORTHO05D000651 5.1e-07 57.8 74 36.5
MD13G1019000 Malus domestica HOM05D000155 ORTHO05D000022 5.1e-07 57.8 44 52.3
Psat5g266280 Pisum sativum HOM05D015237 ORTHO05D016348 5.1e-07 57.8 47 53.2
RcHm_v2.0_Chr2g0160431 Rosa chinensis HOM05D000003 ORTHO05D000004 5.1e-07 57.8 65 41.5
RcHm_v2.0_Chr3g0453641 Rosa chinensis HOM05D000003 ORTHO05D000004 5.1e-07 57.8 65 41.5
RcHm_v2.0_Chr3g0455401 Rosa chinensis HOM05D000003 ORTHO05D000004 5.1e-07 57.8 65 41.5
RcHm_v2.0_Chr3g0465511 Rosa chinensis HOM05D000155 ORTHO05D000022 5.1e-07 57.8 65 41.5
RcHm_v2.0_Chr7g0185631 Rosa chinensis HOM05D000155 ORTHO05D000022 5.1e-07 57.8 65 41.5
TPR.G18735 Trifolium pratense HOM05D000901 ORTHO05D001160 5.1e-07 57.8 69 37.7
Atru.chr9.279 Acer truncatum HOM05D000003 ORTHO05D000022 6.6e-07 57.4 74 35.1
RcHm_v2.0_Chr3g0472791 Rosa chinensis HOM05D000155 ORTHO05D000022 6.6e-07 57.4 54 44.4
MD07G1021300 Malus domestica HOM05D000155 ORTHO05D000022 8.7e-07 57.0 66 40.9
Psat1g196440 Pisum sativum HOM05D048817 ORTHO05D016348 8.7e-07 57.0 36 66.7
QL03p010769 Quercus lobata HOM05D000155 ORTHO05D000022 8.7e-07 57.0 49 49.0
Medtr3g465360 Medicago truncatula HOM05D009351 ORTHO05D011822 1.9e-06 55.8 65 40.0
Medtr7g034685 Medicago truncatula HOM05D009299 ORTHO05D000022 1.9e-06 55.8 61 41.0
RcHm_v2.0_Chr3g0462451 Rosa chinensis HOM05D005989 ORTHO05D000022 1.9e-06 55.8 65 40.0
RcHm_v2.0_Chr4g0393351 Rosa chinensis HOM05D000155 ORTHO05D000022 1.9e-06 55.8 54 42.6
TPR.G35064 Trifolium pratense HOM05D009299 ORTHO05D000022 1.9e-06 55.8 67 35.8
Aqoxy3G01181 Aquilegia oxysepala HOM05D000003 ORTHO05D000651 2.5e-06 55.5 75 38.7
Psat5g248800 Pisum sativum HOM05D015197 ORTHO05D000022 2.5e-06 55.5 79 34.2
Atru.chr4.468 Acer truncatum HOM05D000003 ORTHO05D000004 3.3e-06 55.1 47 46.8
Psat5g017320 Pisum sativum HOM05D015197 ORTHO05D000022 3.3e-06 55.1 67 40.3
Aqoxy2G01718 Aquilegia oxysepala HOM05D000003 ORTHO05D000651 4.3e-06 54.7 75 37.3
Phvul.010G092900 Phaseolus vulgaris HOM05D009299 ORTHO05D016348 4.3e-06 54.7 60 45.0
Atru.chr2.2454 Acer truncatum HOM05D005989 ORTHO05D000022 5.6e-06 54.3 48 39.6
Atru.chr8.1018 Acer truncatum HOM05D000003 ORTHO05D000004 5.6e-06 54.3 47 46.8
FvH4_6g51131 Fragaria vesca HOM05D000155 ORTHO05D000022 5.6e-06 54.3 81 32.1
Atru.chr12.2056 Acer truncatum HOM05D000003 ORTHO05D000022 7.3e-06 53.9 64 39.1
Atru.chr2.1420 Acer truncatum HOM05D000003 ORTHO05D000022 7.3e-06 53.9 74 35.1
Atru.chr2.1816 Acer truncatum HOM05D000003 ORTHO05D000022 7.3e-06 53.9 64 35.9
Medtr2g096700 Medicago truncatula HOM05D009299 ORTHO05D000022 7.3e-06 53.9 59 37.3
Medtr8g015630 Medicago truncatula HOM05D000003 ORTHO05D000004 7.3e-06 53.9 47 44.7
Psat7g261240 Pisum sativum HOM05D000003 ORTHO05D012124 7.3e-06 53.9 27 81.5
Atru.chr8.108 Acer truncatum HOM05D000003 ORTHO05D000022 9.6e-06 53.5 55 40.0
Lj3g0015119 Lotus japonicus HOM05D000003 ORTHO05D000022 9.6e-06 53.5 47 42.6
RcHm_v2.0_Chr6g0251621 Rosa chinensis HOM05D000155 ORTHO05D000022 9.6e-06 53.5 43 48.8


User provided reference genes

Program Settings