Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g022920 Pisum sativum HOM05D007151 ORTHO05D009056 3.2e-264 914.4 442 100.0
TPR.G31930 Trifolium pratense HOM05D007151 ORTHO05D009056 4.1e-219 764.6 462 82.5
Medtr2g449830 Medicago truncatula HOM05D007151 ORTHO05D009056 9.3e-195 683.7 431 77.7
Glyma.15G208200 Glycine max HOM05D007151 ORTHO05D009056 6.0e-194 681.0 451 75.2
Lj6g0019652 Lotus japonicus HOM05D007151 ORTHO05D009056 8.4e-188 660.6 450 72.9
VMungo1309G1509 Vigna mungo HOM05D007151 ORTHO05D009056 1.9e-187 659.4 449 73.7
Ca_25731_v3 Cicer arietinum L. HOM05D007151 ORTHO05D009056 6.9e-182 641.0 396 80.3
Phvul.009G208100 Phaseolus vulgaris HOM05D007151 ORTHO05D009056 6.9e-174 614.4 449 69.7
arahy.Tifrunner.gnm1.ann1.BVF972 Arachis hypogaea HOM05D007151 ORTHO05D009056 1.8e-169 599.7 447 69.1
Manes.06G039800 Manihot esculenta HOM05D007151 ORTHO05D009056 3.2e-163 578.9 432 66.0
Atru.chr7.189 Acer truncatum HOM05D007151 ORTHO05D009056 3.0e-161 572.4 425 65.9
arahy.Tifrunner.gnm1.ann1.36BD1U Arachis hypogaea HOM05D007151 ORTHO05D009056 1.3e-159 567.0 423 68.8
Duzib168G1221 Durio zibethinus HOM05D007151 ORTHO05D009056 1.7e-159 566.6 418 65.6
QL02p091761 Quercus lobata HOM05D007151 ORTHO05D009056 2.2e-159 566.2 434 63.6
Cfa020867 Carpinus fangiana HOM05D007151 ORTHO05D009056 2.8e-159 565.8 405 65.9
Ciclev10008285m.g Citrus clementina HOM05D007151 ORTHO05D009056 1.4e-158 563.5 415 65.3
TWI34G1895 Tripterygium wilfordii HOM05D007151 ORTHO05D009056 2.4e-158 562.8 434 63.6
Gohir.A13G185600 Gossypium hirsutum HOM05D007151 ORTHO05D009056 5.3e-158 561.6 432 63.0
Actinidia04269 Actinidia chinensis HOM05D007151 ORTHO05D009056 4.5e-157 558.5 429 62.0
Gohir.D13G192100 Gossypium hirsutum HOM05D007151 ORTHO05D009056 4.5e-157 558.5 432 62.5
Gorai.013G218000 Gossypium raimondii HOM05D007151 ORTHO05D009056 1.0e-156 557.4 432 62.5
Thecc.09G036700 Theobroma cacao HOM05D007151 ORTHO05D009056 2.2e-156 556.2 425 63.5
CiPaw.15G171100 Carya illinoinensis HOM05D007151 ORTHO05D009056 6.5e-156 554.7 413 63.9
Cpa.g.sc46.106 Carica papaya HOM05D007151 ORTHO05D009056 1.4e-155 553.5 402 64.9
Haze_19293 Corylus avellana HOM05D007151 ORTHO05D009056 1.4e-155 553.5 414 64.3
Sabra18G0095800 Salix brachista HOM05D007151 ORTHO05D009056 1.6e-154 550.1 409 64.5
Prupe.7G252600 Prunus persica HOM05D007151 ORTHO05D009056 4.7e-154 548.5 436 62.4
MD02G1011800 Malus domestica HOM05D007151 ORTHO05D009056 6.1e-154 548.1 424 62.0
Actinidia04263 Actinidia chinensis HOM05D007151 ORTHO05D009056 1.4e-153 547.0 428 60.5
GSVIVG01001047001 Vitis vinifera HOM05D007151 ORTHO05D009056 1.4e-153 547.0 427 63.5
Potri.018G112600 Populus trichocarpa HOM05D007151 ORTHO05D009056 3.9e-153 545.4 423 63.1
COL.COLO4_18747 Corchorus olitorius HOM05D007151 ORTHO05D009056 1.1e-152 543.9 439 62.2
Sed0008117 Sechium edule HOM05D007151 ORTHO05D009056 1.5e-152 543.5 396 64.1
RcHm_v2.0_Chr2g0086401 Rosa chinensis HOM05D007151 ORTHO05D009056 5.7e-152 541.6 415 63.1
CSS0031191 Camellia sinensis var. sinensis HOM05D007151 ORTHO05D009056 2.2e-151 539.7 399 63.4
FvH4_1g01491 Fragaria vesca HOM05D007151 ORTHO05D009056 1.4e-150 537.0 428 61.9
CANSAT11G1483 Cannabis sativa HOM05D007151 ORTHO05D009056 1.8e-150 536.6 422 60.0
TAR626G0740 Trochodendron aralioides HOM05D007151 ORTHO05D009056 1.8e-150 536.6 400 64.0
FAN26G2518 Fragaria x ananassa HOM05D007151 ORTHO05D009056 4.5e-149 531.9 406 63.3
vmacro21874 Vaccinium macrocarpon HOM05D007151 ORTHO05D009056 1.7e-148 530.0 403 61.0
ClCG06G012110 Citrullus lanatus HOM05D007151 ORTHO05D009056 4.7e-146 521.9 431 59.4
CsaV3_1G028600 Cucumis sativus L. HOM05D007151 ORTHO05D009056 8.0e-146 521.2 402 61.4
Nitab4.5_0000416g0100 Nicotiana tabacum HOM05D007151 ORTHO05D009056 8.0e-146 521.2 426 60.1
Eucgr.C00404 Eucalyptus grandis HOM05D007151 ORTHO05D009056 1.8e-145 520.0 402 61.4
Peaxi162Scf00347g00330 Petunia axillaris HOM05D007151 ORTHO05D009056 5.2e-145 518.5 402 61.9
Lj9A711T48 Lonicera japonica HOM05D007151 ORTHO05D009056 1.5e-144 516.9 457 56.2
Nn8g39757 Nelumbo nucifera HOM05D007151 ORTHO05D009056 1.5e-144 516.9 404 62.9
Nitab4.5_0010178g0030 Nicotiana tabacum HOM05D007151 ORTHO05D009056 5.7e-144 515.0 400 61.8
Lsat_1_v5_gn_0_44621 Lactuca sativa HOM05D007151 ORTHO05D009056 2.8e-143 512.7 409 59.9
Lsat_1_v5_gn_5_90740 Lactuca sativa HOM05D007151 ORTHO05D009056 2.8e-143 512.7 409 59.9
ECA234G3390 Erigeron canadensis HOM05D000399 ORTHO05D000304 4.8e-143 511.9 405 59.5
HanXRQChr10g0314511 Helianthus annuus HOM05D007151 ORTHO05D009056 2.4e-142 509.6 403 59.3
FAN23G0937 Fragaria x ananassa HOM05D007151 ORTHO05D009056 4.1e-142 508.8 452 58.0
CAN.G520.35 Capsicum annuum HOM05D007151 ORTHO05D009056 1.6e-141 506.9 400 62.0
Oeu052172.1 Olea europaea HOM05D007151 ORTHO05D009056 2.7e-141 506.1 443 56.0
THA.LOC104826576 Tarenaya hassleriana HOM05D007151 ORTHO05D009056 2.7e-141 506.1 431 58.5
A03p51030 Brassica napus HOM05D007151 ORTHO05D009056 1.0e-140 504.2 407 59.2
Hund21618 Selenicereus undatus HOM05D007151 ORTHO05D009056 3.8e-140 502.3 414 57.7
BraA03t14189Z Brassica rapa HOM05D007151 ORTHO05D009056 1.9e-139 500.0 441 55.3
PGR142G3459 Punica granatum HOM05D007151 ORTHO05D009056 2.5e-139 499.6 398 58.8
C07p49460 Brassica napus HOM05D007151 ORTHO05D009056 3.2e-139 499.2 407 58.0
BolC7t45451H Brassica oleracea HOM05D007151 ORTHO05D009056 1.2e-138 497.3 407 58.0
Thhalv10025257m.g Eutrema salsugineum HOM05D007151 ORTHO05D009056 2.7e-138 496.1 432 56.5
Solyc07g005240.4 Solanum lycopersicum HOM05D007151 ORTHO05D009056 2.7e-138 496.1 403 59.8
PGSC0003DMG400011834 Solanum tuberosum HOM05D007151 ORTHO05D009056 2.7e-138 496.1 403 59.6
Lalb_Chr08g0233881 Lupinus albus HOM05D007151 ORTHO05D009056 1.2e-136 490.7 298 79.5
Aqoxy7G03505 Aquilegia oxysepala HOM05D007151 ORTHO05D009056 2.0e-136 490.0 401 57.1
Dinv41414 Davidia involucrata HOM05D007151 ORTHO05D009056 2.6e-136 489.6 374 62.8
DCAR_019364 Daucus carota HOM05D007151 ORTHO05D009056 3.4e-136 489.2 400 58.0
AL3G44210 Arabidopsis lyrata HOM05D007151 ORTHO05D009056 4.4e-136 488.8 440 55.0
AT2G22650 Arabidopsis thaliana HOM05D007151 ORTHO05D009056 4.4e-136 488.8 405 56.8
MELO3C010253.2 Cucumis melo HOM05D007151 ORTHO05D009056 3.1e-134 482.6 402 58.5
CARHR104080 Cardamine hirsuta HOM05D007151 ORTHO05D009056 2.0e-133 479.9 393 58.0
Cc06_g23440 Coffea canephora HOM05D007151 ORTHO05D009056 1.5e-131 473.8 402 56.7
Migut.K00359 Erythranthe guttata HOM05D007151 ORTHO05D009056 1.9e-131 473.4 403 57.1
PSO063G2965 Papaver somniferum HOM05D007151 ORTHO05D009056 2.1e-130 469.9 436 53.2
Aa31sc130G90 Aethionema arabicum HOM05D007151 ORTHO05D009056 4.7e-130 468.8 415 54.9
Sp7g16040 Schrenkiella parvula HOM05D007151 ORTHO05D009056 4.7e-130 468.8 422 55.7
EL10Ac8g18840 Beta vulgaris HOM05D007151 ORTHO05D009056 6.8e-129 464.9 436 52.8
Sc08g0005090 Simmondsia chinensis HOM05D007151 ORTHO05D009056 2.2e-127 459.9 409 57.2
AUR62042027 Chenopodium quinoa HOM05D007151 ORTHO05D009056 8.3e-127 458.0 398 55.5
SGA_v2.0_scaffold336G49159 Striga asiatica HOM05D007151 ORTHO05D009056 5.9e-125 451.8 413 50.6
Os06g0181400 Oryza sativa ssp. japonica HOM05D007151 ORTHO05D009056 2.9e-124 449.5 393 54.5
Zm00001eb268060 Zea mays HOM05D007151 ORTHO05D009056 2.9e-124 449.5 434 51.8
Sopen07g001150 Solanum pennellii HOM05D007151 ORTHO05D009056 6.6e-116 421.8 355 57.7
SGA_v2.0_scaffold206G41840 Striga asiatica HOM05D007151 ORTHO05D009056 6.6e-116 421.8 411 49.1
CDE05G1962 Ceratophyllum demersum HOM05D007151 ORTHO05D009056 8.6e-116 421.4 441 49.0
CSS0035136 Camellia sinensis var. sinensis HOM05D007151 ORTHO05D009056 3.1e-113 412.9 298 63.1
Ah.14g078500 Amaranthus hybridus HOM05D007151 ORTHO05D009056 1.5e-112 410.6 399 50.6
SEGI_09059 Sequoiadendron giganteum HOM05D007151 ORTHO05D009056 2.0e-112 410.2 417 48.4
Rhsim01G0049000 Rhododendron simsii HOM05D007151 ORTHO05D008498 1.6e-106 390.6 353 53.8
unitig_899.g15451 Utricularia gibba HOM05D007151 ORTHO05D009056 2.8e-106 389.8 377 50.7
FvH4_5g35120 Fragaria vesca HOM05D007151 ORTHO05D009056 6.8e-105 385.2 285 63.5
ATR0629G078 Amborella trichopoda HOM05D007151 ORTHO05D009056 5.4e-102 375.6 366 50.8
Carub.0013s0015 Capsella rubella HOM05D007151 ORTHO05D009056 4.3e-99 365.9 298 58.4
Mapoly0072s0110 Marchantia polymorpha HOM05D007151 ORTHO05D009056 5.4e-94 349.0 412 43.4
Pp3c21_4180 Physcomitrium patens HOM05D007151 ORTHO05D009056 3.6e-82 309.7 430 40.0
Cc06_g23410 Coffea canephora HOM05D007151 ORTHO05D009056 4.5e-56 223.0 292 42.5
AagrBONN_evm.TU.Sc2ySwM_117.1501 Anthoceros agrestis HOM05D007151 ORTHO05D009056 1.4e-54 218.0 304 37.2
PRCOL_00000450 Prasinoderma coloniale HOM05D007151 ORTHO05D009056 4.3e-51 206.5 396 34.6
CANSAT11G0850 Cannabis sativa HOM05D007151 ORTHO05D009056 3.2e-46 190.3 122 68.0
Lalb_Chr08g0233871 Lupinus albus HOM05D007151 ORTHO05D009056 7.9e-45 185.7 153 66.0
Cre02.g109800 Chlamydomonas reinhardtii HOM05D007151 ORTHO05D009056 1.2e-40 171.8 529 26.8
SMO364G0487 Selaginella moellendorffii HOM05D007151 ORTHO05D009056 1.2e-37 161.8 200 42.5
TPR.G31928 Trifolium pratense HOM05D007151 ORTHO05D009056 1.1e-30 138.7 102 70.6
MCO12G285 Micromonas commoda HOM05D007151 ORTHO05D009056 7.0e-25 119.4 494 24.1
CBR_g19142 Chara braunii HOM05D007151 ORTHO05D009056 1.8e-17 94.7 260 26.5
HPP92_018514 Vanilla planifolia HOM05D007151 ORTHO05D009056 1.0e-15 89.0 84 54.8
FAN11G2323 Fragaria x ananassa HOM05D007151 ORTHO05D009056 1.1e-14 85.5 57 66.7
Hma1.2p1_0182F.1_g080700 Hydrangea macrophylla HOM05D007151 ORTHO05D009056 3.2e-09 67.4 44 68.2


User provided reference genes

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