Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g021800 Pisum sativum HOM05D005809 ORTHO05D007259 7.3e-116 420.6 220 100.0
Ca_03733_v3 Cicer arietinum L. HOM05D005809 ORTHO05D007259 7.1e-95 350.9 233 80.7
Medtr2g460780 Medicago truncatula HOM05D005809 ORTHO05D007259 3.0e-93 345.5 228 82.5
TPR.G20735 Trifolium pratense HOM05D005809 ORTHO05D007259 3.4e-89 332.0 233 78.1
Phvul.009G195100 Phaseolus vulgaris HOM05D005809 ORTHO05D007259 2.2e-88 329.3 223 76.2
Glyma.06G219400 Glycine max HOM05D005809 ORTHO05D007259 7.9e-86 320.9 224 77.2
Lalb_Chr23g0275681 Lupinus albus HOM05D005809 ORTHO05D007259 1.8e-85 319.7 231 73.6
Lj6g0016819 Lotus japonicus HOM05D005809 ORTHO05D007259 5.1e-85 318.2 229 72.1
Glyma.06G219200 Glycine max HOM05D005809 ORTHO05D007259 1.4e-82 310.1 224 75.0
arahy.Tifrunner.gnm1.ann1.46B1EJ Arachis hypogaea HOM05D005809 ORTHO05D007259 4.5e-81 305.1 224 71.4
arahy.Tifrunner.gnm1.ann1.Z5GGTZ Arachis hypogaea HOM05D005809 ORTHO05D007259 4.2e-79 298.5 224 70.5
Prupe.7G262800 Prunus persica HOM05D005809 ORTHO05D007259 3.9e-77 292.0 225 66.7
QL02p093215 Quercus lobata HOM05D005809 ORTHO05D007259 6.7e-77 291.2 232 66.8
GSVIVG01023603001 Vitis vinifera HOM05D005809 ORTHO05D007259 1.8e-74 283.1 232 63.8
Dinv41380 Davidia involucrata HOM05D005809 ORTHO05D007259 4.1e-74 282.0 231 64.1
Nn8g39891 Nelumbo nucifera HOM05D005809 ORTHO05D007259 5.3e-74 281.6 226 64.6
Potri.006G184600 Populus trichocarpa HOM05D005809 ORTHO05D007259 6.9e-74 281.2 222 68.0
CANSAT11G2656 Cannabis sativa HOM05D005809 ORTHO05D007259 9.0e-74 280.8 232 63.8
Gohir.D05G056000 Gossypium hirsutum HOM05D005809 ORTHO05D007259 2.0e-73 279.6 225 64.4
Eucgr.C02542 Eucalyptus grandis HOM05D005809 ORTHO05D007259 2.6e-73 279.3 231 61.9
MD02G1007700 Malus domestica HOM05D005809 ORTHO05D007259 3.4e-73 278.9 225 63.6
Migut.J01341 Erythranthe guttata HOM05D005809 ORTHO05D007259 5.9e-73 278.1 220 63.2
Gorai.009G057000 Gossypium raimondii HOM05D005809 ORTHO05D007259 5.9e-73 278.1 225 64.0
Sabra06G0140200 Salix brachista HOM05D005809 ORTHO05D007259 5.9e-73 278.1 227 66.5
COL.COLO4_18808 Corchorus olitorius HOM05D005809 ORTHO05D007259 7.6e-73 277.7 228 63.6
Eucgr.C02492 Eucalyptus grandis HOM05D005809 ORTHO05D007259 1.3e-72 276.9 231 61.9
CiPaw.15G168900 Carya illinoinensis HOM05D005809 ORTHO05D007259 1.7e-72 276.6 231 63.6
CSS0045900 Camellia sinensis var. sinensis HOM05D005809 ORTHO05D007259 2.2e-72 276.2 230 63.0
ECA247G0266 Erigeron canadensis HOM05D005809 ORTHO05D007259 5.0e-72 275.0 221 65.6
RcHm_v2.0_Chr2g0085671 Rosa chinensis HOM05D005809 ORTHO05D007259 6.5e-72 274.6 225 65.3
Duzib187G1947 Durio zibethinus HOM05D005809 ORTHO05D007259 8.5e-72 274.2 225 63.1
CsaV3_2G007490 Cucumis sativus L. HOM05D005809 ORTHO05D007259 1.1e-71 273.9 230 60.0
Hma1.2p1_0222F.1_g093550 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 1.1e-71 273.9 224 63.8
FAN23G2666 Fragaria x ananassa HOM05D005809 ORTHO05D007259 1.4e-71 273.5 225 64.4
MELO3C004136.2 Cucumis melo HOM05D005809 ORTHO05D007259 1.9e-71 273.1 230 60.0
Dinv43244 Davidia involucrata HOM05D005809 ORTHO05D007259 1.9e-71 273.1 231 61.9
Thecc.09G030800 Theobroma cacao HOM05D005809 ORTHO05D007259 3.2e-71 272.3 228 62.3
TAR636G3217 Trochodendron aralioides HOM05D005809 ORTHO05D007259 7.2e-71 271.2 232 60.8
Solyc07g005640.3 Solanum lycopersicum HOM05D005809 ORTHO05D007259 1.3e-69 266.9 225 60.4
Ciclev10009378m.g Citrus clementina HOM05D005809 ORTHO05D007259 2.3e-69 266.2 231 61.0
CARHR271730 Cardamine hirsuta HOM05D005809 ORTHO05D007259 3.0e-69 265.8 227 60.8
Aqoxy2G02328 Aquilegia oxysepala HOM05D005809 ORTHO05D007259 5.1e-69 265.0 222 63.1
PGR102G1797 Punica granatum HOM05D005809 ORTHO05D007259 5.1e-69 265.0 229 60.7
AL8G34030 Arabidopsis lyrata HOM05D005809 ORTHO05D007259 6.7e-69 264.6 227 61.2
Sopen07g001740 Solanum pennellii HOM05D005809 ORTHO05D007259 8.7e-69 264.2 225 60.0
PGSC0003DMG401011139 Solanum tuberosum HOM05D005809 ORTHO05D007259 8.7e-69 264.2 230 59.6
MSTRG.19648 Avicennia marina HOM05D005809 ORTHO05D007259 1.5e-68 263.5 229 59.8
Carub.0008s1848 Capsella rubella HOM05D005809 ORTHO05D007259 1.5e-68 263.5 227 61.2
Sed0001225 Sechium edule HOM05D005809 ORTHO05D007259 3.3e-68 262.3 230 58.3
THA.LOC104817821 Tarenaya hassleriana HOM05D005809 ORTHO05D007259 3.3e-68 262.3 223 60.5
TWI34G1090 Tripterygium wilfordii HOM05D005809 ORTHO05D007259 3.3e-68 262.3 233 61.8
Oeu052197.1 Olea europaea HOM05D005809 ORTHO05D007259 4.3e-68 261.9 226 60.2
Atru.chr7.51 Acer truncatum HOM05D005809 ORTHO05D007259 5.7e-68 261.5 227 59.5
FvH4_1g00940 Fragaria vesca HOM05D005809 ORTHO05D007259 5.7e-68 261.5 218 63.3
unitig_746.g26584 Utricularia gibba HOM05D005809 ORTHO05D007259 1.6e-67 260.0 220 60.0
HanXRQChr17g0552351 Helianthus annuus HOM05D005809 ORTHO05D007259 2.8e-67 259.2 220 63.2
AT5G57950 Arabidopsis thaliana HOM05D005809 ORTHO05D007259 8.2e-67 257.7 228 60.1
BraA10t43609Z Brassica rapa HOM05D005809 ORTHO05D007259 1.1e-66 257.3 224 59.4
Manes.06G033951 Manihot esculenta HOM05D005809 ORTHO05D007259 5.3e-66 255.0 233 59.2
TWI32G0918 Tripterygium wilfordii HOM05D005809 ORTHO05D007259 5.3e-66 255.0 226 61.9
Sp6g19620 Schrenkiella parvula HOM05D005809 ORTHO05D007259 6.9e-66 254.6 227 58.6
PSO782G1751 Papaver somniferum HOM05D005809 ORTHO05D007259 3.4e-65 252.3 220 59.1
A10p16200 Brassica napus HOM05D005809 ORTHO05D007259 4.5e-65 251.9 224 60.3
SalBow1G5910 Salvia bowleyana HOM05D005809 ORTHO05D007259 4.5e-65 251.9 213 60.6
PSO063G2086 Papaver somniferum HOM05D005809 ORTHO05D007259 1.3e-64 250.4 220 58.6
BolC9t57830H Brassica oleracea HOM05D005809 ORTHO05D007259 2.2e-64 249.6 220 58.2
C09p49790 Brassica napus HOM05D005809 ORTHO05D007259 6.5e-64 248.1 220 57.7
Sc08g0005640 Simmondsia chinensis HOM05D005809 ORTHO05D007259 6.5e-64 248.1 224 56.7
Cpa.g.sc46.154 Carica papaya HOM05D005809 ORTHO05D007259 1.1e-63 247.3 220 60.5
Ah.02g128190 Amaranthus hybridus HOM05D005809 ORTHO05D007259 1.9e-63 246.5 220 59.1
Haze_19206 Corylus avellana HOM05D005809 ORTHO05D007259 2.5e-63 246.1 213 62.4
Thhalv10014592m.g Eutrema salsugineum HOM05D005809 ORTHO05D007259 1.2e-62 243.8 220 58.6
Duzib168G0271 Durio zibethinus HOM05D005809 ORTHO05D007259 1.6e-62 243.4 218 60.1
CAN.G160.58 Capsicum annuum HOM05D005809 ORTHO05D007259 3.6e-62 242.3 228 57.0
ATR0739G206 Amborella trichopoda HOM05D005809 ORTHO05D007259 1.0e-61 240.7 227 58.1
Actinidia04301 Actinidia chinensis HOM05D005809 ORTHO05D007259 3.0e-61 239.2 222 57.7
SEGI_31268 Sequoiadendron giganteum HOM05D005809 ORTHO05D007259 1.1e-60 237.3 231 55.4
HPP92_016019 Vanilla planifolia HOM05D005809 ORTHO05D007259 2.0e-60 236.5 221 57.0
Aa31LG3G13770 Aethionema arabicum HOM05D000853 ORTHO05D000723 7.4e-60 234.6 223 55.6
Os09g0420600 Oryza sativa ssp. japonica HOM05D005809 ORTHO05D007259 1.7e-59 233.4 221 55.7
DCAR_017909 Daucus carota HOM05D005809 ORTHO05D007259 4.8e-59 231.9 246 54.1
SGA_v2.0_scaffold265G46107 Striga asiatica HOM05D005809 ORTHO05D007259 6.3e-59 231.5 213 57.3
Nitab4.5_0005653g0040 Nicotiana tabacum HOM05D005809 ORTHO05D007259 8.2e-59 231.1 223 56.1
Gohir.A05G055000 Gossypium hirsutum HOM05D005809 ORTHO05D007259 1.4e-58 230.3 225 57.8
Lsat_1_v5_gn_8_63301 Lactuca sativa HOM05D005809 ORTHO05D007259 1.4e-58 230.3 233 54.9
vmacro16802 Vaccinium macrocarpon HOM05D005809 ORTHO05D007259 6.9e-58 228.0 281 48.4
Zm00001eb312980 Zea mays HOM05D005809 ORTHO05D007259 2.0e-57 226.5 220 54.5
Nitab4.5_0001571g0010 Nicotiana tabacum HOM05D005809 ORTHO05D007259 2.6e-57 226.1 237 53.2
ClCG02G014530 Citrullus lanatus HOM05D005809 ORTHO05D007259 1.3e-56 223.8 211 55.9
Peaxi162Scf00401g00082 Petunia axillaris HOM05D005809 ORTHO05D007259 1.7e-56 223.4 216 55.1
Rhsim01G0033400 Rhododendron simsii HOM05D005809 ORTHO05D007259 8.5e-56 221.1 224 56.7
HPP92_016035 Vanilla planifolia HOM05D005809 ORTHO05D007259 8.5e-56 221.1 202 58.4
CDE12G0564 Ceratophyllum demersum HOM05D005809 ORTHO05D007259 5.5e-55 218.4 251 50.2
Hund01517 Selenicereus undatus HOM05D005809 ORTHO05D007259 1.7e-51 206.8 213 53.1
AUR62035200 Chenopodium quinoa HOM05D005809 ORTHO05D007259 8.2e-51 204.5 220 51.4
AagrBONN_evm.TU.Sc2ySwM_117.3948 Anthoceros agrestis HOM05D005809 ORTHO05D007259 1.1e-50 204.1 233 46.8
Lj9C717G7 Lonicera japonica HOM05D005809 ORTHO05D007259 1.2e-49 200.7 213 51.6
Mapoly0003s0072 Marchantia polymorpha HOM05D005809 ORTHO05D007259 2.0e-49 199.9 233 46.8
Pp3c8_2960 Physcomitrium patens HOM05D005809 ORTHO05D007259 1.7e-48 196.8 230 46.1
FAN28G0834 Fragaria x ananassa HOM05D005809 ORTHO05D007259 2.9e-48 196.1 226 50.9
SMO361G0343 Selaginella moellendorffii HOM05D005809 ORTHO05D007259 5.2e-45 185.3 228 45.6
Pp3c16_13530 Physcomitrium patens HOM05D005809 ORTHO05D007259 2.6e-44 183.0 218 44.5
Dinv42856 Davidia involucrata HOM05D005809 ORTHO05D007259 6.3e-43 178.3 165 57.0
SMO361G0248 Selaginella moellendorffii HOM05D005809 ORTHO05D007259 8.2e-43 177.9 221 46.2
Actinidia38322 Actinidia chinensis HOM05D005809 ORTHO05D007259 3.5e-41 172.6 191 54.5
vmacro05441 Vaccinium macrocarpon HOM05D005809 ORTHO05D007259 5.9e-41 171.8 189 49.7
SHI02853 Sapria himalayana HOM05D005809 ORTHO05D007259 3.2e-39 166.0 208 48.6
Sed0002126 Sechium edule HOM05D005809 ORTHO05D007259 3.2e-39 166.0 160 55.6
Hma1.2p1_0010F.1_g006710 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 1.3e-35 154.1 157 52.9
Cc06_g14990 Coffea canephora HOM05D005809 ORTHO05D007259 1.5e-31 140.6 109 60.6
RcHm_v2.0_Chr5g0031291 Rosa chinensis HOM05D005809 ORTHO05D007259 6.8e-29 131.7 111 62.2
FAN25G0559 Fragaria x ananassa HOM05D005809 ORTHO05D007259 9.8e-28 127.9 132 53.0
FAN21G3780 Fragaria x ananassa HOM05D005809 ORTHO05D007259 1.7e-27 127.1 183 44.3
MCO13G469 Micromonas commoda HOM05D005809 ORTHO05D007259 3.7e-27 125.9 216 37.0
EL10As1g23143 Beta vulgaris HOM05D005809 ORTHO05D007259 1.8e-26 123.6 88 64.8
CBR_g38078 Chara braunii HOM05D000019 ORTHO05D000048 7.0e-26 121.7 261 31.8
Aa31LG1G19310 Aethionema arabicum HOM05D005809 ORTHO05D007259 1.2e-25 120.9 94 59.6
Cc06_g14980 Coffea canephora HOM05D005809 ORTHO05D007259 9.5e-23 111.3 106 57.5
Cre04.g226950 Chlamydomonas reinhardtii HOM05D005809 ORTHO05D007259 8.9e-21 104.8 278 30.6
Oeu049715.1 Olea europaea HOM05D005809 ORTHO05D007259 7.5e-20 101.7 89 56.2
FvH4_3g18530 Fragaria vesca HOM05D005809 ORTHO05D007259 9.8e-20 101.3 159 41.5
FAN11G2737 Fragaria x ananassa HOM05D005809 ORTHO05D007259 9.8e-20 101.3 159 41.5
Oeu007777.1 Olea europaea HOM05D005809 ORTHO05D007259 3.7e-19 99.4 89 55.1
Oeu038698.1 Olea europaea HOM05D005809 ORTHO05D007259 6.4e-19 98.6 89 55.1
Hma1.2p1_0222F.1_g093570 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 4.1e-18 95.9 74 70.3
EL10As1g23140 Beta vulgaris HOM05D005809 ORTHO05D007259 3.5e-17 92.8 63 74.6
Oeu017561.1 Olea europaea HOM05D005809 ORTHO05D007259 3.5e-17 92.8 89 51.7
PRCOL_00000214 Prasinoderma coloniale HOM05D005809 ORTHO05D007259 1.9e-15 87.0 198 33.8
FAN26G2229 Fragaria x ananassa HOM05D005809 ORTHO05D007259 2.3e-13 80.1 57 64.9
Oeu029241.1 Olea europaea HOM05D005809 ORTHO05D007259 7.5e-12 75.1 77 45.5
MD09G1175000 Malus domestica HOM05D005809 ORTHO05D007259 1.7e-11 73.9 86 53.5
vmacro11582 Vaccinium macrocarpon HOM05D005809 ORTHO05D010075 1.9e-10 70.5 54 63.0
CSS0015204 Camellia sinensis var. sinensis HOM05D000853 ORTHO05D000723 7.8e-09 65.1 73 50.7


User provided reference genes

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