Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g017720 Pisum sativum HOM05D006846 ORTHO05D008473 1.0e-76 290.0 149 100.0
Medtr2g046100 Medicago truncatula HOM05D006846 ORTHO05D008473 5.7e-64 247.7 149 85.9
Ca_02363_v3 Cicer arietinum L. HOM05D006846 ORTHO05D008473 5.6e-59 231.1 149 81.2
Lj6g0016026 Lotus japonicus HOM05D006846 ORTHO05D008473 4.7e-58 228.0 152 76.3
Glyma.15G188800 Glycine max HOM05D006846 ORTHO05D008473 8.0e-58 227.3 151 78.8
VMungo1309G3101 Vigna mungo HOM05D006846 ORTHO05D008473 7.0e-54 214.2 153 73.9
Phvul.009G219800 Phaseolus vulgaris HOM05D006846 ORTHO05D008473 3.5e-53 211.8 153 71.9
Lalb_Chr07g0181811 Lupinus albus HOM05D006846 ORTHO05D008473 4.0e-49 198.4 148 68.9
TPR.G27493 Trifolium pratense HOM05D006846 ORTHO05D008473 2.6e-48 195.7 125 79.2
arahy.Tifrunner.gnm1.ann1.BIT0EB Arachis hypogaea HOM05D006846 ORTHO05D008473 3.2e-46 188.7 140 65.7
QL06p041421 Quercus lobata HOM05D006846 ORTHO05D008473 2.0e-45 186.0 120 73.3
Migut.H02019 Erythranthe guttata HOM05D006846 ORTHO05D008473 1.0e-44 183.7 143 62.9
Prupe.1G108100 Prunus persica HOM05D006846 ORTHO05D008473 3.9e-44 181.8 141 67.4
GSVIVG01017604001 Vitis vinifera HOM05D006846 ORTHO05D008473 6.6e-44 181.0 138 64.5
GSVIVG01017661001 Vitis vinifera HOM05D006846 ORTHO05D008473 6.6e-44 181.0 138 64.5
Duzib212G0339 Durio zibethinus HOM05D006846 ORTHO05D008473 1.1e-41 173.7 115 73.0
CiPaw.01G161800 Carya illinoinensis HOM05D006846 ORTHO05D008473 1.4e-41 173.3 131 65.6
PGR004G1594 Punica granatum HOM05D006846 ORTHO05D008473 1.4e-41 173.3 139 61.2
PGR033G0007 Punica granatum HOM05D006846 ORTHO05D008473 1.4e-41 173.3 139 61.2
Aa31LG10G5560 Aethionema arabicum HOM05D006846 ORTHO05D008473 1.8e-41 172.9 138 59.4
Eucgr.H04110 Eucalyptus grandis HOM05D006846 ORTHO05D008473 3.1e-41 172.2 147 57.8
MD13G1143600 Malus domestica HOM05D006846 ORTHO05D008473 3.1e-41 172.2 120 71.7
AT1G48170 Arabidopsis thaliana HOM05D006846 ORTHO05D008473 4.0e-41 171.8 117 69.2
Thhalv10012405m.g Eutrema salsugineum HOM05D006846 ORTHO05D008473 4.0e-41 171.8 121 66.1
Sp3g23740 Schrenkiella parvula HOM05D006846 ORTHO05D008473 4.0e-41 171.8 120 67.5
CsaV3_4G025810 Cucumis sativus L. HOM05D006846 ORTHO05D008473 5.2e-41 171.4 122 65.6
MELO3C003207.2 Cucumis melo HOM05D006846 ORTHO05D008473 6.8e-41 171.0 120 65.8
Sed0003831 Sechium edule HOM05D006846 ORTHO05D008473 6.8e-41 171.0 147 59.9
Hund16859 Selenicereus undatus HOM05D006846 ORTHO05D008473 1.2e-40 170.2 121 68.6
BolC6t35393H Brassica oleracea HOM05D006846 ORTHO05D008473 2.6e-40 169.1 136 58.1
BcaB07g33786 Brassica carinata HOM05D006846 ORTHO05D008473 3.4e-40 168.7 115 68.7
Thecc.04G310600 Theobroma cacao HOM05D006846 ORTHO05D008473 3.4e-40 168.7 121 67.8
AL1G54740 Arabidopsis lyrata HOM05D006846 ORTHO05D008473 4.4e-40 168.3 141 58.2
BcaC08g43012 Brassica carinata HOM05D006846 ORTHO05D008473 4.4e-40 168.3 136 58.1
A06p04640 Brassica napus HOM05D006846 ORTHO05D008473 4.4e-40 168.3 136 57.4
C06p02670 Brassica napus HOM05D006846 ORTHO05D008473 4.4e-40 168.3 136 58.1
BraA06t23668Z Brassica rapa HOM05D006846 ORTHO05D008473 4.4e-40 168.3 136 57.4
RcHm_v2.0_Chr4g0426881 Rosa chinensis HOM05D006846 ORTHO05D008473 4.4e-40 168.3 140 62.1
FAN07G1325 Fragaria x ananassa HOM05D006846 ORTHO05D008473 5.8e-40 167.9 137 62.8
Actinidia18502 Actinidia chinensis HOM05D006846 ORTHO05D008473 7.5e-40 167.5 113 71.7
CDE12G0609 Ceratophyllum demersum HOM05D006846 ORTHO05D008473 7.5e-40 167.5 125 63.2
FvH4_4g21260 Fragaria vesca HOM05D006846 ORTHO05D008473 9.9e-40 167.2 135 63.7
Nitab4.5_0007474g0050 Nicotiana tabacum HOM05D006846 ORTHO05D008473 9.9e-40 167.2 120 66.7
Carub.0005s0005 Capsella rubella HOM05D006846 ORTHO05D008473 1.3e-39 166.8 112 69.6
CARHR290870 Cardamine hirsuta HOM05D006846 ORTHO05D008473 1.3e-39 166.8 115 67.8
Gohir.D09G242700 Gossypium hirsutum HOM05D006846 ORTHO05D008473 1.3e-39 166.8 119 68.9
Gorai.006G266400 Gossypium raimondii HOM05D006846 ORTHO05D008473 1.3e-39 166.8 119 68.9
Lj6A699T67 Lonicera japonica HOM05D006846 ORTHO05D008473 1.7e-39 166.4 115 68.7
Potri.008G099700 Populus trichocarpa HOM05D006846 ORTHO05D008473 1.7e-39 166.4 151 56.3
THA.LOC104821808 Tarenaya hassleriana HOM05D006846 ORTHO05D008473 1.7e-39 166.4 137 59.9
Manes.03G210800 Manihot esculenta HOM05D006846 ORTHO05D008473 2.2e-39 166.0 116 69.0
SEGI_09291 Sequoiadendron giganteum HOM05D006846 ORTHO05D008473 2.9e-39 165.6 128 64.8
Carub.0001s3726 Capsella rubella HOM05D003832 ORTHO05D004365 3.7e-39 165.2 108 71.3
Ciclev10007018m.g Citrus clementina HOM05D006846 ORTHO05D008473 3.7e-39 165.2 121 65.3
Hma1.2p1_0013F.1_g007970 Hydrangea macrophylla HOM05D006846 ORTHO05D008473 3.7e-39 165.2 113 70.8
Peaxi162Scf00579g00010 Petunia axillaris HOM05D006846 ORTHO05D008473 3.7e-39 165.2 136 58.8
ECA233G5003 Erigeron canadensis HOM05D006846 ORTHO05D008473 4.9e-39 164.9 116 67.2
Sabra08G0075400 Salix brachista HOM05D006846 ORTHO05D008473 4.9e-39 164.9 159 54.7
MSTRG.14213 Avicennia marina HOM05D006846 ORTHO05D008473 8.3e-39 164.1 137 60.6
Nitab4.5_0007368g0030 Nicotiana tabacum HOM05D006846 ORTHO05D008473 8.3e-39 164.1 120 65.8
Os12g0182800 Oryza sativa ssp. japonica HOM05D006846 ORTHO05D008473 8.3e-39 164.1 151 56.3
SGA_v2.0_scaffold127G34033 Striga asiatica HOM05D006846 ORTHO05D008473 1.1e-38 163.7 145 60.0
PSO339G5299 Papaver somniferum HOM05D006846 ORTHO05D008473 1.4e-38 163.3 121 66.1
AUR62019042 Chenopodium quinoa HOM05D006846 ORTHO05D008473 2.4e-38 162.5 115 67.0
Solyc06g053470.3 Solanum lycopersicum HOM05D006846 ORTHO05D008473 2.4e-38 162.5 133 61.7
Sopen06g018550 Solanum pennellii HOM05D006846 ORTHO05D008473 2.4e-38 162.5 133 61.7
PGSC0003DMG400016299 Solanum tuberosum HOM05D006846 ORTHO05D008473 2.4e-38 162.5 133 61.7
HanXRQChr09g0246471 Helianthus annuus HOM05D006846 ORTHO05D008473 3.2e-38 162.2 132 58.3
CARHR037810 Cardamine hirsuta HOM05D006846 ORTHO05D008473 7.1e-38 161.0 114 65.8
AUR62027881 Chenopodium quinoa HOM05D006846 ORTHO05D008473 7.1e-38 161.0 115 67.8
Sc23g0000700 Simmondsia chinensis HOM05D006846 ORTHO05D008473 7.1e-38 161.0 123 61.8
Zm00001eb359370 Zea mays HOM05D006846 ORTHO05D008473 1.6e-37 159.8 162 51.9
Rhsim04G0247300 Rhododendron simsii HOM05D006846 ORTHO05D008473 2.1e-37 159.5 139 58.3
MBI11_g10320_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 2.7e-37 159.1 111 68.5
Cfa015953 Carpinus fangiana HOM05D006846 ORTHO05D008473 4.6e-37 158.3 134 61.9
CANSAT01G2167 Cannabis sativa HOM05D006846 ORTHO05D008473 6.0e-37 157.9 131 59.5
PSO384G1587 Papaver somniferum HOM05D006846 ORTHO05D008473 1.0e-36 157.1 155 56.1
Aqoxy1G00358 Aquilegia oxysepala HOM05D006846 ORTHO05D008473 1.3e-36 156.8 123 65.9
Dinv29523 Davidia involucrata HOM05D006846 ORTHO05D008473 3.0e-36 155.6 115 64.3
SGA_v2.0_scaffold127G34034 Striga asiatica HOM05D006846 ORTHO05D008473 3.0e-36 155.6 148 57.4
SGA_v2.0_scaffold64G22040 Striga asiatica HOM05D006846 ORTHO05D008473 3.0e-36 155.6 166 51.2
EL10Ac1g01060 Beta vulgaris HOM05D006846 ORTHO05D008473 6.6e-36 154.5 143 56.6
FAN12G0803 Fragaria x ananassa HOM05D006846 ORTHO05D008473 6.6e-36 154.5 160 53.8
vmacro08003 Vaccinium macrocarpon HOM05D006846 ORTHO05D008473 7.3e-35 151.0 168 48.2
CAN.G136.4 Capsicum annuum HOM05D006846 ORTHO05D008473 1.2e-34 150.2 120 60.0
TWI73G0996 Tripterygium wilfordii HOM05D006846 ORTHO05D008473 4.4e-32 141.7 122 57.4
arahy.Tifrunner.gnm1.ann1.EYUN0W Arachis hypogaea HOM05D000385 ORTHO05D000269 1.4e-30 136.7 137 52.6
QL11p040346 Quercus lobata HOM05D006846 ORTHO05D008473 1.9e-30 136.3 144 53.5
COL.COLO4_34545 Corchorus olitorius HOM05D005582 ORTHO05D007028 4.1e-30 135.2 89 74.2
unitig_744.g24645 Utricularia gibba HOM05D006846 ORTHO05D008473 7.1e-30 134.4 120 57.5
Haze_00535 Corylus avellana HOM05D006846 ORTHO05D008473 1.6e-29 133.3 134 54.5
SalBow8G5328 Salvia bowleyana HOM05D006846 ORTHO05D008473 2.1e-29 132.9 133 52.6
Haze_00536 Corylus avellana HOM05D006846 ORTHO05D008473 6.0e-29 131.3 134 53.7
Cc03_g00240 Coffea canephora HOM05D006846 ORTHO05D008473 1.0e-28 130.6 86 68.6
Dinv29521 Davidia involucrata HOM05D006846 ORTHO05D008473 7.3e-27 124.4 103 60.2
MD16G1146600 Malus domestica HOM05D006846 ORTHO05D008473 9.6e-27 124.0 118 54.2
Nn4g26496 Nelumbo nucifera HOM05D006846 ORTHO05D008473 9.6e-27 124.0 121 54.5
MBI18_g09611_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 6.9e-25 117.9 101 59.4
HPP92_004479 Vanilla planifolia HOM05D006846 ORTHO05D008473 2.0e-24 116.3 87 63.2
Gohir.A09G242000 Gossypium hirsutum HOM05D006846 ORTHO05D008473 3.4e-24 115.5 144 47.9
Pp3c9_17660 Physcomitrium patens HOM05D006846 ORTHO05D008473 5.8e-24 114.8 113 46.9
CSS0050245 Camellia sinensis var. sinensis HOM05D006846 ORTHO05D008473 1.3e-23 113.6 102 55.9
Glyma.09G078800 Glycine max HOM05D006846 ORTHO05D008473 1.3e-23 113.6 70 84.3
Mapoly0021s0070 Marchantia polymorpha HOM05D006846 ORTHO05D008473 6.4e-23 111.3 114 45.6
Lsat_1_v5_gn_6_71441 Lactuca sativa HOM05D006846 ORTHO05D008473 2.4e-22 109.4 117 47.9
TAR365G0638 Trochodendron aralioides HOM05D006846 ORTHO05D008473 3.5e-21 105.5 92 59.8
ClCG04G007450 Citrullus lanatus HOM05D006846 ORTHO05D008473 6.0e-21 104.8 87 63.2
ATR0693G432 Amborella trichopoda HOM05D006846 ORTHO05D008473 1.3e-18 97.1 75 58.7
CSS0047848 Camellia sinensis var. sinensis HOM05D006846 ORTHO05D008473 4.8e-18 95.1 60 76.7
Cpa.g.sc146.38 Carica papaya HOM05D006846 ORTHO05D008473 1.8e-12 76.6 48 77.1
Zm00001eb158200 Zea mays HOM05D006846 ORTHO05D008473 9.6e-11 70.9 84 46.4
Cre04.g216300 Chlamydomonas reinhardtii HOM05D006846 ORTHO05D008473 6.2e-10 68.2 102 35.3
MBI19_g16347_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 1.8e-09 66.6 99 43.4
Dinv18032 Davidia involucrata HOM05D006846 ORTHO05D008473 9.0e-09 64.3 85 47.1
Hma1.2p1_0013F.1_g007960 Hydrangea macrophylla HOM05D006846 ORTHO05D008473 2.0e-08 63.2 48 58.3


User provided reference genes

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