Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g013000 Pisum sativum HOM05D006042 ORTHO05D007658 5.5e-170 600.9 307 100.0
TPR.G32447 Trifolium pratense HOM05D006042 ORTHO05D007658 1.3e-139 500.0 286 89.9
Ca_30067_v3 Cicer arietinum L. HOM05D006042 ORTHO05D007658 5.0e-131 471.5 283 84.5
Medtr6g017260 Medicago truncatula HOM05D006042 ORTHO05D007658 1.0e-128 463.8 288 85.8
Lj2g0022623 Lotus japonicus HOM05D006042 ORTHO05D007658 1.7e-115 419.9 295 77.6
Lalb_Chr06g0174661 Lupinus albus HOM05D006042 ORTHO05D007658 3.6e-113 412.1 286 78.3
Ca_26178_v3 Cicer arietinum L. HOM05D006042 ORTHO05D007658 6.8e-112 407.9 247 84.6
Glyma.19G045600 Glycine max HOM05D006042 ORTHO05D007658 1.2e-111 407.1 292 75.3
VMungo0464G1707 Vigna mungo HOM05D006042 ORTHO05D007658 1.2e-111 407.1 288 74.0
Phvul.004G063000 Phaseolus vulgaris HOM05D006042 ORTHO05D007658 1.7e-110 403.3 288 74.7
arahy.Tifrunner.gnm1.ann1.TWH6SW Arachis hypogaea HOM05D006042 ORTHO05D007658 1.9e-106 389.8 289 73.0
Manes.02G066700 Manihot esculenta HOM05D006042 ORTHO05D007658 5.8e-95 351.7 248 74.2
CARHR214100 Cardamine hirsuta HOM05D006042 ORTHO05D007658 7.6e-95 351.3 225 79.6
Atru.chr8.825 Acer truncatum HOM05D006042 ORTHO05D007658 1.3e-94 350.5 276 68.8
AL7G51880 Arabidopsis lyrata HOM05D006042 ORTHO05D007658 1.3e-94 350.5 225 79.6
CSS0008868 Camellia sinensis var. sinensis HOM05D006042 ORTHO05D007658 1.3e-94 350.5 276 69.9
Oeu030760.1 Olea europaea HOM05D006042 ORTHO05D007658 1.3e-94 350.5 216 82.4
Ciclev10012434m.g Citrus clementina HOM05D006042 ORTHO05D007658 1.7e-94 350.1 225 79.6
Potri.004G102100 Populus trichocarpa HOM05D006042 ORTHO05D007658 1.1e-93 347.4 225 76.9
Thhalv10027870m.g Eutrema salsugineum HOM05D006042 ORTHO05D007658 3.2e-93 345.9 223 78.9
Gohir.A11G162500 Gossypium hirsutum HOM05D006042 ORTHO05D007658 3.2e-93 345.9 224 78.1
Carub.0007s3720 Capsella rubella HOM05D006042 ORTHO05D007658 4.2e-93 345.5 224 78.1
Sp1g29720 Schrenkiella parvula HOM05D006042 ORTHO05D007658 4.2e-93 345.5 224 78.6
CiPaw.03G059800 Carya illinoinensis HOM05D006042 ORTHO05D007658 5.4e-93 345.1 297 63.0
ClCG11G005350 Citrullus lanatus HOM05D006042 ORTHO05D007658 7.1e-93 344.7 221 80.1
CANSAT64G1085 Cannabis sativa HOM05D006042 ORTHO05D007658 9.3e-93 344.4 257 69.3
Solyc03g034170.4 Solanum lycopersicum HOM05D006042 ORTHO05D007658 9.3e-93 344.4 217 79.3
Gorai.007G180300 Gossypium raimondii HOM05D006042 ORTHO05D007658 1.6e-92 343.6 224 77.7
Sopen03g006950 Solanum pennellii HOM05D006042 ORTHO05D007658 1.6e-92 343.6 217 78.8
BcaC08g44400 Brassica carinata HOM05D006042 ORTHO05D007658 2.1e-92 343.2 225 78.2
Gohir.D11G168732 Gossypium hirsutum HOM05D006042 ORTHO05D007658 2.1e-92 343.2 224 77.2
Actinidia26288 Actinidia chinensis HOM05D006042 ORTHO05D007658 2.7e-92 342.8 217 81.6
CsaV3_5G039130 Cucumis sativus L. HOM05D006042 ORTHO05D007658 2.7e-92 342.8 222 79.7
MD17G1074400 Malus domestica HOM05D006042 ORTHO05D007658 3.5e-92 342.4 289 65.7
THA.LOC104805550 Tarenaya hassleriana HOM05D006042 ORTHO05D007658 4.6e-92 342.0 292 66.4
MD09G1084900 Malus domestica HOM05D006042 ORTHO05D007658 6.0e-92 341.7 266 69.2
PGSC0003DMG400019582 Solanum tuberosum HOM05D006042 ORTHO05D007658 6.0e-92 341.7 217 78.3
Aqoxy3G03922 Aquilegia oxysepala HOM05D006042 ORTHO05D007658 1.0e-91 340.9 260 68.8
C06p18330 Brassica napus HOM05D006042 ORTHO05D007658 1.0e-91 340.9 225 77.3
BolC6t37045H Brassica oleracea HOM05D006042 ORTHO05D007658 1.0e-91 340.9 225 77.3
QL02p052540 Quercus lobata HOM05D006042 ORTHO05D007658 1.0e-91 340.9 286 64.3
GSVIVG01036442001 Vitis vinifera HOM05D006042 ORTHO05D007658 1.0e-91 340.9 219 79.5
Hma1.2p1_0550F.1_g177265 Hydrangea macrophylla HOM05D006042 ORTHO05D007658 1.3e-91 340.5 217 78.3
Potri.017G112700 Populus trichocarpa HOM05D006042 ORTHO05D007658 1.3e-91 340.5 260 70.8
CAN.G995.2 Capsicum annuum HOM05D006042 ORTHO05D007658 1.7e-91 340.1 277 65.7
Thecc.04G137400 Theobroma cacao HOM05D006042 ORTHO05D007658 3.0e-91 339.3 225 77.8
A07p19810 Brassica napus HOM05D006042 ORTHO05D007658 3.9e-91 339.0 223 77.6
BraA07t29682Z Brassica rapa HOM05D006042 ORTHO05D007658 3.9e-91 339.0 223 77.6
FvH4_6g45340 Fragaria vesca HOM05D006042 ORTHO05D007658 5.1e-91 338.6 298 62.4
FAN14G4491 Fragaria x ananassa HOM05D006042 ORTHO05D007658 5.1e-91 338.6 298 62.4
Nitab4.5_0002489g0020 Nicotiana tabacum HOM05D006042 ORTHO05D007658 5.1e-91 338.6 218 78.9
Duzib138G1312 Durio zibethinus HOM05D006042 ORTHO05D007658 6.6e-91 338.2 221 77.4
Nitab4.5_0004721g0010 Nicotiana tabacum HOM05D006042 ORTHO05D007658 6.6e-91 338.2 218 78.4
Zm00001eb042940 Zea mays HOM05D006042 ORTHO05D007658 6.6e-91 338.2 236 73.3
Eucgr.F02481 Eucalyptus grandis HOM05D006042 ORTHO05D007658 8.7e-91 337.8 278 66.2
PSO063G0034 Papaver somniferum HOM05D006042 ORTHO05D007658 8.7e-91 337.8 261 68.6
Cc07_g09000 Coffea canephora HOM05D006042 ORTHO05D007658 2.5e-90 336.3 216 78.2
BcaB02g07998 Brassica carinata HOM05D006042 ORTHO05D007658 7.4e-90 334.7 225 76.4
PSO782G1563 Papaver somniferum HOM05D006042 ORTHO05D007658 7.4e-90 334.7 261 68.6
FAN09G0627 Fragaria x ananassa HOM05D006042 ORTHO05D007658 9.6e-90 334.3 297 62.0
PGR004G1523 Punica granatum HOM05D006042 ORTHO05D007658 1.3e-89 334.0 213 77.0
TWI53G1226 Tripterygium wilfordii HOM05D006042 ORTHO05D007658 2.1e-89 333.2 216 76.4
Migut.H00201 Erythranthe guttata HOM05D006042 ORTHO05D007658 3.6e-89 332.4 218 76.6
FAN05G0122 Fragaria x ananassa HOM05D006042 ORTHO05D007658 1.4e-88 330.5 297 61.3
Cfa007944 Carpinus fangiana HOM05D006042 ORTHO05D007658 1.8e-88 330.1 279 65.6
Prupe.3G239600 Prunus persica HOM05D006042 ORTHO05D007658 1.8e-88 330.1 226 75.2
Os08g0359000 Oryza sativa ssp. japonica HOM05D006042 ORTHO05D007658 2.4e-88 329.7 223 74.0
COL.COLO4_16190 Corchorus olitorius HOM05D002377 ORTHO05D007658 5.3e-88 328.6 203 82.3
MBI09_g41181_MAGBIO Magnolia biondii HOM05D006042 ORTHO05D007658 6.9e-88 328.2 292 63.4
RcHm_v2.0_Chr2g0163121 Rosa chinensis HOM05D006042 ORTHO05D007658 9.0e-88 327.8 300 60.7
arahy.Tifrunner.gnm1.ann1.4I03R9 Arachis hypogaea HOM05D006042 ORTHO05D007658 1.5e-87 327.0 278 64.7
Sc10g0001330 Simmondsia chinensis HOM05D006042 ORTHO05D007658 2.6e-87 326.2 265 63.4
MSTRG.2747 Avicennia marina HOM05D006042 ORTHO05D007658 7.6e-87 324.7 282 62.4
DCAR_009854 Daucus carota HOM05D006042 ORTHO05D007658 1.7e-86 323.6 217 76.5
HanXRQChr14g0438681 Helianthus annuus HOM05D006042 ORTHO05D007658 1.7e-86 323.6 289 62.6
Lsat_1_v5_gn_4_153081 Lactuca sativa HOM05D006042 ORTHO05D007658 1.4e-85 320.5 224 73.7
ATR0589G121 Amborella trichopoda HOM05D006042 ORTHO05D007658 1.9e-85 320.1 263 66.5
ECA232G3341 Erigeron canadensis HOM05D006042 ORTHO05D007658 1.9e-85 320.1 216 75.0
SalBow3G2575 Salvia bowleyana HOM05D006042 ORTHO05D007658 1.9e-85 320.1 283 62.5
SalBow3G3727 Salvia bowleyana HOM05D006042 ORTHO05D007658 1.9e-85 320.1 283 62.5
AUR62014538 Chenopodium quinoa HOM05D006042 ORTHO05D007658 9.3e-85 317.8 183 83.6
FAN02G0945 Fragaria x ananassa HOM05D006042 ORTHO05D007658 2.1e-84 316.6 296 60.5
AT5G38660 Arabidopsis thaliana HOM05D006042 ORTHO05D007658 2.7e-84 316.2 200 79.0
AUR62008965 Chenopodium quinoa HOM05D006042 ORTHO05D007658 3.0e-83 312.8 184 81.5
Hund16127 Selenicereus undatus HOM05D006042 ORTHO05D007658 2.5e-82 309.7 228 69.3
Sed0018352 Sechium edule HOM05D006042 ORTHO05D007658 2.8e-81 306.2 212 75.5
Mapoly0019s0052 Marchantia polymorpha HOM05D006042 ORTHO05D007658 3.1e-80 302.8 215 69.8
Lj2C447G3 Lonicera japonica HOM05D006042 ORTHO05D007658 4.0e-80 302.4 173 85.0
Rhsim08G0079500 Rhododendron simsii HOM05D006042 ORTHO05D007658 6.9e-80 301.6 245 66.1
vmacro18106 Vaccinium macrocarpon HOM05D006042 ORTHO05D007658 9.0e-80 301.2 170 85.9
Aa31LG9G16960 Aethionema arabicum HOM05D006042 ORTHO05D007658 7.6e-79 298.1 225 69.3
SEGI_07967 Sequoiadendron giganteum HOM05D006042 ORTHO05D007658 1.0e-78 297.7 191 77.0
HPP92_008047 Vanilla planifolia HOM05D006042 ORTHO05D007658 6.5e-78 295.0 233 65.7
AagrBONN_evm.TU.Sc2ySwM_340.223 Anthoceros agrestis HOM05D000513 ORTHO05D003825 6.0e-76 288.5 192 74.0
Sabra04G0078300 Salix brachista HOM05D006042 ORTHO05D007658 1.3e-75 287.3 318 53.5
Pp3c4_3720 Physcomitrium patens HOM05D006042 ORTHO05D007658 3.0e-75 286.2 221 70.1
SGA_v2.0_scaffold49G18090 Striga asiatica HOM05D006042 ORTHO05D007658 1.5e-74 283.9 185 76.8
SMO232G0004 Selaginella moellendorffii HOM05D006042 ORTHO05D007658 6.3e-73 278.5 202 70.3
EL10Ac2g04605 Beta vulgaris HOM05D006042 ORTHO05D007658 1.3e-70 270.8 194 73.2
CDE09G0042 Ceratophyllum demersum HOM05D006042 ORTHO05D007658 1.1e-69 267.7 194 70.1
CBR_g44937 Chara braunii HOM05D006042 ORTHO05D007658 1.6e-68 263.8 213 60.1
Nn3g17761 Nelumbo nucifera HOM05D006042 ORTHO05D007658 1.1e-66 257.7 219 63.5
Dinv34847 Davidia involucrata HOM05D006042 ORTHO05D007658 1.2e-63 247.7 227 59.9
Hma1.2p1_0550F.1_g177260 Hydrangea macrophylla HOM05D006042 ORTHO05D007658 7.7e-63 245.0 160 77.5
Cpa.g.sc179.22 Carica papaya HOM05D006042 ORTHO05D007658 4.2e-53 212.6 275 50.9
Peaxi162Scf00751g00624 Petunia axillaris HOM05D006042 ORTHO05D007658 1.0e-51 208.0 121 81.0
MELO3C022088.2 Cucumis melo HOM05D006042 ORTHO05D007658 1.4e-51 207.6 223 57.8
PRCOL_00000779 Prasinoderma coloniale HOM05D006042 ORTHO05D007658 8.2e-49 198.4 192 53.1
MBI09_g40289_MAGBIO Magnolia biondii HOM05D006042 ORTHO05D007658 1.3e-46 191.0 135 71.9
BcaC02g09662 Brassica carinata HOM05D006042 ORTHO05D007658 1.2e-44 184.5 212 53.3
Cre16.g665250 Chlamydomonas reinhardtii HOM05D006042 ORTHO05D007658 3.6e-44 183.0 186 53.2
MCO16G088 Micromonas commoda HOM05D006042 ORTHO05D007658 2.0e-42 177.2 194 45.9
BolC3t18613H Brassica oleracea HOM05D006042 ORTHO05D032368 8.2e-41 171.8 97 83.5
BolC5t30891H Brassica oleracea HOM05D006042 ORTHO05D007658 5.3e-40 169.1 97 82.5
GSVIVG01026074001 Vitis vinifera HOM05D006042 ORTHO05D007658 2.0e-39 167.2 121 71.1
TAR278G0002 Trochodendron aralioides HOM05D006042 ORTHO05D007658 1.1e-37 161.4 114 72.8
C04p45290 Brassica napus HOM05D006042 ORTHO05D007658 1.3e-33 147.9 266 40.6
unitig_0.g9 Utricularia gibba HOM05D006042 ORTHO05D007658 1.6e-31 141.0 80 81.2
Cpa.g.sc179.23 Carica papaya HOM05D006042 ORTHO05D007658 3.5e-31 139.8 78 83.3
Haze_14130 Corylus avellana HOM05D006042 ORTHO05D007658 3.6e-28 129.8 77 83.1
GSVIVG01027526001 Vitis vinifera HOM05D006042 ORTHO05D007658 6.1e-28 129.0 78 79.5
BolC4t26112H Brassica oleracea HOM05D006042 ORTHO05D007658 1.0e-27 128.3 74 81.1
Haze_14131 Corylus avellana HOM05D006042 ORTHO05D007658 2.3e-27 127.1 175 49.7
QL02p057613 Quercus lobata HOM05D006042 ORTHO05D007658 1.0e-19 101.7 70 70.0
Sabra17G0093400 Salix brachista HOM05D006042 ORTHO05D007658 4.4e-18 96.3 79 68.4
Ah.16g101960 Amaranthus hybridus HOM05D000095 ORTHO05D000330 2.4e-16 90.5 57 77.2
CARHR262580 Cardamine hirsuta HOM05D006042 ORTHO05D007658 4.1e-16 89.7 140 47.1
BcaC05g29172 Brassica carinata HOM05D006042 ORTHO05D032368 9.2e-16 88.6 50 82.0
C02p54890 Brassica napus HOM05D006042 ORTHO05D032368 1.2e-15 88.2 51 80.4
Phvul.004G063400 Phaseolus vulgaris HOM05D002377 ORTHO05D002656 1.6e-12 77.8 55 69.1
Peaxi162Scf00104g00074 Petunia axillaris HOM05D006042 ORTHO05D007658 2.1e-12 77.4 48 75.0
Phvul.004G063200 Phaseolus vulgaris HOM05D002377 ORTHO05D002656 1.0e-11 75.1 47 74.5
VMungo0464G0819 Vigna mungo HOM05D006042 ORTHO05D007658 3.2e-08 63.5 47 66.0
Cpa.g.sc179.24 Carica papaya HOM05D006042 ORTHO05D007658 4.6e-07 59.7 41 73.2


User provided reference genes

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