Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g011440 Pisum sativum HOM05D007991 ORTHO05D010158 7.8e-39 163.7 107 100.0
TPR.G9765 Trifolium pratense HOM05D007991 ORTHO05D010158 4.2e-32 141.4 107 70.1
Ca_03685_v3 Cicer arietinum L. HOM05D007991 ORTHO05D010158 3.5e-31 138.3 109 67.9
Medtr2g069650 Medicago truncatula HOM05D007991 ORTHO05D010158 7.8e-31 137.1 107 67.3
Lalb_Chr19g0133391 Lupinus albus HOM05D007991 ORTHO05D010158 2.1e-23 112.5 105 59.0
Lj3g0014492 Lotus japonicus HOM05D007991 ORTHO05D010158 6.0e-23 110.9 114 70.2
Ciclev10023629m.g Citrus clementina HOM05D007991 ORTHO05D010158 4.5e-18 94.7 54 87.0
Prupe.4G140900 Prunus persica HOM05D007991 ORTHO05D010158 4.5e-18 94.7 56 80.4
Cpa.g.sc10.36 Carica papaya HOM05D007991 ORTHO05D010158 1.7e-17 92.8 58 77.6
RcHm_v2.0_Chr5g0026701 Rosa chinensis HOM05D007991 ORTHO05D010158 1.7e-17 92.8 58 75.9
Manes.06G170901 Manihot esculenta HOM05D007991 ORTHO05D010158 6.4e-17 90.9 53 81.1
Phvul.005G056100 Phaseolus vulgaris HOM05D007991 ORTHO05D010158 8.4e-17 90.5 57 73.7
Lalb_Chr03g0031611 Lupinus albus HOM05D007991 ORTHO05D010158 1.1e-16 90.1 55 76.4
Manes.06G170500 Manihot esculenta HOM05D007991 ORTHO05D010158 1.1e-16 90.1 53 81.1
ClCG11G016360 Citrullus lanatus HOM05D007991 ORTHO05D010158 1.9e-16 89.4 55 76.4
ClCG11G016370 Citrullus lanatus HOM05D007991 ORTHO05D010158 1.9e-16 89.4 55 76.4
Lsat_1_v5_gn_7_112301 Lactuca sativa HOM05D007991 ORTHO05D010158 2.4e-16 89.0 58 72.4
Glyma.08G172800 Glycine max HOM05D007991 ORTHO05D010158 3.2e-16 88.6 91 53.8
AT3G12960 Arabidopsis thaliana HOM05D007991 ORTHO05D010158 4.2e-16 88.2 58 70.7
MD05G1219200 Malus domestica HOM05D007991 ORTHO05D010158 4.2e-16 88.2 56 73.2
Ah.07g206310 Amaranthus hybridus HOM05D007991 ORTHO05D010158 5.5e-16 87.8 56 73.2
QL04p074011 Quercus lobata HOM05D007991 ORTHO05D010158 7.1e-16 87.4 53 77.4
Atru.chr8.1056 Acer truncatum HOM05D007991 ORTHO05D010158 9.3e-16 87.0 56 73.2
CiPaw.04G012700 Carya illinoinensis HOM05D007991 ORTHO05D010158 1.2e-15 86.7 56 73.2
GSVIVG01012568001 Vitis vinifera HOM05D007991 ORTHO05D010158 1.2e-15 86.7 56 75.0
GSVIVG01035227001 Vitis vinifera HOM05D007991 ORTHO05D010158 1.2e-15 86.7 56 75.0
CsaV3_4G031820 Cucumis sativus L. HOM05D005971 ORTHO05D007459 1.6e-15 86.3 55 72.7
AL3G24640 Arabidopsis lyrata HOM05D007991 ORTHO05D010158 2.1e-15 85.9 55 72.7
COL.COLO4_28875 Corchorus olitorius HOM05D007991 ORTHO05D010158 2.1e-15 85.9 58 70.7
Aqoxy6G00820 Aquilegia oxysepala HOM05D007991 ORTHO05D010158 2.7e-15 85.5 56 69.6
Cfa019429 Carpinus fangiana HOM05D007991 ORTHO05D010158 2.7e-15 85.5 50 82.0
MELO3C010561.2 Cucumis melo HOM05D007991 ORTHO05D010158 3.5e-15 85.1 55 72.7
PGR042G3415 Punica granatum HOM05D007991 ORTHO05D010158 3.5e-15 85.1 56 69.6
BcaC09g48284 Brassica carinata HOM05D007991 ORTHO05D010158 4.6e-15 84.7 55 72.7
C01p52180 Brassica napus HOM05D007991 ORTHO05D010158 4.6e-15 84.7 55 72.7
BolC1t05158H Brassica oleracea HOM05D007991 ORTHO05D010158 4.6e-15 84.7 55 72.7
BraA01t04089Z Brassica rapa HOM05D007991 ORTHO05D010158 4.6e-15 84.7 55 72.7
Peaxi162Scf00452g00812 Petunia axillaris HOM05D007991 ORTHO05D010158 6.0e-15 84.3 55 72.7
BcaB04g21024 Brassica carinata HOM05D007991 ORTHO05D010158 7.9e-15 84.0 55 70.9
COL.COLO4_04148 Corchorus olitorius HOM05D007991 ORTHO05D010158 7.9e-15 84.0 54 74.1
Thhalv10022193m.g Eutrema salsugineum HOM05D007991 ORTHO05D010158 1.0e-14 83.6 55 72.7
Sc16g0005380 Simmondsia chinensis HOM05D007991 ORTHO05D010158 1.3e-14 83.2 55 72.7
Carub.0003s1230 Capsella rubella HOM05D007991 ORTHO05D010158 1.8e-14 82.8 55 69.1
ECA236G0423 Erigeron canadensis HOM05D007991 ORTHO05D010158 1.8e-14 82.8 58 67.2
Solyc07g066400.1 Solanum lycopersicum HOM05D007991 ORTHO05D010158 1.8e-14 82.8 53 73.6
Gorai.007G003200 Gossypium raimondii HOM05D007991 ORTHO05D010158 2.3e-14 82.4 56 71.4
Nn7g37867 Nelumbo nucifera HOM05D007991 ORTHO05D010158 2.3e-14 82.4 54 72.2
TWI39G0184 Tripterygium wilfordii HOM05D007991 ORTHO05D010158 2.3e-14 82.4 55 69.1
Gohir.A11G002600 Gossypium hirsutum HOM05D007991 ORTHO05D010158 3.0e-14 82.0 56 71.4
PGSC0003DMG400022239 Solanum tuberosum HOM05D007991 ORTHO05D010158 3.0e-14 82.0 53 73.6
Aa31LG8G190 Aethionema arabicum HOM05D007991 ORTHO05D010158 5.1e-14 81.3 55 69.1
FAN16G1552 Fragaria x ananassa HOM05D007991 ORTHO05D010158 5.1e-14 81.3 56 73.2
SalBow2G0434 Salvia bowleyana HOM05D007991 ORTHO05D010158 5.1e-14 81.3 53 73.6
Sp3g11110 Schrenkiella parvula HOM05D007991 ORTHO05D010158 5.1e-14 81.3 58 67.2
CANSAT80G1088 Cannabis sativa HOM05D007991 ORTHO05D010158 8.7e-14 80.5 49 77.6
CARHR087490 Cardamine hirsuta HOM05D007991 ORTHO05D010158 8.7e-14 80.5 55 70.9
Sopen07g034570 Solanum pennellii HOM05D007991 ORTHO05D010158 8.7e-14 80.5 53 73.6
EL10Ac4g08566 Beta vulgaris HOM05D007991 ORTHO05D010158 1.1e-13 80.1 56 66.1
CAN.G943.33 Capsicum annuum HOM05D007991 ORTHO05D010158 1.5e-13 79.7 53 69.8
FAN25G2658 Fragaria x ananassa HOM05D007991 ORTHO05D010158 1.9e-13 79.3 56 71.4
FAN11G2864 Fragaria x ananassa HOM05D007991 ORTHO05D010158 2.5e-13 79.0 56 71.4
FAN21G1902 Fragaria x ananassa HOM05D007991 ORTHO05D010158 2.5e-13 79.0 56 71.4
Gohir.D11G002200 Gossypium hirsutum HOM05D007991 ORTHO05D010158 4.3e-13 78.2 56 67.9
HanXRQChr11g0334671 Helianthus annuus HOM05D007991 ORTHO05D010158 4.3e-13 78.2 58 63.8
CSS0001388 Camellia sinensis var. sinensis HOM05D007991 ORTHO05D010158 9.6e-13 77.0 58 65.5
Sed0025657 Sechium edule HOM05D007991 ORTHO05D010158 2.8e-12 75.5 55 65.5
MBI02_g12653_MAGBIO Magnolia biondii HOM05D007991 ORTHO05D010158 6.2e-12 74.3 56 62.5
unitig_8.g4768 Utricularia gibba HOM05D007991 ORTHO05D010158 2.4e-11 72.4 58 62.1
Duzib205G1447 Durio zibethinus HOM05D007991 ORTHO05D010158 3.1e-11 72.0 52 61.5
PSO675G0275 Papaver somniferum HOM05D007991 ORTHO05D010158 9.0e-11 70.5 58 60.3
CSS0033446 Camellia sinensis var. sinensis HOM05D007991 ORTHO05D010158 2.0e-10 69.3 55 63.6
MD05G1300500 Malus domestica HOM05D007991 ORTHO05D010158 4.5e-10 68.2 48 70.8
Nn4g23994 Nelumbo nucifera HOM05D007991 ORTHO05D010158 4.5e-10 68.2 56 60.7
Nitab4.5_0008437g0010 Nicotiana tabacum HOM05D007991 ORTHO05D010158 7.6e-10 67.4 53 64.2
Os08g0104400 Oryza sativa ssp. japonica HOM05D007991 ORTHO05D010158 3.5e-07 58.5 59 47.5
Zm00001eb260130 Zea mays HOM05D007991 ORTHO05D010158 6.7e-06 54.3 55 52.7


User provided reference genes

Program Settings