Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g007360 Pisum sativum HOM05D010840 ORTHO05D009787 2.3e-194 682.2 379 100.0
Psat1g007320 Pisum sativum HOM05D010840 ORTHO05D009787 4.6e-142 508.4 383 80.7
TPR.G12768 Trifolium pratense HOM05D010840 ORTHO05D009787 1.9e-111 406.8 398 63.8
Medtr2g098610 Medicago truncatula HOM05D010840 ORTHO05D009787 3.1e-106 389.4 463 58.1
Medtr2g098620 Medicago truncatula HOM05D010840 ORTHO05D009787 1.7e-91 340.5 466 55.6
TPR.G18857 Trifolium pratense HOM05D010840 ORTHO05D009787 2.6e-89 333.2 465 52.0
Ca_01266_v3 Cicer arietinum L. HOM05D010840 ORTHO05D009787 3.1e-74 283.1 440 43.4
arahy.Tifrunner.gnm1.ann1.JQ8CCA Arachis hypogaea HOM05D010840 ORTHO05D009787 3.1e-37 160.2 447 33.1
Lalb_Chr22g0352191 Lupinus albus HOM05D010840 ORTHO05D009787 3.4e-36 156.8 369 39.0
arahy.Tifrunner.gnm1.ann1.0UQ2B1 Arachis hypogaea HOM05D010840 ORTHO05D009787 3.2e-26 123.6 394 31.0
Lalb_Chr24g0396871 Lupinus albus HOM05D010840 ORTHO05D009787 1.6e-22 111.3 537 29.1
Lj3g0021471 Lotus japonicus HOM05D010840 ORTHO05D009787 2.8e-22 110.5 416 28.4
Phvul.005G152200 Phaseolus vulgaris HOM05D010840 ORTHO05D009787 1.8e-21 107.8 242 39.7
QL10p048331 Quercus lobata HOM05D008213 ORTHO05D009787 6.4e-19 99.4 147 40.8
Glyma.15G030900 Glycine max HOM05D010840 ORTHO05D009787 1.6e-17 94.7 358 36.0
Glyma.13G343400 Glycine max HOM05D010840 ORTHO05D009787 6.6e-16 89.4 144 46.5
Glyma.12G053300 Glycine max HOM05D010840 ORTHO05D009787 2.1e-14 84.3 224 33.5
VMungo1127G1898 Vigna mungo HOM05D010840 ORTHO05D009787 2.8e-14 84.0 212 34.9
Phvul.011G055300 Phaseolus vulgaris HOM05D010840 ORTHO05D009787 3.4e-12 77.0 263 30.4
VMungo1080G1829 Vigna mungo HOM05D002632 ORTHO05D002881 4.5e-12 76.6 143 40.6
Glyma.11G128800 Glycine max HOM05D010840 ORTHO05D009787 1.7e-11 74.7 156 38.5
Prupe.1G190600 Prunus persica HOM05D008213 ORTHO05D009787 1.4e-10 71.6 143 35.7
Thecc.04G185000 Theobroma cacao HOM05D008213 ORTHO05D009787 3.2e-10 70.5 127 33.1
CiPaw.01G101800 Carya illinoinensis HOM05D008213 ORTHO05D009787 2.7e-09 67.4 138 33.3
Duzib151G0756 Durio zibethinus HOM05D008213 ORTHO05D009787 1.8e-08 64.7 142 33.8
Hma1.2p1_0754F.1_g213080 Hydrangea macrophylla HOM05D008213 ORTHO05D009787 1.5e-07 61.6 142 35.9
AUR62015410 Chenopodium quinoa HOM05D022167 ORTHO05D009787 4.3e-07 60.1 140 29.3
GSVIVG01010744001 Vitis vinifera HOM05D008213 ORTHO05D009787 4.3e-07 60.1 259 29.7
RcHm_v2.0_Chr4g0407081 Rosa chinensis HOM05D008213 ORTHO05D009787 5.6e-07 59.7 142 32.4
AUR62002285 Chenopodium quinoa HOM05D022167 ORTHO05D009787 1.6e-06 58.2 140 28.6
Potri.007G127200 Populus trichocarpa HOM05D008213 ORTHO05D009787 2.1e-06 57.8 119 32.8
Ah.07g201850 Amaranthus hybridus HOM05D022167 ORTHO05D009787 4.8e-06 56.6 139 28.8


User provided reference genes

Program Settings