Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g003480 Pisum sativum HOM05D002385 ORTHO05D002245 4.7e-35 150.6 73 100.0
Psat1g003560 Pisum sativum HOM05D002385 ORTHO05D002245 1.2e-30 136.0 74 87.8
TPR.G9750 Trifolium pratense HOM05D002385 ORTHO05D002245 1.3e-29 132.5 73 83.6
Ca_03672_v3 Cicer arietinum L. HOM05D002385 ORTHO05D002245 9.4e-28 126.3 73 82.2
Medtr2g069400 Medicago truncatula HOM05D002385 ORTHO05D002245 1.2e-27 125.9 73 79.5
arahy.Tifrunner.gnm1.ann1.3UW96L Arachis hypogaea HOM05D002385 ORTHO05D002245 2.9e-21 104.8 73 75.3
Glyma.08G170700 Glycine max HOM05D002385 ORTHO05D002245 2.9e-21 104.8 75 76.0
Lj3g0007335 Lotus japonicus HOM05D002385 ORTHO05D002245 2.9e-21 104.8 77 68.8
Glyma.15G256300 Glycine max HOM05D002385 ORTHO05D002245 6.6e-21 103.6 75 73.3
Phvul.005G057500 Phaseolus vulgaris HOM05D002385 ORTHO05D002245 2.1e-19 98.6 70 72.9
Glyma.15G256200 Glycine max HOM05D002385 ORTHO05D002245 8.0e-19 96.7 75 69.3
Lalb_Chr25g0284941 Lupinus albus HOM05D002385 ORTHO05D002245 2.6e-17 91.7 80 65.0
Glyma.15G256000 Glycine max HOM05D002385 ORTHO05D002245 2.0e-14 82.0 74 56.8
Glyma.08G171400 Glycine max HOM05D002385 ORTHO05D002245 2.7e-14 81.6 74 58.1
Glyma.08G171000 Glycine max HOM05D002385 ORTHO05D002245 5.9e-14 80.5 78 60.3
Glyma.08G170900 Glycine max HOM05D002385 ORTHO05D002245 7.8e-14 80.1 74 59.5
Psat1g011360 Pisum sativum HOM05D002385 ORTHO05D002245 2.3e-13 78.6 76 57.9
Medtr4g091090 Medicago truncatula HOM05D002385 ORTHO05D002245 2.9e-13 78.2 77 58.4
QL04p073225 Quercus lobata HOM05D002385 ORTHO05D002245 9.5e-12 73.2 64 59.4
ECA240G4719 Erigeron canadensis HOM05D002385 ORTHO05D002245 1.6e-11 72.4 68 61.8
Prupe.3G187200 Prunus persica HOM05D002385 ORTHO05D002245 1.6e-11 72.4 54 63.0
Medtr1g040735 Medicago truncatula HOM05D002385 ORTHO05D002245 2.1e-11 72.0 81 55.6
Medtr2g069430 Medicago truncatula HOM05D002385 ORTHO05D002245 2.1e-11 72.0 77 55.8
Medtr1g040775 Medicago truncatula HOM05D002385 ORTHO05D002245 4.7e-11 70.9 81 54.3
Medtr5g042360 Medicago truncatula HOM05D002385 ORTHO05D002245 4.7e-11 70.9 81 54.3
Prupe.3G187300 Prunus persica HOM05D002385 ORTHO05D002245 4.7e-11 70.9 72 52.8
Glyma.08G172300 Glycine max HOM05D002385 ORTHO05D002245 6.1e-11 70.5 74 54.1
Medtr2g069420 Medicago truncatula HOM05D002385 ORTHO05D002245 6.1e-11 70.5 80 56.2
Lj3g0003491 Lotus japonicus HOM05D002385 ORTHO05D002245 1.4e-10 69.3 81 55.6
PGSC0003DMG400019578 Solanum tuberosum HOM05D002385 ORTHO05D002245 1.4e-10 69.3 72 52.8
Glyma.08G170800 Glycine max HOM05D002385 ORTHO05D002245 1.8e-10 68.9 78 52.6
TPR.G9755 Trifolium pratense HOM05D002385 ORTHO05D002245 1.8e-10 68.9 80 55.0
Psat6g029000 Pisum sativum HOM05D002385 ORTHO05D002245 2.3e-10 68.6 77 54.5
MD17G1127900 Malus domestica HOM05D002385 ORTHO05D002245 3.1e-10 68.2 64 56.2
TPR.G9734 Trifolium pratense HOM05D002385 ORTHO05D002245 6.8e-10 67.0 76 53.9
Eucgr.A00897 Eucalyptus grandis HOM05D002385 ORTHO05D002245 8.9e-10 66.6 76 55.3
PGR031G2469 Punica granatum HOM05D002385 ORTHO05D002245 8.9e-10 66.6 72 54.2
CiPaw.11G059900 Carya illinoinensis HOM05D002385 ORTHO05D002245 2.0e-09 65.5 95 43.2
ClCG09G022550 Citrullus lanatus HOM05D002385 ORTHO05D002245 2.0e-09 65.5 80 43.8
Eucgr.A00899 Eucalyptus grandis HOM05D002385 ORTHO05D002245 2.0e-09 65.5 76 55.3
MD09G1137600 Malus domestica HOM05D002385 ORTHO05D002245 2.0e-09 65.5 60 56.7
Duzib138G1429 Durio zibethinus HOM05D002385 ORTHO05D002245 2.6e-09 65.1 77 53.2
Eucgr.A00900 Eucalyptus grandis HOM05D002385 ORTHO05D002245 2.6e-09 65.1 77 54.5
Nitab4.5_0003177g0010 Nicotiana tabacum HOM05D002385 ORTHO05D002245 3.4e-09 64.7 73 50.7
THA.LOC104822278 Tarenaya hassleriana HOM05D002385 ORTHO05D002245 3.4e-09 64.7 73 45.2
Oeu003091.1 Olea europaea HOM05D002385 ORTHO05D002245 4.4e-09 64.3 78 52.6
Ca_03673_v3 Cicer arietinum L. HOM05D002385 ORTHO05D002245 5.8e-09 63.9 68 54.4
Eucgr.A00898 Eucalyptus grandis HOM05D002385 ORTHO05D002245 7.5e-09 63.5 76 53.9
Solyc05g016060.4 Solanum lycopersicum HOM05D002385 ORTHO05D002245 9.8e-09 63.2 72 50.0
Oeu056976.2 Olea europaea HOM05D002385 ORTHO05D002245 1.3e-08 62.8 68 52.9
Sed0023256 Sechium edule HOM05D002385 ORTHO05D002245 1.7e-08 62.4 69 46.4
Sopen05g012340 Solanum pennellii HOM05D002385 ORTHO05D002245 1.7e-08 62.4 72 48.6
Lalb_Chr20g0108741 Lupinus albus HOM05D002385 ORTHO05D002245 2.2e-08 62.0 81 44.4
Peaxi162Scf00322g00010 Petunia axillaris HOM05D002385 ORTHO05D002245 2.2e-08 62.0 73 49.3
arahy.Tifrunner.gnm1.ann1.7QB2HQ Arachis hypogaea HOM05D002385 ORTHO05D002245 2.9e-08 61.6 89 46.1
COL.COLO4_07164 Corchorus olitorius HOM05D002385 ORTHO05D002245 2.9e-08 61.6 73 52.1
Migut.M01554 Erythranthe guttata HOM05D002385 ORTHO05D002245 3.7e-08 61.2 65 50.8
Eucgr.A00896 Eucalyptus grandis HOM05D002385 ORTHO05D002245 3.7e-08 61.2 71 53.5
HanXRQChr11g0335361 Helianthus annuus HOM05D002385 ORTHO05D002245 4.9e-08 60.8 74 48.6
TWI60G1403 Tripterygium wilfordii HOM05D002385 ORTHO05D002245 4.9e-08 60.8 72 54.2
Cfa023568 Carpinus fangiana HOM05D002385 ORTHO05D002245 6.4e-08 60.5 64 54.7
Oeu048064.1 Olea europaea HOM05D002385 ORTHO05D002245 6.4e-08 60.5 80 50.0
Thecc.07G152000 Theobroma cacao HOM05D021429 ORTHO05D022417 6.4e-08 60.5 67 47.8
Atru.chr11.2673 Acer truncatum HOM05D002385 ORTHO05D002245 8.3e-08 60.1 71 46.5
Haze_13593 Corylus avellana HOM05D002385 ORTHO05D002245 8.3e-08 60.1 59 57.6
GSVIVG01015781001 Vitis vinifera HOM05D002385 ORTHO05D002245 8.3e-08 60.1 65 53.8
GSVIVG01015789001 Vitis vinifera HOM05D002385 ORTHO05D002245 8.3e-08 60.1 65 53.8
Oeu012375.1 Olea europaea HOM05D002385 ORTHO05D002245 1.1e-07 59.7 76 50.0
Carub.0004s1351 Capsella rubella HOM05D002385 ORTHO05D002245 1.4e-07 59.3 50 58.0
Gohir.D07G190900 Gossypium hirsutum HOM05D002385 ORTHO05D002245 1.4e-07 59.3 79 53.2
Gorai.001G213300 Gossypium raimondii HOM05D002385 ORTHO05D002245 1.4e-07 59.3 79 53.2
Oeu048060.1 Olea europaea HOM05D002385 ORTHO05D002245 1.4e-07 59.3 78 50.0
SGA_v2.0_scaffold181G39736 Striga asiatica HOM05D003210 ORTHO05D000001 1.4e-07 59.3 77 50.6
CAN.G1202.1 Capsicum annuum HOM05D002385 ORTHO05D002245 1.9e-07 58.9 70 50.0
Potri.006G021600 Populus trichocarpa HOM05D002385 ORTHO05D002245 1.9e-07 58.9 71 50.7
Potri.016G019201 Populus trichocarpa HOM05D002385 ORTHO05D002245 1.9e-07 58.9 71 52.1
Atru.chr8.975 Acer truncatum HOM05D002385 ORTHO05D002245 2.4e-07 58.5 75 49.3
Atru.chr8.976 Acer truncatum HOM05D002385 ORTHO05D002245 2.4e-07 58.5 75 49.3
Aqoxy1G01477 Aquilegia oxysepala HOM05D002385 ORTHO05D002245 2.4e-07 58.5 68 54.4
Dinv19617 Davidia involucrata HOM05D002385 ORTHO05D002245 2.4e-07 58.5 53 58.5
RcHm_v2.0_Chr2g0153751 Rosa chinensis HOM05D002385 ORTHO05D002245 2.4e-07 58.5 64 54.7
Sed0017850 Sechium edule HOM05D002385 ORTHO05D002245 2.4e-07 58.5 69 49.3
HPP92_004187 Vanilla planifolia HOM05D002385 ORTHO05D002245 2.4e-07 58.5 84 46.4
ECA236G0309 Erigeron canadensis HOM05D002385 ORTHO05D002245 3.2e-07 58.2 80 48.8
Manes.09G073500 Manihot esculenta HOM05D002385 ORTHO05D002245 3.2e-07 58.2 69 50.7
Phvul.005G057400 Phaseolus vulgaris HOM05D002385 ORTHO05D002245 3.2e-07 58.2 64 51.6
Duzib133G0918 Durio zibethinus HOM05D002385 ORTHO05D002245 4.1e-07 57.8 79 49.4
Phvul.005G057200 Phaseolus vulgaris HOM05D002385 ORTHO05D002245 4.1e-07 57.8 66 50.0
FvH4_6g39683 Fragaria vesca HOM05D002385 ORTHO05D002245 5.4e-07 57.4 56 53.6
BraA04t17993Z Brassica rapa HOM05D002385 ORTHO05D002245 7.0e-07 57.0 67 44.8
THA.LOC109116124 Tarenaya hassleriana HOM05D002385 ORTHO05D002245 7.0e-07 57.0 69 47.8
BcaB06g28585 Brassica carinata HOM05D002385 ORTHO05D002245 9.2e-07 56.6 47 55.3
C04p61680 Brassica napus HOM05D002385 ORTHO05D002245 9.2e-07 56.6 47 55.3
BolC5t29144H Brassica oleracea HOM05D002385 ORTHO05D002245 9.2e-07 56.6 51 54.9
Gohir.A07G184100 Gossypium hirsutum HOM05D002385 ORTHO05D002245 9.2e-07 56.6 79 51.9
Prupe.6G185500 Prunus persica HOM05D002385 ORTHO05D002245 9.2e-07 56.6 67 50.7
BraA10t42676Z Brassica rapa HOM05D002385 ORTHO05D002245 1.2e-06 56.2 51 54.9
CiPaw.03G113600 Carya illinoinensis HOM05D002385 ORTHO05D002245 1.2e-06 56.2 75 46.7
Oeu027273.1 Olea europaea HOM05D002385 ORTHO05D002245 1.2e-06 56.2 52 57.7
Prupe.6G185200 Prunus persica HOM05D002385 ORTHO05D002245 1.2e-06 56.2 70 48.6
QL04p061416 Quercus lobata HOM05D002385 ORTHO05D002245 1.2e-06 56.2 63 54.0
C05p03670 Brassica napus HOM05D002385 ORTHO05D002245 1.6e-06 55.8 51 54.9
HanXRQChr01g0017681 Helianthus annuus HOM05D002385 ORTHO05D002245 1.6e-06 55.8 51 52.9
Thecc.01G172200 Theobroma cacao HOM05D002385 ORTHO05D002245 1.6e-06 55.8 72 47.2
BcaC02g07945 Brassica carinata HOM05D002385 ORTHO05D002245 2.7e-06 55.1 67 43.3
Glyma.13G003300 Glycine max HOM05D002385 ORTHO05D002245 2.7e-06 55.1 47 61.7
RcHm_v2.0_Chr2g0114521 Rosa chinensis HOM05D002385 ORTHO05D002245 2.7e-06 55.1 73 46.6
Sabra16G0021200 Salix brachista HOM05D002385 ORTHO05D002245 2.7e-06 55.1 72 48.6
Sabra16G0025900 Salix brachista HOM05D002385 ORTHO05D002245 2.7e-06 55.1 72 48.6
THA.LOC104826161 Tarenaya hassleriana HOM05D002385 ORTHO05D002245 2.7e-06 55.1 71 49.3
Rhsim06G0138200 Rhododendron simsii HOM05D002385 ORTHO05D002245 3.5e-06 54.7 82 46.3
Sed0001434 Sechium edule HOM05D002385 ORTHO05D002245 3.5e-06 54.7 68 50.0
CsaV3_4G032300 Cucumis sativus L. HOM05D002385 ORTHO05D002245 4.6e-06 54.3 48 60.4
FAN26G3044 Fragaria x ananassa HOM05D002385 ORTHO05D002245 4.6e-06 54.3 55 54.5
HanXRQChr03g0078081 Helianthus annuus HOM05D002385 ORTHO05D002245 4.6e-06 54.3 73 50.7
AL4G27550 Arabidopsis lyrata HOM05D002385 ORTHO05D002245 6.0e-06 53.9 61 45.9
MELO3C026402.2 Cucumis melo HOM05D002385 ORTHO05D002245 6.0e-06 53.9 50 58.0
vmacro09249 Vaccinium macrocarpon HOM05D002385 ORTHO05D002245 6.0e-06 53.9 76 46.1
Actinidia11006 Actinidia chinensis HOM05D002385 ORTHO05D002245 7.8e-06 53.5 85 50.6
C05p41120 Brassica napus HOM05D002385 ORTHO05D002245 7.8e-06 53.5 67 44.8
BolC5t32855H Brassica oleracea HOM05D002385 ORTHO05D002245 7.8e-06 53.5 50 52.0
ClCG11G016780 Citrullus lanatus HOM05D002385 ORTHO05D002245 7.8e-06 53.5 68 47.1
Migut.M00099 Erythranthe guttata HOM05D002385 ORTHO05D002245 7.8e-06 53.5 66 53.0
Lj6g0002718 Lotus japonicus HOM05D002385 ORTHO05D002245 7.8e-06 53.5 63 49.2
TAR626G0681 Trochodendron aralioides HOM05D002385 ORTHO05D002245 7.8e-06 53.5 80 48.8


User provided reference genes

Program Settings