Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat1g002520 Pisum sativum HOM05D007146 ORTHO05D008971 3.4e-261 904.4 453 100.0
TPR.G9764 Trifolium pratense HOM05D007146 ORTHO05D008971 8.9e-209 730.3 429 85.8
Medtr2g064450 Medicago truncatula HOM05D007146 ORTHO05D008971 7.3e-203 710.7 455 79.6
Glyma.08G173200 Glycine max HOM05D007146 ORTHO05D008971 4.1e-190 668.3 419 79.0
Lj3g0000430 Lotus japonicus HOM05D007146 ORTHO05D008971 1.3e-188 663.3 425 78.6
Phvul.005G055600 Phaseolus vulgaris HOM05D007146 ORTHO05D008971 2.6e-184 649.0 417 76.7
VMungo1080G0158 Vigna mungo HOM05D007146 ORTHO05D008971 1.3e-183 646.7 415 77.1
Lalb_Chr25g0285151 Lupinus albus HOM05D007146 ORTHO05D008971 3.6e-178 628.6 425 75.5
arahy.Tifrunner.gnm1.ann1.L14HV7 Arachis hypogaea HOM05D007146 ORTHO05D008971 1.5e-163 580.1 466 65.0
arahy.Tifrunner.gnm1.ann1.5W7G8A Arachis hypogaea HOM05D007146 ORTHO05D008971 2.8e-162 575.9 466 64.6
CiPaw.11G069000 Carya illinoinensis HOM05D007146 ORTHO05D008971 1.9e-150 536.6 410 66.3
MD05G1215600 Malus domestica HOM05D007146 ORTHO05D008971 9.7e-147 524.2 409 64.5
TWI38G0129 Tripterygium wilfordii HOM05D007146 ORTHO05D008971 9.7e-147 524.2 399 64.7
FAN11G2635 Fragaria x ananassa HOM05D007146 ORTHO05D008971 1.3e-146 523.9 416 63.2
Atru.chr2.1879 Acer truncatum HOM05D007146 ORTHO05D008971 1.6e-146 523.5 411 63.0
FvH4_3g16020 Fragaria vesca HOM05D007146 ORTHO05D008971 1.1e-145 520.8 416 63.0
FAN21G1125 Fragaria x ananassa HOM05D007146 ORTHO05D008971 4.5e-144 515.4 415 62.4
RcHm_v2.0_Chr5g0027001 Rosa chinensis HOM05D007146 ORTHO05D008971 2.9e-143 512.7 442 60.9
Prupe.4G143400 Prunus persica HOM05D007146 ORTHO05D008971 1.9e-142 510.0 410 62.2
COL.COLO4_05069 Corchorus olitorius HOM05D007146 ORTHO05D008971 2.1e-141 506.5 444 59.9
DCAR_009636 Daucus carota HOM05D007146 ORTHO05D008971 1.1e-139 500.7 410 62.2
Potri.007G065300 Populus trichocarpa HOM05D007146 ORTHO05D008971 1.5e-139 500.4 401 62.1
Gorai.004G269700 Gossypium raimondii HOM05D007146 ORTHO05D008971 4.8e-138 495.4 423 60.5
Eucgr.F01450 Eucalyptus grandis HOM05D007146 ORTHO05D008971 1.1e-137 494.2 408 62.0
GSVIVG01020477001 Vitis vinifera HOM05D007146 ORTHO05D008971 1.4e-137 493.8 406 61.6
CSS0033590 Camellia sinensis var. sinensis HOM05D007146 ORTHO05D008971 1.8e-137 493.4 416 59.6
CSS0042492 Camellia sinensis var. sinensis HOM05D007146 ORTHO05D008971 1.8e-137 493.4 416 59.6
Gohir.D08G252900 Gossypium hirsutum HOM05D007146 ORTHO05D008971 1.2e-136 490.7 432 59.0
PGSC0003DMG401022133 Solanum tuberosum HOM05D007146 ORTHO05D008971 1.5e-136 490.3 452 57.3
FAN25G2803 Fragaria x ananassa HOM05D007146 ORTHO05D008971 2.0e-136 490.0 392 62.5
PGR083G2275 Punica granatum HOM05D007146 ORTHO05D008971 2.0e-136 490.0 411 61.8
Sopen07g034520 Solanum pennellii HOM05D007146 ORTHO05D008971 2.9e-135 486.1 416 60.6
Sabra07G0052900 Salix brachista HOM05D007146 ORTHO05D008971 1.4e-134 483.8 430 57.4
Solyc07g066340.3 Solanum lycopersicum HOM05D007146 ORTHO05D008971 1.4e-134 483.8 419 59.7
THA.LOC104812351 Tarenaya hassleriana HOM05D007146 ORTHO05D008971 1.4e-134 483.8 404 60.1
AT1G16650 Arabidopsis thaliana HOM05D007146 ORTHO05D008971 1.9e-134 483.4 400 61.2
CAN.G943.29 Capsicum annuum HOM05D007146 ORTHO05D008971 2.5e-134 483.0 412 59.7
Nn7g37748 Nelumbo nucifera HOM05D007146 ORTHO05D008971 5.5e-134 481.9 416 58.9
Thhalv10007372m.g Eutrema salsugineum HOM05D007146 ORTHO05D008971 7.2e-134 481.5 433 57.7
MBI02_g25677_MAGBIO Magnolia biondii HOM05D007146 ORTHO05D008971 9.4e-134 481.1 416 58.9
BolC5t30209H Brassica oleracea HOM05D007146 ORTHO05D008971 2.7e-133 479.6 430 57.9
AL1G28820 Arabidopsis lyrata HOM05D007146 ORTHO05D008971 6.1e-133 478.4 430 57.0
C05p14940 Brassica napus HOM05D007146 ORTHO05D008971 1.0e-132 477.6 430 57.7
A06p12640 Brassica napus HOM05D007146 ORTHO05D008971 1.8e-132 476.9 430 58.1
Sed0009835 Sechium edule HOM05D007146 ORTHO05D008971 3.3e-131 472.6 392 60.7
Rhsim06G0237700 Rhododendron simsii HOM05D007146 ORTHO05D008971 7.4e-131 471.5 451 56.3
ClCG11G016310 Citrullus lanatus HOM05D007146 ORTHO05D008971 9.7e-131 471.1 411 58.2
BcaC05g25529 Brassica carinata HOM05D007146 ORTHO05D008971 1.3e-130 470.7 437 56.8
vmacro11655 Vaccinium macrocarpon HOM05D007146 ORTHO05D008971 1.4e-129 467.2 459 54.7
Carub.0001s1639 Capsella rubella HOM05D007146 ORTHO05D008971 2.4e-129 466.5 427 56.4
Cc05_g15970 Coffea canephora HOM05D007146 ORTHO05D008971 2.4e-129 466.5 433 55.7
CsaV3_2G022170 Cucumis sativus L. HOM05D007146 ORTHO05D008971 3.1e-129 466.1 402 58.2
Aa31LG7G1140 Aethionema arabicum HOM05D007146 ORTHO05D008971 9.1e-129 464.5 401 58.9
Peaxi162Scf00232g01133 Petunia axillaris HOM05D007146 ORTHO05D008971 3.4e-128 462.6 408 57.6
BraA06t24425Z Brassica rapa HOM05D007146 ORTHO05D008971 1.3e-127 460.7 450 55.1
SalBow8G2846 Salvia bowleyana HOM05D007146 ORTHO05D008971 1.4e-126 457.2 421 53.2
Oeu002808.1 Olea europaea HOM05D007146 ORTHO05D008971 2.1e-125 453.4 459 53.4
Aqoxy4G00043_Aqoxy4G00044 Aquilegia oxysepala HOM05D007146 ORTHO05D008971 2.7e-125 453.0 402 57.7
Manes.03G082700 Manihot esculenta HOM05D007146 ORTHO05D008971 1.4e-124 450.7 435 56.1
PSO675G2245 Papaver somniferum HOM05D007146 ORTHO05D008971 9.7e-123 444.5 455 53.0
PSO541G2405 Papaver somniferum HOM05D007146 ORTHO05D008971 6.3e-122 441.8 413 55.4
Nitab4.5_0000313g0010 Nicotiana tabacum HOM05D007146 ORTHO05D008971 1.8e-121 440.3 377 59.4
SGA_v2.0_scaffold186G40227 Striga asiatica HOM05D007146 ORTHO05D008971 3.1e-121 439.5 420 55.2
HanXRQChr05g0160631 Helianthus annuus HOM05D007146 ORTHO05D008971 7.0e-121 438.3 434 52.1
Nitab4.5_0002933g0010 Nicotiana tabacum HOM05D007146 ORTHO05D008971 7.0e-121 438.3 374 59.4
HPP92_018693 Vanilla planifolia HOM05D007146 ORTHO05D008971 1.0e-119 434.5 403 55.8
ATR1098G072 Amborella trichopoda HOM05D007146 ORTHO05D008971 1.8e-116 423.7 435 52.6
Os12g0610500 Oryza sativa ssp. japonica HOM05D007146 ORTHO05D008971 6.3e-114 415.2 398 53.0
Duzib213G0540 Durio zibethinus HOM05D007146 ORTHO05D008971 1.9e-110 403.7 395 56.7
Gohir.A08G232700 Gossypium hirsutum HOM05D007146 ORTHO05D008971 4.2e-110 402.5 409 52.6
EL10Ac4g08556 Beta vulgaris HOM05D007146 ORTHO05D008971 6.1e-109 398.7 383 53.5
HPP92_018676 Vanilla planifolia HOM05D007146 ORTHO05D008971 1.8e-108 397.1 368 56.8
Lsat_1_v5_gn_9_46800 Lactuca sativa HOM05D007146 ORTHO05D008971 9.8e-107 391.3 417 50.6
MELO3C010557.2 Cucumis melo HOM05D007146 ORTHO05D008971 1.4e-105 387.5 342 57.6
Migut.M01565 Erythranthe guttata HOM05D007146 ORTHO05D008971 1.3e-103 380.9 360 53.3
Ah.06g187050 Amaranthus hybridus HOM05D007146 ORTHO05D008971 1.4e-100 370.9 442 46.6
Zm00001eb135900 Zea mays HOM05D007146 ORTHO05D008971 1.5e-94 350.9 353 51.3
Ca_03693_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 2.8e-93 346.7 201 85.6
Ciclev10021587m.g Citrus clementina HOM05D007146 ORTHO05D008971 3.1e-92 343.2 277 62.5
Thecc.07G156000 Theobroma cacao HOM05D007146 ORTHO05D008971 4.4e-91 339.3 281 60.9
Pp3c1_21800 Physcomitrium patens HOM05D007146 ORTHO05D008971 7.0e-89 332.0 396 45.7
unitig_749.g13702 Utricularia gibba HOM05D007146 ORTHO05D008971 4.6e-88 329.3 425 45.2
Pp3c14_6050 Physcomitrium patens HOM05D007146 ORTHO05D008971 3.9e-87 326.2 399 45.6
Lj8C186T10 Lonicera japonica HOM05D007146 ORTHO05D008971 1.7e-82 310.8 282 59.9
MSTRG.16117 Avicennia marina HOM05D007146 ORTHO05D008971 4.1e-81 306.2 285 54.4
SMO143G0033 Selaginella moellendorffii HOM05D007146 ORTHO05D008971 1.1e-76 291.6 386 42.2
AUR62041925 Chenopodium quinoa HOM05D007146 ORTHO05D008971 3.1e-68 263.5 290 49.0
AagrBONN_evm.TU.Sc2ySwM_368.537 Anthoceros agrestis HOM05D007146 ORTHO05D008971 1.9e-65 254.2 283 48.8
Sp1g14790 Schrenkiella parvula HOM05D007146 ORTHO05D008971 8.4e-58 228.8 212 57.5
TAR627G0841 Trochodendron aralioides HOM05D007146 ORTHO05D008971 7.8e-56 222.2 225 52.0
SEGI_13316 Sequoiadendron giganteum HOM05D007146 ORTHO05D008971 9.9e-51 205.3 240 48.3
CDE03G0452 Ceratophyllum demersum HOM05D007146 ORTHO05D008971 9.6e-46 188.7 341 38.4
CARHR017120 Cardamine hirsuta HOM05D007146 ORTHO05D008971 4.0e-44 183.3 181 55.2
Cpa.g.sc10.30 Carica papaya HOM05D007146 ORTHO05D008971 1.6e-37 161.4 190 49.5
Hund10273 Selenicereus undatus HOM05D007146 ORTHO05D008971 3.4e-35 153.7 124 57.3
Cpa.g.sc10.33 Carica papaya HOM05D007146 ORTHO05D008971 3.0e-31 140.6 96 67.7
CDE03G0405 Ceratophyllum demersum HOM05D007146 ORTHO05D008971 1.8e-28 131.3 118 49.2
Thecc.07G156300 Theobroma cacao HOM05D007146 ORTHO05D008971 2.6e-27 127.5 112 58.0
Hund10306 Selenicereus undatus HOM05D007146 ORTHO05D008971 1.0e-23 115.5 146 50.0
Ciclev10022203m.g Citrus clementina HOM05D007146 ORTHO05D008971 6.1e-16 89.7 62 64.5
Ca_03695_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 3.9e-15 87.0 60 73.3
Ca_03700_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 3.9e-15 87.0 60 73.3
SMO246G0022 Selaginella moellendorffii HOM05D007146 ORTHO05D008971 6.5e-10 69.7 72 52.8
DCAR_002379 Daucus carota HOM05D007146 ORTHO05D008971 3.6e-08 63.9 45 62.2
FAN16G0561 Fragaria x ananassa HOM05D007146 ORTHO05D008971 4.4e-06 57.0 55 47.3


User provided reference genes

Program Settings