Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0ss3186g0240 Pisum sativum HOM05D008288 ORTHO05D010469 1.5e-165 586.3 320 100.0
Medtr3g107650 Medicago truncatula HOM05D008288 ORTHO05D010469 5.4e-144 514.6 319 89.0
TPR.G31773 Trifolium pratense HOM05D008288 ORTHO05D010469 1.3e-142 510.0 319 89.7
Ca_15724_v3 Cicer arietinum L. HOM05D008288 ORTHO05D010469 3.6e-140 501.9 314 88.9
Phvul.009G095100 Phaseolus vulgaris HOM05D008288 ORTHO05D010469 3.2e-112 409.1 310 75.5
VMungo1309G1559 Vigna mungo HOM05D008288 ORTHO05D010469 1.2e-111 407.1 310 75.2
Thecc.09G149300 Theobroma cacao HOM05D008288 ORTHO05D010469 4.5e-98 362.1 302 68.2
Duzib150G0406 Durio zibethinus HOM05D008288 ORTHO05D010469 2.7e-95 352.8 305 66.9
Gorai.009G050100 Gossypium raimondii HOM05D008288 ORTHO05D010469 1.4e-91 340.5 300 65.0
Gohir.A05G047000 Gossypium hirsutum HOM05D008288 ORTHO05D010469 1.8e-91 340.1 300 64.3
Gohir.D05G048766 Gossypium hirsutum HOM05D008288 ORTHO05D010469 1.8e-91 340.1 300 64.7
Actinidia22367 Actinidia chinensis HOM05D008288 ORTHO05D010469 3.1e-91 339.3 305 62.6
Potri.006G251000 Populus trichocarpa HOM05D008288 ORTHO05D010469 5.3e-91 338.6 301 64.5
FAN27G1450 Fragaria x ananassa HOM05D008288 ORTHO05D010469 6.9e-91 338.2 302 63.9
MD15G1120900 Malus domestica HOM05D008288 ORTHO05D010469 1.2e-90 337.4 305 63.3
COL.COLO4_23981 Corchorus olitorius HOM05D008288 ORTHO05D010469 1.5e-90 337.0 305 63.3
FvH4_2g29591 Fragaria vesca HOM05D008288 ORTHO05D010469 5.9e-90 335.1 302 63.6
Lj1g0026401 Lotus japonicus HOM05D008288 ORTHO05D010469 1.7e-89 333.6 243 77.8
FAN15G2470 Fragaria x ananassa HOM05D008288 ORTHO05D010469 2.9e-89 332.8 302 63.2
PGR031G1353 Punica granatum HOM05D008288 ORTHO05D010469 3.8e-89 332.4 298 62.1
RcHm_v2.0_Chr6g0298581 Rosa chinensis HOM05D008288 ORTHO05D010469 8.5e-89 331.3 305 62.0
CSS0049569 Camellia sinensis var. sinensis HOM05D008288 ORTHO05D010469 5.5e-88 328.6 298 64.4
Nitab4.5_0015147g0010 Nicotiana tabacum HOM05D008288 ORTHO05D010469 9.4e-88 327.8 307 61.2
Peaxi162Scf00341g00011 Petunia axillaris HOM05D008288 ORTHO05D010469 1.6e-87 327.0 305 60.7
QL02p022482 Quercus lobata HOM05D008288 ORTHO05D010469 1.6e-87 327.0 305 60.3
Hma1.2p1_0000F.1_g000730 Hydrangea macrophylla HOM05D008288 ORTHO05D010469 7.9e-87 324.7 305 61.6
Ciclev10010324m.g Citrus clementina HOM05D008288 ORTHO05D010469 1.0e-86 324.3 301 62.1
Glyma.04G068600 Glycine max HOM05D008288 ORTHO05D010469 5.1e-86 322.0 252 75.4
MD08G1145200 Malus domestica HOM05D008288 ORTHO05D010469 2.6e-85 319.7 305 60.7
TWI34G1005 Tripterygium wilfordii HOM05D008288 ORTHO05D010469 7.4e-85 318.2 295 63.7
Atru.chr7.2381 Acer truncatum HOM05D008288 ORTHO05D010469 1.3e-84 317.4 305 60.3
Cpa.g.sc91.46 Carica papaya HOM05D008288 ORTHO05D010469 1.7e-84 317.0 288 63.9
Sopen08g021110 Solanum pennellii HOM05D008288 ORTHO05D010469 6.3e-84 315.1 302 59.3
CsaV3_3G046560 Cucumis sativus L. HOM05D008288 ORTHO05D010469 8.2e-84 314.7 295 61.0
Aqoxy7G02071 Aquilegia oxysepala HOM05D008288 ORTHO05D010469 4.1e-83 312.4 302 59.3
Sed0020459 Sechium edule HOM05D008288 ORTHO05D010469 6.9e-83 311.6 317 57.4
ClCG05G017080 Citrullus lanatus HOM05D008288 ORTHO05D010469 1.5e-82 310.5 317 57.7
Solyc08g067170.3 Solanum lycopersicum HOM05D008288 ORTHO05D010469 2.6e-82 309.7 302 58.6
Nitab4.5_0000151g0060 Nicotiana tabacum HOM05D008288 ORTHO05D010469 1.7e-81 307.0 281 62.3
TAR625G1133 Trochodendron aralioides HOM05D008288 ORTHO05D010469 2.9e-81 306.2 295 60.7
CAN.G348.1 Capsicum annuum HOM05D008288 ORTHO05D010469 7.2e-80 301.6 306 57.2
DCAR_007695 Daucus carota HOM05D008288 ORTHO05D010469 7.2e-80 301.6 277 61.7
MBI04_g10412_MAGBIO Magnolia biondii HOM05D008288 ORTHO05D010469 1.2e-79 300.8 299 56.9
Eucgr.C01784 Eucalyptus grandis HOM05D008288 ORTHO05D010469 4.8e-76 288.9 295 59.0
SalBow4G3001 Salvia bowleyana HOM05D008288 ORTHO05D010469 8.2e-76 288.1 301 54.2
Prupe.1G473500 Prunus persica HOM05D008288 ORTHO05D010469 4.1e-75 285.8 306 56.2
Migut.A00319 Erythranthe guttata HOM05D008288 ORTHO05D010469 5.3e-75 285.4 304 56.2
PSO455G0067 Papaver somniferum HOM05D008288 ORTHO05D010469 8.8e-70 268.1 316 51.9
Haze_21560 Corylus avellana HOM05D008288 ORTHO05D010469 3.7e-68 262.7 305 53.8
Manes.16G119800 Manihot esculenta HOM05D008288 ORTHO05D010469 2.7e-66 256.5 299 52.2
PSO170G5425 Papaver somniferum HOM05D008288 ORTHO05D010469 2.9e-65 253.1 316 50.9
Dinv11620 Davidia involucrata HOM05D008288 ORTHO05D010469 2.7e-63 246.5 216 63.4
MELO3C003683.2 Cucumis melo HOM05D008288 ORTHO05D010469 1.8e-62 243.8 317 48.6
Cfa013175 Carpinus fangiana HOM05D008288 ORTHO05D010469 8.8e-54 214.9 223 59.2
Dinv30173 Davidia involucrata HOM05D008288 ORTHO05D010469 2.0e-53 213.8 304 46.4
Lsat_1_v5_gn_1_45101 Lactuca sativa HOM05D008288 ORTHO05D010469 6.6e-49 198.7 213 56.3
CANSAT54G0155 Cannabis sativa HOM05D008288 ORTHO05D010469 2.1e-47 193.7 191 55.0
ATR0815G056 Amborella trichopoda HOM05D008288 ORTHO05D010469 5.2e-30 136.0 280 35.7
SEGI_16453 Sequoiadendron giganteum HOM05D008288 ORTHO05D010469 5.1e-17 92.8 280 29.6
Solyc08g069220.2 Solanum lycopersicum HOM05D008288 ORTHO05D010469 4.3e-16 89.7 278 28.8
Sopen08g022840 Solanum pennellii HOM05D008288 ORTHO05D010469 2.9e-12 77.0 73 57.5
vmacro10024 Vaccinium macrocarpon HOM05D000215 ORTHO05D008904 9.3e-11 72.0 288 27.8
ClCG11G006020 Citrullus lanatus HOM05D000215 ORTHO05D008904 3.5e-10 70.1 286 24.1
Migut.L00465 Erythranthe guttata HOM05D001865 ORTHO05D001815 3.5e-10 70.1 325 24.9
MELO3C008310.2 Cucumis melo HOM05D000215 ORTHO05D008904 4.6e-10 69.7 285 24.2
CsaV3_6G001940 Cucumis sativus L. HOM05D000215 ORTHO05D008904 6.0e-10 69.3 276 25.0
FAN26G2438 Fragaria x ananassa HOM05D001865 ORTHO05D001815 3.3e-08 63.5 300 23.7
FvH4_1g29130 Fragaria vesca HOM05D001865 ORTHO05D001815 4.3e-08 63.2 322 22.7
FAN19G0114 Fragaria x ananassa HOM05D001865 ORTHO05D001815 4.3e-08 63.2 322 22.7
FAN23G2654 Fragaria x ananassa HOM05D001865 ORTHO05D001815 4.3e-08 63.2 323 23.2
FAN28G1515 Fragaria x ananassa HOM05D001865 ORTHO05D001815 1.6e-07 61.2 320 23.4
Haze_06635 Corylus avellana HOM05D000215 ORTHO05D007108 2.8e-07 60.5 272 25.0
Haze_06646 Corylus avellana HOM05D000215 ORTHO05D007108 4.8e-07 59.7 272 25.0
Potri.004G028800 Populus trichocarpa HOM05D000215 ORTHO05D007108 4.8e-07 59.7 291 24.4
Cfa000298 Carpinus fangiana HOM05D000215 ORTHO05D007108 1.4e-06 58.2 272 25.0
Lsat_1_v5_gn_2_123761 Lactuca sativa HOM05D000215 ORTHO05D008904 1.8e-06 57.8 279 25.8
AUR62012277 Chenopodium quinoa HOM05D000215 ORTHO05D008904 3.1e-06 57.0 269 24.9
Duzib235G1018 Durio zibethinus HOM05D000215 ORTHO05D007108 4.0e-06 56.6 262 26.7
Lalb_Chr10g0105221 Lupinus albus HOM05D000215 ORTHO05D008904 4.0e-06 56.6 280 24.3
PSO210G4266 Papaver somniferum HOM05D000215 ORTHO05D007108 4.0e-06 56.6 247 25.9
Sabra04G0016200 Salix brachista HOM05D000215 ORTHO05D007108 4.0e-06 56.6 272 25.4
PSO832G3300 Papaver somniferum HOM05D000215 ORTHO05D007108 5.3e-06 56.2 247 26.3
MBI02_g37288_MAGBIO Magnolia biondii HOM05D000215 ORTHO05D007108 6.9e-06 55.8 232 26.7
CARHR227940 Cardamine hirsuta HOM05D000215 ORTHO05D007108 9.0e-06 55.5 254 27.2


User provided reference genes

Program Settings