Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s929g0160 Pisum sativum HOM05D007439 ORTHO05D009294 5.5e-141 505.8 700 100.0
Ca_04050_v3 Cicer arietinum L. HOM05D007439 ORTHO05D009294 1.7e-89 334.7 686 89.9
Medtr7g405940 Medicago truncatula HOM05D007439 ORTHO05D009294 2.4e-88 330.9 655 93.1
Medtr7g007400 Medicago truncatula HOM05D007439 ORTHO05D009294 8.3e-81 305.8 637 93.4
Lj3g0009249 Lotus japonicus HOM05D007439 ORTHO05D009294 8.9e-75 285.8 701 85.4
Lalb_Chr01g0021581 Lupinus albus HOM05D007439 ORTHO05D009294 3.9e-70 270.4 714 83.3
Glyma.09G242500 Glycine max HOM05D007439 ORTHO05D009294 6.6e-70 269.6 703 83.4
Phvul.008G046300 Phaseolus vulgaris HOM05D007439 ORTHO05D009294 9.0e-67 259.2 696 83.0
arahy.Tifrunner.gnm1.ann1.FQ7S35 Arachis hypogaea HOM05D002637 ORTHO05D008095 4.3e-61 240.4 671 85.5
VMungo1383G3026 Vigna mungo HOM05D007439 ORTHO05D009294 1.3e-60 238.8 670 84.6
CiPaw.09G077400 Carya illinoinensis HOM05D007439 ORTHO05D009294 6.0e-55 219.9 647 85.6
Manes.15G044700 Manihot esculenta HOM05D007439 ORTHO05D009294 1.8e-54 218.4 707 80.2
Prupe.4G111800 Prunus persica HOM05D007439 ORTHO05D009294 4.8e-52 210.3 645 80.2
MELO3C021752.2 Cucumis melo HOM05D007439 ORTHO05D009294 5.3e-51 206.8 695 76.4
MD05G1251800 Malus domestica HOM05D007439 ORTHO05D009294 6.9e-51 206.5 647 84.2
Cfa000712 Carpinus fangiana HOM05D007439 ORTHO05D009294 1.2e-50 205.7 647 84.9
TWI38G1636 Tripterygium wilfordii HOM05D007439 ORTHO05D009294 1.3e-49 202.2 654 84.4
Ciclev10014445m.g Citrus clementina HOM05D007439 ORTHO05D009294 1.7e-49 201.8 705 76.9
Sed0017437 Sechium edule HOM05D007439 ORTHO05D009294 1.7e-49 201.8 687 75.1
CANSAT80G1475 Cannabis sativa HOM05D007439 ORTHO05D009294 6.4e-49 199.9 673 78.9
Gorai.009G151900 Gossypium raimondii HOM05D007439 ORTHO05D009294 2.4e-48 198.0 689 77.5
Gohir.D05G147800 Gossypium hirsutum HOM05D007439 ORTHO05D009294 3.2e-48 197.6 689 77.4
Eucgr.E01800 Eucalyptus grandis HOM05D007439 ORTHO05D009294 7.1e-48 196.4 141 66.0
Duzib235G1301 Durio zibethinus HOM05D007439 ORTHO05D009294 2.1e-47 194.9 689 76.8
Thecc.06G142600 Theobroma cacao HOM05D007439 ORTHO05D009294 2.7e-47 194.5 689 80.4
Thecc.06G142800 Theobroma cacao HOM05D007439 ORTHO05D009294 2.7e-47 194.5 689 80.4
Sabra15G0138100 Salix brachista HOM05D007439 ORTHO05D009294 6.0e-47 193.4 655 83.8
CANSAT80G1820 Cannabis sativa HOM05D007439 ORTHO05D009294 1.8e-46 191.8 695 76.8
Eucgr.E01795 Eucalyptus grandis HOM05D007439 ORTHO05D009294 2.3e-46 191.4 639 76.1
ClCG01G009470 Citrullus lanatus HOM05D007439 ORTHO05D009294 3.0e-46 191.0 698 79.5
CsaV3_1G046310 Cucumis sativus L. HOM05D007439 ORTHO05D009294 3.0e-46 191.0 697 74.2
Gohir.A05G145400 Gossypium hirsutum HOM05D007439 ORTHO05D009294 3.9e-46 190.7 692 69.8
PGR042G2360 Punica granatum HOM05D007439 ORTHO05D009294 1.5e-45 188.7 691 70.5
Ah.11g038960 Amaranthus hybridus HOM05D007439 ORTHO05D009294 1.9e-45 188.3 651 73.7
QL11p016354 Quercus lobata HOM05D002343 ORTHO05D004258 3.3e-45 187.6 648 83.5
Cpa.g.sc135.9 Carica papaya HOM05D007439 ORTHO05D009294 5.6e-45 186.8 675 80.9
FAN25G2844 Fragaria x ananassa HOM05D002343 ORTHO05D004258 7.4e-45 186.4 151 58.9
Thecc.06G142300 Theobroma cacao HOM05D007439 ORTHO05D009294 7.4e-45 186.4 689 80.4
Potri.015G121700 Populus trichocarpa HOM05D007439 ORTHO05D009294 3.7e-44 184.1 655 83.4
Actinidia22395 Actinidia chinensis HOM05D007439 ORTHO05D009294 1.8e-43 181.8 647 83.5
AUR62035769 Chenopodium quinoa HOM05D007439 ORTHO05D009294 3.1e-43 181.0 195 52.3
Haze_06039 Corylus avellana HOM05D007439 ORTHO05D009294 4.0e-43 180.6 135 67.4
FvH4_3g12270 Fragaria vesca HOM05D007439 ORTHO05D009294 2.6e-42 177.9 702 78.3
PGSC0003DMG400010332 Solanum tuberosum HOM05D007439 ORTHO05D009294 3.4e-42 177.6 649 83.4
THA.LOC104811547 Tarenaya hassleriana HOM05D007439 ORTHO05D009294 1.0e-41 176.0 167 57.5
Sopen02g017990 Solanum pennellii HOM05D007439 ORTHO05D009294 2.2e-41 174.9 649 82.6
EL10Ac1g02315 Beta vulgaris HOM05D007439 ORTHO05D009294 6.5e-41 173.3 142 61.3
FAN16G2455 Fragaria x ananassa HOM05D002343 ORTHO05D004258 6.5e-41 173.3 190 51.6
Sp7g18380 Schrenkiella parvula HOM05D004848 ORTHO05D006859 6.5e-41 173.3 147 58.5
SGA_v2.0_scaffold298G47685 Striga asiatica HOM05D007439 ORTHO05D009294 6.5e-41 173.3 658 65.5
Solyc02g068890.3 Solanum lycopersicum HOM05D007439 ORTHO05D009294 8.4e-41 172.9 649 82.4
Rhsim08G0175300 Rhododendron simsii HOM05D007439 ORTHO05D009294 2.5e-40 171.4 140 63.6
DCAR_003780 Daucus carota HOM05D007439 ORTHO05D009294 4.2e-40 170.6 148 60.8
A01p11750 Brassica napus HOM05D007439 ORTHO05D009294 5.5e-40 170.2 136 61.8
BraA01t01117Z Brassica rapa HOM05D007439 ORTHO05D009294 5.5e-40 170.2 136 61.8
Atru.chr10.530 Acer truncatum HOM05D007439 ORTHO05D009294 7.1e-40 169.9 649 82.6
Dinv02254 Davidia involucrata HOM05D007439 ORTHO05D009294 1.6e-39 168.7 659 82.4
RcHm_v2.0_Chr5g0020081 Rosa chinensis HOM05D007439 ORTHO05D009294 1.6e-39 168.7 647 82.4
AT4G19890 Arabidopsis thaliana HOM05D007439 ORTHO05D009294 2.7e-39 167.9 172 54.1
C01p13940 Brassica napus HOM05D007439 ORTHO05D009294 2.7e-39 167.9 135 61.5
BolC1t01361H Brassica oleracea HOM05D007439 ORTHO05D009294 2.7e-39 167.9 135 61.5
BcaC09g51360 Brassica carinata HOM05D007439 ORTHO05D009294 3.5e-39 167.5 135 61.5
CAN.G149.50 Capsicum annuum HOM05D007439 ORTHO05D009294 4.6e-39 167.2 658 81.3
BcaNung01745 Brassica carinata HOM05D007439 ORTHO05D009294 6.0e-39 166.8 140 59.3
Nitab4.5_0001288g0070 Nicotiana tabacum HOM05D002343 ORTHO05D004258 1.8e-38 165.2 168 54.8
Lj2C350T3 Lonicera japonica HOM05D007439 ORTHO05D009294 8.7e-38 162.9 140 60.0
Aqoxy7G03766 Aquilegia oxysepala HOM05D007439 ORTHO05D009294 1.9e-37 161.8 661 68.4
Aa31LG6G2350 Aethionema arabicum HOM05D004848 ORTHO05D006859 2.5e-37 161.4 174 51.1
AL7G34150 Arabidopsis lyrata HOM05D004848 ORTHO05D009294 9.7e-37 159.5 153 56.9
Sc02g0008330 Simmondsia chinensis HOM05D007439 ORTHO05D009294 3.7e-36 157.5 181 48.1
FAN21G0604 Fragaria x ananassa HOM05D002343 ORTHO05D004258 4.8e-36 157.1 125 60.8
AUR62034958 Chenopodium quinoa HOM05D007439 ORTHO05D009294 6.3e-36 156.8 121 67.8
HanXRQChr14g0447351 Helianthus annuus HOM05D007439 ORTHO05D009294 8.2e-36 156.4 648 80.4
CSS0002129 Camellia sinensis var. sinensis HOM05D007439 ORTHO05D009294 1.1e-35 156.0 165 55.8
TAR633G0007 Trochodendron aralioides HOM05D007439 ORTHO05D009294 3.1e-35 154.5 141 61.0
Migut.F01393 Erythranthe guttata HOM05D007439 ORTHO05D009294 3.4e-34 151.0 148 54.1
Lsat_1_v5_gn_2_63940 Lactuca sativa HOM05D007439 ORTHO05D009294 3.4e-34 151.0 117 65.0
Peaxi162Scf00149g00061 Petunia axillaris HOM05D007439 ORTHO05D009294 3.4e-34 151.0 126 60.3
Thhalv10027430m.g Eutrema salsugineum HOM05D007439 ORTHO05D009294 1.7e-33 148.7 124 60.5
Carub.0007s2132 Capsella rubella HOM05D007439 ORTHO05D009294 3.8e-33 147.5 124 60.5
Haze_06038 Corylus avellana HOM05D007439 ORTHO05D009294 5.0e-33 147.1 153 56.2
CARHR226670 Cardamine hirsuta HOM05D007439 ORTHO05D009294 3.2e-32 144.4 119 61.3
SHI24856 Sapria himalayana HOM05D007439 ORTHO05D009294 3.2e-32 144.4 145 52.4
MSTRG.16346 Avicennia marina HOM05D007439 ORTHO05D009294 9.3e-32 142.9 665 78.3
Eucgr.E01847 Eucalyptus grandis HOM05D007439 ORTHO05D009294 1.0e-30 139.4 95 69.5
SalBow6G0510 Salvia bowleyana HOM05D007439 ORTHO05D009294 3.9e-30 137.5 137 54.0
Oeu060350.1 Olea europaea HOM05D007439 ORTHO05D009294 5.1e-30 137.1 650 80.3
Eucgr.E01833 Eucalyptus grandis HOM05D007439 ORTHO05D009294 8.8e-30 136.3 94 71.3
ECA238G3489 Erigeron canadensis HOM05D000031 ORTHO05D000030 1.9e-29 135.2 113 63.7
Cc09_g06120 Coffea canephora HOM05D007439 ORTHO05D009294 5.7e-29 133.7 652 74.5
ATR0049G016 Amborella trichopoda HOM05D007439 ORTHO05D009294 2.2e-28 131.7 150 48.0
Nitab4.5_0000029g0150 Nicotiana tabacum HOM05D007439 ORTHO05D009294 6.3e-28 130.2 166 47.0
Eucgr.E01870 Eucalyptus grandis HOM05D007439 ORTHO05D009294 8.2e-28 129.8 95 65.3
PSO210G5823 Papaver somniferum HOM05D007439 ORTHO05D009294 5.3e-27 127.1 686 60.9
PSO210G3018 Papaver somniferum HOM05D007439 ORTHO05D009294 2.6e-26 124.8 126 51.6
HPP92_005782 Vanilla planifolia HOM05D007439 ORTHO05D009294 3.8e-25 120.9 151 48.3
QL11p017775 Quercus lobata HOM05D000038 ORTHO05D000143 1.4e-24 119.0 90 65.6
HPP92_005808 Vanilla planifolia HOM05D007439 ORTHO05D009294 3.2e-24 117.9 201 41.8
MBI03_g16306_MAGBIO Magnolia biondii HOM05D007439 ORTHO05D009294 1.2e-23 115.9 142 47.9
COL.COLO4_30991 Corchorus olitorius HOM05D007439 ORTHO05D009294 1.6e-23 115.5 77 74.0
RcHm_v2.0_Chr7g0211421 Rosa chinensis HOM05D007439 ORTHO05D009294 5.1e-22 110.5 108 51.9
Nitab4.5_0013428g0020 Nicotiana tabacum HOM05D007439 ORTHO05D009294 4.1e-19 100.9 78 66.7
Haze_06045 Corylus avellana HOM05D001622 ORTHO05D009294 5.9e-18 97.1 65 72.3
CDE06G0761 Ceratophyllum demersum HOM05D000063 ORTHO05D002147 1.7e-17 95.5 139 42.4
MD10G1232900 Malus domestica HOM05D007439 ORTHO05D009294 3.8e-17 94.4 68 69.1
BcaB06g28505 Brassica carinata HOM05D007439 ORTHO05D009294 9.4e-16 89.7 92 56.5
BolC4t27551H Brassica oleracea HOM05D007439 ORTHO05D009294 9.4e-16 89.7 92 56.5
Eucgr.E01791 Eucalyptus grandis HOM05D007439 ORTHO05D009294 3.6e-15 87.8 61 70.5
Os11g0607100 Oryza sativa ssp. japonica HOM05D007439 ORTHO05D009294 2.0e-13 82.0 117 38.5
SEGI_11644 Sequoiadendron giganteum HOM05D007439 ORTHO05D009294 2.8e-12 78.2 139 31.7
SEGI_34940 Sequoiadendron giganteum HOM05D007439 ORTHO05D009294 2.8e-12 78.2 139 31.7
Eucgr.E01806 Eucalyptus grandis HOM05D007439 ORTHO05D009294 1.1e-11 76.3 50 76.0
Zm00001eb167160 Zea mays HOM05D007439 ORTHO05D009294 1.1e-11 76.3 108 36.1
C04p60520 Brassica napus HOM05D007439 ORTHO05D009294 7.0e-11 73.6 69 60.9


User provided reference genes

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