Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s629g0200 Pisum sativum HOM05D006903 ORTHO05D008655 9.4e-184 646.7 330 100.0
TPR.G22411 Trifolium pratense HOM05D006903 ORTHO05D008655 2.9e-161 572.0 328 88.4
Ca_26576_v3 Cicer arietinum L. HOM05D006903 ORTHO05D008655 3.8e-161 571.6 330 89.1
Medtr5g053280 Medicago truncatula HOM05D006903 ORTHO05D008655 8.9e-158 560.5 328 86.9
Lj2g0014822 Lotus japonicus HOM05D006903 ORTHO05D008655 3.4e-149 531.9 330 82.1
Phvul.003G026200 Phaseolus vulgaris HOM05D006903 ORTHO05D008655 1.6e-146 523.1 330 80.3
Glyma.02G101000 Glycine max HOM05D006903 ORTHO05D008655 5.0e-145 518.1 330 80.3
VMungo1215G2648 Vigna mungo HOM05D006903 ORTHO05D008655 3.3e-144 515.4 330 80.0
arahy.Tifrunner.gnm1.ann1.9PC4TR Arachis hypogaea HOM05D006903 ORTHO05D008655 4.9e-140 501.5 330 77.6
arahy.Tifrunner.gnm1.ann1.RDH5GK Arachis hypogaea HOM05D006903 ORTHO05D008655 2.1e-138 496.1 330 76.7
Lalb_Chr04g0254991 Lupinus albus HOM05D006903 ORTHO05D008655 6.0e-138 494.6 330 77.9
Haze_17427 Corylus avellana HOM05D006903 ORTHO05D008655 1.3e-124 450.3 329 69.9
Haze_17428 Corylus avellana HOM05D006903 ORTHO05D008655 1.3e-124 450.3 329 69.9
MD13G1047700 Malus domestica HOM05D006903 ORTHO05D008655 5.1e-121 438.3 329 67.8
QL01p001027 Quercus lobata HOM05D006903 ORTHO05D008655 6.2e-119 431.4 329 66.6
Atru.chr11.1372 Acer truncatum HOM05D006903 ORTHO05D008655 8.1e-119 431.0 329 66.3
Prupe.1G304300 Prunus persica HOM05D006903 ORTHO05D008655 4.0e-118 428.7 331 66.8
CSS0045037 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 1.5e-117 426.8 329 65.7
GSVIVG01011964001 Vitis vinifera HOM05D006903 ORTHO05D008655 2.6e-117 426.0 329 66.3
Dinv16514 Davidia involucrata HOM05D006903 ORTHO05D008655 5.8e-117 424.9 329 64.1
Manes.06G073100 Manihot esculenta HOM05D006903 ORTHO05D008655 9.9e-117 424.1 328 66.2
Duzib248G0677 Durio zibethinus HOM05D006903 ORTHO05D008655 2.2e-116 422.9 329 66.6
RcHm_v2.0_Chr4g0435961 Rosa chinensis HOM05D006903 ORTHO05D008655 2.2e-116 422.9 330 65.2
Rhsim09G0113100 Rhododendron simsii HOM05D006903 ORTHO05D008655 3.8e-116 422.2 329 64.4
Sabra10G0099600 Salix brachista HOM05D006903 ORTHO05D008655 8.4e-116 421.0 328 66.5
Actinidia14845 Actinidia chinensis HOM05D006903 ORTHO05D008655 2.4e-115 419.5 330 64.8
Cpa.g.sc1.226 Carica papaya HOM05D006903 ORTHO05D008655 9.3e-115 417.5 326 66.0
Sed0022387 Sechium edule HOM05D006903 ORTHO05D008655 9.3e-115 417.5 330 65.2
CiPaw.16G002500 Carya illinoinensis HOM05D006903 ORTHO05D008655 1.6e-114 416.8 314 69.1
FAN22G1870 Fragaria x ananassa HOM05D006903 ORTHO05D008655 2.7e-114 416.0 330 64.2
FAN12G3275 Fragaria x ananassa HOM05D006903 ORTHO05D008655 4.6e-114 415.2 330 64.2
Hund05771 Selenicereus undatus HOM05D006903 ORTHO05D008655 1.7e-113 413.3 329 61.7
FvH4_4g28200 Fragaria vesca HOM05D006903 ORTHO05D008655 2.3e-113 412.9 330 63.9
Potri.010G130700 Populus trichocarpa HOM05D006903 ORTHO05D008655 2.3e-113 412.9 328 65.2
PGR119G0052 Punica granatum HOM05D006903 ORTHO05D008655 4.3e-112 408.7 329 62.3
Peaxi162Scf00367g00739 Petunia axillaris HOM05D006903 ORTHO05D008655 2.8e-111 406.0 329 63.5
CsaV3_5G033920 Cucumis sativus L. HOM05D006903 ORTHO05D008655 1.8e-110 403.3 328 62.2
CANSAT64G1629 Cannabis sativa HOM05D006903 ORTHO05D008655 2.4e-110 402.9 329 63.2
Lj3C1020T9 Lonicera japonica HOM05D006903 ORTHO05D008655 2.4e-110 402.9 329 64.1
SGA_v2.0_scaffold14G06815 Striga asiatica HOM05D006903 ORTHO05D008655 4.0e-110 402.1 331 61.3
Migut.E00291 Erythranthe guttata HOM05D006903 ORTHO05D008655 6.9e-110 401.4 330 60.6
Sc04g0006770 Simmondsia chinensis HOM05D006903 ORTHO05D008655 9.0e-110 401.0 329 59.6
Oeu044621.1 Olea europaea HOM05D006903 ORTHO05D008655 2.0e-109 399.8 329 62.9
Nitab4.5_0005803g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 4.5e-109 398.7 329 62.9
Thhalv10007585m.g Eutrema salsugineum HOM05D006903 ORTHO05D008655 1.7e-108 396.7 330 60.9
Gorai.005G137600 Gossypium raimondii HOM05D006903 ORTHO05D008655 2.9e-108 396.0 329 62.9
EL10Ac6g14516 Beta vulgaris HOM05D006903 ORTHO05D008655 8.4e-108 394.4 329 59.6
DCAR_030091 Daucus carota HOM05D006903 ORTHO05D008655 8.4e-108 394.4 329 62.3
FAN17G3035 Fragaria x ananassa HOM05D006903 ORTHO05D008655 1.1e-107 394.0 330 62.4
Eucgr.G02357 Eucalyptus grandis HOM05D006903 ORTHO05D008655 3.2e-107 392.5 328 60.7
AUR62002930 Chenopodium quinoa HOM05D006903 ORTHO05D008655 4.2e-107 392.1 329 60.5
AT1G26090 Arabidopsis thaliana HOM05D006903 ORTHO05D008655 9.3e-107 391.0 329 60.2
CAN.G184.79 Capsicum annuum HOM05D006903 ORTHO05D008655 1.6e-106 390.2 329 62.0
Sp1g22600 Schrenkiella parvula HOM05D006903 ORTHO05D008655 4.6e-106 388.7 330 60.3
Carub.0001s2488 Capsella rubella HOM05D006903 ORTHO05D008655 1.0e-105 387.5 329 59.3
Sopen05g005730 Solanum pennellii HOM05D006903 ORTHO05D008655 1.0e-105 387.5 330 61.5
AL1G39690 Arabidopsis lyrata HOM05D006903 ORTHO05D008655 1.3e-105 387.1 329 59.9
BraA08t34657Z Brassica rapa HOM05D006903 ORTHO05D008655 1.8e-105 386.7 329 60.8
ECA246G0069 Erigeron canadensis HOM05D006903 ORTHO05D008655 1.8e-105 386.7 329 60.8
PGSC0003DMG400000822 Solanum tuberosum HOM05D006903 ORTHO05D008655 1.8e-105 386.7 329 60.8
Aqoxy3G00382 Aquilegia oxysepala HOM05D006903 ORTHO05D008655 2.3e-105 386.3 331 60.7
A08p27120 Brassica napus HOM05D006903 ORTHO05D008655 5.1e-105 385.2 329 60.2
C03p72740 Brassica napus HOM05D006903 ORTHO05D008655 2.5e-104 382.9 329 60.2
BolC3t19572H Brassica oleracea HOM05D006903 ORTHO05D008655 2.5e-104 382.9 329 60.2
Aa31LG7G8910 Aethionema arabicum HOM05D006903 ORTHO05D008655 5.6e-104 381.7 329 61.7
SalBow8G1412 Salvia bowleyana HOM05D006903 ORTHO05D008655 5.6e-104 381.7 328 59.5
Thecc.02G362300 Theobroma cacao HOM05D006903 ORTHO05D008655 1.3e-103 380.6 293 66.6
Cfa018642 Carpinus fangiana HOM05D006903 ORTHO05D008655 6.2e-103 378.3 329 62.0
CARHR025840 Cardamine hirsuta HOM05D006903 ORTHO05D008655 2.4e-102 376.3 329 59.3
FAN07G2589 Fragaria x ananassa HOM05D006903 ORTHO05D008655 2.4e-102 376.3 330 60.6
unitig_62.g23710 Utricularia gibba HOM05D006903 ORTHO05D008655 5.3e-102 375.2 333 59.5
Nn3g17696 Nelumbo nucifera HOM05D006903 ORTHO05D008655 2.0e-101 373.2 333 58.3
Cc11_g10700 Coffea canephora HOM05D006903 ORTHO05D008655 5.8e-101 371.7 329 58.4
COL.COLO4_07859 Corchorus olitorius HOM05D006903 ORTHO05D008655 5.8e-101 371.7 329 60.2
MELO3C012210.2 Cucumis melo HOM05D006903 ORTHO05D008655 7.6e-101 371.3 348 57.8
Lsat_1_v5_gn_3_58300 Lactuca sativa HOM05D006903 ORTHO05D008655 1.3e-100 370.5 330 57.6
ClCG05G023070 Citrullus lanatus HOM05D006903 ORTHO05D008655 2.2e-100 369.8 368 54.6
HanXRQChr15g0476011 Helianthus annuus HOM05D006903 ORTHO05D008655 1.1e-99 367.5 330 57.0
Hma1.2p1_0406F.1_g145980 Hydrangea macrophylla HOM05D006903 ORTHO05D008655 9.3e-99 364.4 293 65.2
PSO478G5279 Papaver somniferum HOM05D006903 ORTHO05D008655 1.2e-98 364.0 332 56.0
MBI10_g08549_MAGBIO Magnolia biondii HOM05D006903 ORTHO05D008655 3.5e-98 362.5 331 57.7
PSO017G3486 Papaver somniferum HOM05D006903 ORTHO05D008655 7.9e-98 361.3 331 55.9
Nitab4.5_0004705g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 3.0e-97 359.4 329 58.7
BcaB03g12083 Brassica carinata HOM05D006903 ORTHO05D008655 1.6e-95 353.6 331 57.1
TWI31G1007 Tripterygium wilfordii HOM05D006903 ORTHO05D008655 8.4e-92 341.3 289 59.9
Ciclev10033640m.g Citrus clementina HOM05D006903 ORTHO05D008655 1.1e-91 340.9 303 59.7
TAR629G3475 Trochodendron aralioides HOM05D006903 ORTHO05D008655 2.5e-91 339.7 293 59.7
ATR0053G028 Amborella trichopoda HOM05D006903 ORTHO05D008655 4.6e-90 335.5 330 55.5
Zm00001eb252440 Zea mays HOM05D006903 ORTHO05D008655 7.4e-88 328.2 328 53.7
AUR62007740 Chenopodium quinoa HOM05D006903 ORTHO05D008655 4.6e-82 308.9 303 53.8
vmacro10523 Vaccinium macrocarpon HOM05D006903 ORTHO05D008655 1.2e-74 284.3 328 48.8
Ah.03g137980 Amaranthus hybridus HOM05D006903 ORTHO05D008655 3.6e-74 282.7 325 47.4
AagrBONN_evm.TU.Sc2ySwM_117.1113 Anthoceros agrestis HOM05D006903 ORTHO05D008655 2.0e-72 276.9 331 46.8
Pp3c6_9390 Physcomitrium patens HOM05D006903 ORTHO05D008655 1.2e-66 257.7 332 43.4
SEGI_13133 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 5.2e-65 252.3 288 47.9
SEGI_18137 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 5.2e-65 252.3 288 47.9
Mapoly0088s0003 Marchantia polymorpha HOM05D006903 ORTHO05D008655 2.6e-64 250.0 332 41.6
Gohir.D02G116200 Gossypium hirsutum HOM05D006903 ORTHO05D008655 1.2e-61 241.1 189 65.1
Gohir.A03G097100 Gossypium hirsutum HOM05D006903 ORTHO05D008655 2.6e-61 240.0 189 65.1
Glyma.01G089202 Glycine max HOM05D006903 ORTHO05D008655 3.4e-56 223.0 146 71.9
SMO367G1048 Selaginella moellendorffii HOM05D006903 ORTHO05D008655 5.9e-53 212.2 334 36.2
Solyc05g009920.4 Solanum lycopersicum HOM05D006903 ORTHO05D008655 3.4e-48 196.4 154 65.6
HPP92_003073 Vanilla planifolia HOM05D006903 ORTHO05D008655 9.5e-43 178.3 165 56.4
HanXRQChr00c0584g0576181 Helianthus annuus HOM05D006903 ORTHO05D008655 2.3e-41 173.7 154 57.1
Potri.008G115401 Populus trichocarpa HOM05D006903 ORTHO05D008655 2.6e-40 170.2 154 56.5
CSS0042654 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 2.4e-38 163.7 146 58.2
HPP92_003072 Vanilla planifolia HOM05D006903 ORTHO05D008655 2.4e-30 137.1 124 51.6
GSVIVG01021677001 Vitis vinifera HOM05D006903 ORTHO05D008655 1.1e-25 121.7 96 62.5
CSS0002023 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 7.5e-24 115.5 122 54.1
HanXRQChr00c0584g0576191 Helianthus annuus HOM05D006903 ORTHO05D008655 4.9e-23 112.8 111 52.3
Os02g0711200 Oryza sativa ssp. japonica HOM05D006903 ORTHO05D008655 3.6e-18 96.7 92 48.9
TAR626G1973 Trochodendron aralioides HOM05D006903 ORTHO05D008655 1.1e-17 95.1 90 53.3
GSVIVG01021676001 Vitis vinifera HOM05D006903 ORTHO05D008655 4.9e-15 86.3 54 75.9


User provided reference genes

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