Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s5561g0040 Pisum sativum HOM05D006006 ORTHO05D007566 5.0e-204 714.1 344 100.0
Medtr1g029000 Medicago truncatula HOM05D006006 ORTHO05D007566 4.7e-170 601.3 343 83.1
TPR.G33300 Trifolium pratense HOM05D006006 ORTHO05D007566 5.8e-168 594.3 336 83.3
Ca_12665_v3 Cicer arietinum L. HOM05D006006 ORTHO05D007566 2.4e-158 562.4 344 81.1
Lj1g0023019 Lotus japonicus HOM05D006006 ORTHO05D007566 1.0e-156 557.0 351 77.5
Glyma.13G039000 Glycine max HOM05D006006 ORTHO05D007566 6.2e-154 547.7 349 77.7
Glyma.14G123000 Glycine max HOM05D006006 ORTHO05D007566 7.6e-152 540.8 349 76.5
Lalb_Chr04g0263651 Lupinus albus HOM05D006006 ORTHO05D007566 4.2e-150 535.0 346 75.1
arahy.Tifrunner.gnm1.ann1.D9Y8GI Arachis hypogaea HOM05D006006 ORTHO05D007566 7.1e-150 534.3 351 74.6
arahy.Tifrunner.gnm1.ann1.T5RWDG Arachis hypogaea HOM05D006006 ORTHO05D007566 7.8e-149 530.8 351 74.1
Phvul.001G072900 Phaseolus vulgaris HOM05D006006 ORTHO05D007566 6.4e-143 511.1 347 73.2
Thecc.08G145800 Theobroma cacao HOM05D006006 ORTHO05D007566 1.1e-139 500.4 349 70.5
Duzib093G0547 Durio zibethinus HOM05D006006 ORTHO05D007566 5.8e-136 488.0 350 68.9
COL.COLO4_04848 Corchorus olitorius HOM05D006006 ORTHO05D007566 9.9e-136 487.3 349 68.8
Potri.002G071300 Populus trichocarpa HOM05D006006 ORTHO05D007566 4.9e-135 485.0 346 69.1
Cpa.g.sc49.54 Carica papaya HOM05D006006 ORTHO05D007566 6.4e-135 484.6 348 68.7
CiPaw.15G020800 Carya illinoinensis HOM05D006006 ORTHO05D007566 6.4e-135 484.6 350 68.3
Atru.chr13.1712 Acer truncatum HOM05D006006 ORTHO05D007566 8.4e-135 484.2 353 66.9
Sabra02G0056100 Salix brachista HOM05D006006 ORTHO05D007566 1.9e-134 483.0 345 68.4
VMungo0647G2124 Vigna mungo HOM05D006006 ORTHO05D007566 2.4e-134 482.6 330 73.3
QL02p024995 Quercus lobata HOM05D006006 ORTHO05D007566 5.4e-134 481.5 351 67.0
Lj7A365T41 Lonicera japonica HOM05D006006 ORTHO05D007566 1.2e-133 480.3 343 66.8
THA.LOC104813696 Tarenaya hassleriana HOM05D006006 ORTHO05D007566 3.5e-133 478.8 345 66.7
GSVIVG01010048001 Vitis vinifera HOM05D006006 ORTHO05D007566 3.5e-133 478.8 347 65.7
Gorai.005G081300 Gossypium raimondii HOM05D006006 ORTHO05D007566 4.6e-133 478.4 349 68.2
Gohir.D02G072100 Gossypium hirsutum HOM05D006006 ORTHO05D007566 1.0e-132 477.2 349 67.9
TAR381G0495 Trochodendron aralioides HOM05D006006 ORTHO05D007566 1.0e-132 477.2 348 66.4
Cfa018352 Carpinus fangiana HOM05D006006 ORTHO05D007566 8.7e-132 474.2 340 67.4
CAN.G62.45 Capsicum annuum HOM05D006006 ORTHO05D007566 1.9e-131 473.0 352 65.9
Manes.02G175900 Manihot esculenta HOM05D006006 ORTHO05D007566 2.5e-131 472.6 348 67.2
Gohir.A02G066200 Gossypium hirsutum HOM05D006006 ORTHO05D007566 4.3e-131 471.9 349 67.3
Thhalv10008107m.g Eutrema salsugineum HOM05D006006 ORTHO05D007566 5.6e-131 471.5 346 66.5
Eucgr.F04261 Eucalyptus grandis HOM05D006006 ORTHO05D007566 7.4e-131 471.1 337 68.2
Gohir.D03G061500 Gossypium hirsutum HOM05D006006 ORTHO05D007566 7.4e-131 471.1 348 67.5
Gorai.013G105300 Gossypium raimondii HOM05D006006 ORTHO05D007566 7.4e-131 471.1 348 67.2
Nn5g28652 Nelumbo nucifera HOM05D006006 ORTHO05D007566 1.3e-130 470.3 344 66.9
PGR042G3502 Punica granatum HOM05D006006 ORTHO05D007566 1.6e-130 469.9 348 66.1
Nitab4.5_0000633g0110 Nicotiana tabacum HOM05D006006 ORTHO05D007566 3.7e-130 468.8 351 66.1
CSS0049727 Camellia sinensis var. sinensis HOM05D006006 ORTHO05D007566 4.8e-130 468.4 350 65.4
Ciclev10001700m.g Citrus clementina HOM05D006006 ORTHO05D007566 6.2e-130 468.0 346 65.9
CANSAT25G3881 Cannabis sativa HOM05D006006 ORTHO05D007566 8.1e-130 467.6 350 67.1
TWI34G1885 Tripterygium wilfordii HOM05D006006 ORTHO05D007566 8.1e-130 467.6 339 66.7
CSS0044653 Camellia sinensis var. sinensis HOM05D006006 ORTHO05D007566 1.1e-129 467.2 350 65.4
Sopen06g020580 Solanum pennellii HOM05D006006 ORTHO05D007566 1.4e-129 466.8 351 66.1
PGSC0003DMG400017575 Solanum tuberosum HOM05D006006 ORTHO05D007566 1.4e-129 466.8 350 65.1
Oeu051259.1 Olea europaea HOM05D006006 ORTHO05D007566 1.8e-129 466.5 346 65.6
Solyc06g060460.3 Solanum lycopersicum HOM05D006006 ORTHO05D007566 2.4e-129 466.1 351 65.8
Prupe.8G021400 Prunus persica HOM05D006006 ORTHO05D007566 3.1e-129 465.7 347 67.1
CiPaw.16G016900 Carya illinoinensis HOM05D006006 ORTHO05D007566 5.3e-129 464.9 351 65.8
Aqoxy6G00385 Aquilegia oxysepala HOM05D006006 ORTHO05D007566 1.2e-128 463.8 348 65.5
ClCG09G009860 Citrullus lanatus HOM05D006006 ORTHO05D007566 1.5e-128 463.4 348 65.8
CsaV3_7G024870 Cucumis sativus L. HOM05D006006 ORTHO05D007566 4.5e-128 461.8 348 65.2
FvH4_2g14460 Fragaria vesca HOM05D006006 ORTHO05D007566 1.7e-127 459.9 344 66.0
Nn1g06190 Nelumbo nucifera HOM05D006006 ORTHO05D007566 1.7e-127 459.9 344 66.3
Carub.0001s2078 Capsella rubella HOM05D006006 ORTHO05D007566 2.2e-127 459.5 345 65.5
MBI03_g11319_MAGBIO Magnolia biondii HOM05D006006 ORTHO05D007566 2.9e-127 459.1 348 64.4
RcHm_v2.0_Chr6g0276791 Rosa chinensis HOM05D006006 ORTHO05D007566 3.8e-127 458.8 349 65.6
DCAR_008158 Daucus carota HOM05D006006 ORTHO05D007566 4.9e-127 458.4 342 64.3
ATR1136G139 Amborella trichopoda HOM05D006006 ORTHO05D007566 8.4e-127 457.6 347 64.6
AT1G21370 Arabidopsis thaliana HOM05D006006 ORTHO05D007566 1.1e-126 457.2 346 66.5
Sp1g18920 Schrenkiella parvula HOM05D006006 ORTHO05D007566 1.1e-126 457.2 348 65.2
Haze_17707 Corylus avellana HOM05D006006 ORTHO05D007566 1.4e-126 456.8 370 61.9
FAN24G1565 Fragaria x ananassa HOM05D006006 ORTHO05D007566 1.4e-126 456.8 344 65.7
Sed0017044 Sechium edule HOM05D006006 ORTHO05D007566 1.4e-126 456.8 343 64.1
MD10G1017500 Malus domestica HOM05D006006 ORTHO05D007566 1.9e-126 456.4 350 65.4
TWI60G1394 Tripterygium wilfordii HOM05D006006 ORTHO05D007566 1.9e-126 456.4 350 64.9
FAN27G0920 Fragaria x ananassa HOM05D006006 ORTHO05D007566 5.5e-126 454.9 344 65.1
FAN15G3392 Fragaria x ananassa HOM05D006006 ORTHO05D007566 1.6e-125 453.4 344 64.8
A06p17420 Brassica napus HOM05D006006 ORTHO05D007566 2.1e-125 453.0 347 65.4
BraA06t24839Z Brassica rapa HOM05D006006 ORTHO05D007566 7.9e-125 451.1 350 64.3
MD05G1017500 Malus domestica HOM05D006006 ORTHO05D007566 7.9e-125 451.1 347 64.8
Oeu014478.2 Olea europaea HOM05D006006 ORTHO05D007566 7.9e-125 451.1 367 61.3
CARHR021760 Cardamine hirsuta HOM05D006006 ORTHO05D007566 2.3e-124 449.5 348 62.4
BcaB07g32125 Brassica carinata HOM05D006006 ORTHO05D007566 8.7e-124 447.6 338 64.5
Aa31LG7G5530 Aethionema arabicum HOM05D006006 ORTHO05D007566 1.1e-123 447.2 346 63.9
C05p20260 Brassica napus HOM05D006006 ORTHO05D007566 1.5e-123 446.8 351 64.1
BolC5t30719H Brassica oleracea HOM05D006006 ORTHO05D007566 1.5e-123 446.8 351 64.1
HanXRQChr04g0109001 Helianthus annuus HOM05D006006 ORTHO05D007566 2.5e-123 446.0 347 66.0
BcaC05g26044 Brassica carinata HOM05D006006 ORTHO05D007566 3.3e-123 445.7 351 64.1
Lsat_1_v5_gn_1_8980 Lactuca sativa HOM05D006006 ORTHO05D007566 5.7e-123 444.9 293 72.7
MSTRG.24200 Avicennia marina HOM05D006006 ORTHO05D007566 7.4e-123 444.5 349 63.0
Ah.01g005030 Amaranthus hybridus HOM05D006006 ORTHO05D007566 3.7e-122 442.2 342 64.3
AL1G34470 Arabidopsis lyrata HOM05D006006 ORTHO05D007566 8.2e-122 441.0 295 70.5
Os04g0438500 Oryza sativa ssp. japonica HOM05D006006 ORTHO05D007566 1.4e-121 440.3 333 64.3
HanXRQChr08g0217661 Helianthus annuus HOM05D006006 ORTHO05D007566 2.4e-121 439.5 354 62.4
MELO3C023695.2 Cucumis melo HOM05D006006 ORTHO05D007566 3.1e-121 439.1 407 56.0
Migut.N03230 Erythranthe guttata HOM05D006006 ORTHO05D007566 3.1e-121 439.1 347 62.8
FAN20G0686 Fragaria x ananassa HOM05D006006 ORTHO05D007566 4.1e-121 438.7 376 59.6
PSO675G8728 Papaver somniferum HOM05D006006 ORTHO05D007566 2.6e-120 436.0 350 62.0
Cc10_g14250 Coffea canephora HOM05D006006 ORTHO05D007566 1.0e-119 434.1 323 65.3
PSO541G2188 Papaver somniferum HOM05D006006 ORTHO05D007566 1.3e-119 433.7 350 61.4
BcaB03g12819 Brassica carinata HOM05D006006 ORTHO05D007566 1.1e-118 430.6 324 64.8
EL10Ac9g20647 Beta vulgaris HOM05D006006 ORTHO05D007566 1.4e-118 430.3 340 62.1
Lj4A692T31 Lonicera japonica HOM05D006006 ORTHO05D007566 2.7e-117 426.0 348 60.3
SHI09110 Sapria himalayana HOM05D006006 ORTHO05D007566 2.7e-117 426.0 343 62.1
Zm00001eb422860 Zea mays HOM05D006006 ORTHO05D007566 3.5e-117 425.6 341 61.9
C08p20770 Brassica napus HOM05D006006 ORTHO05D007566 2.3e-116 422.9 325 63.1
CDE06G2625 Ceratophyllum demersum HOM05D006006 ORTHO05D007566 1.1e-113 414.1 243 76.5
unitig_744.g24565 Utricularia gibba HOM05D006006 ORTHO05D007566 1.8e-113 413.3 347 58.5
CDE08G1689 Ceratophyllum demersum HOM05D006006 ORTHO05D007566 3.1e-113 412.5 245 75.9
Actinidia15154 Actinidia chinensis HOM05D006006 ORTHO05D007566 1.5e-112 410.2 277 70.0
unitig_21.g20180 Utricularia gibba HOM05D006006 ORTHO05D007566 1.7e-111 406.8 347 57.9
HPP92_004629 Vanilla planifolia HOM05D006006 ORTHO05D007566 5.0e-111 405.2 339 58.1
ECA247G2705 Erigeron canadensis HOM05D006006 ORTHO05D007566 3.2e-110 402.5 245 75.5
Peaxi162Scf00051g00516 Petunia axillaris HOM05D006006 ORTHO05D007566 7.2e-110 401.4 234 77.8
BolC8t49716H Brassica oleracea HOM05D006006 ORTHO05D007566 9.1e-105 384.4 327 59.0
Mapoly0050s0105 Marchantia polymorpha HOM05D006006 ORTHO05D007566 1.8e-100 370.2 307 60.6
SEGI_37970 Sequoiadendron giganteum HOM05D006006 ORTHO05D007566 5.3e-97 358.6 331 59.2
Pp3c25_12020 Physcomitrium patens HOM05D006006 ORTHO05D007566 1.3e-95 354.0 329 54.1
BcaC07g39093 Brassica carinata HOM05D006006 ORTHO05D007566 4.8e-90 335.5 327 54.1
Dinv25817 Davidia involucrata HOM05D006006 ORTHO05D007566 1.1e-89 334.3 254 66.5
C06p40100 Brassica napus HOM05D006006 ORTHO05D007566 3.1e-89 332.8 232 67.7
SMO228G0011 Selaginella moellendorffii HOM05D006006 ORTHO05D007566 9.8e-83 311.2 245 60.0
Pp3c6_4630 Physcomitrium patens HOM05D006006 ORTHO05D007566 3.1e-81 306.2 324 49.7
Nitab4.5_0008475g0010 Nicotiana tabacum HOM05D006006 ORTHO05D007566 3.8e-79 299.3 246 62.6
Gohir.A02G108508 Gossypium hirsutum HOM05D006006 ORTHO05D007566 1.5e-78 297.4 245 63.7
Gohir.A02G108509 Gossypium hirsutum HOM05D006006 ORTHO05D007566 1.5e-78 297.4 245 63.7
Sc02g0004370 Simmondsia chinensis HOM05D006006 ORTHO05D007566 6.8e-76 288.5 237 58.6
SGA_v2.0_scaffold25G11170 Striga asiatica HOM05D006006 ORTHO05D007566 1.1e-73 281.2 245 59.6
AagrBONN_evm.TU.Sc2ySwM_344.2333 Anthoceros agrestis HOM05D006006 ORTHO05D007566 3.9e-63 246.1 173 67.1
MCO04G174 Micromonas commoda HOM05D006006 ORTHO05D007566 2.0e-59 233.8 248 46.8
TAR625G0955 Trochodendron aralioides HOM05D006006 ORTHO05D007566 1.0e-55 221.5 163 63.8
PRCOL_00006391 Prasinoderma coloniale HOM05D006006 ORTHO05D007566 8.1e-53 211.8 183 53.6
AUR62025132 Chenopodium quinoa HOM05D006006 ORTHO05D007566 9.2e-49 198.4 194 53.1
AUR62037127 Chenopodium quinoa HOM05D006006 ORTHO05D007566 1.6e-48 197.6 194 53.6
Cre02.g116000 Chlamydomonas reinhardtii HOM05D006006 ORTHO05D007566 7.8e-48 195.3 180 53.9
Pp3c5_24650 Physcomitrium patens HOM05D006006 ORTHO05D007566 6.8e-44 182.2 161 56.5
SGA_v2.0_scaffold35G14089 Striga asiatica HOM05D006006 ORTHO05D007566 8.4e-26 122.1 79 70.9
Ah.02g110550 Amaranthus hybridus HOM05D006006 ORTHO05D007566 7.9e-24 115.5 73 71.2
CDE04G1521 Ceratophyllum demersum HOM05D000566 ORTHO05D000686 7.6e-19 99.0 57 71.9
Pp3c16_22840 Physcomitrium patens HOM05D006006 ORTHO05D318415 4.2e-09 66.6 51 62.7


User provided reference genes

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