Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s5525g0040 Pisum sativum HOM05D000134 ORTHO05D320453 2.1e-51 205.3 98 100.0
Psat0s3156g0120 Pisum sativum HOM05D001399 ORTHO05D022282 4.7e-14 81.3 106 44.3
Psat6g122760 Pisum sativum HOM05D000740 ORTHO05D320401 1.5e-12 76.3 40 92.5
Medtr2g084120 Medicago truncatula HOM05D000134 ORTHO05D003318 1.5e-07 59.7 30 90.0
Psat0s625g0200 Pisum sativum HOM05D000085 ORTHO05D003318 1.5e-07 59.7 30 90.0
Psat5g252200 Pisum sativum HOM05D000134 ORTHO05D003318 1.5e-07 59.7 30 90.0
TPR.G21047 Trifolium pratense HOM05D000134 ORTHO05D003318 1.5e-07 59.7 30 90.0
Sabra14G0108100 Salix brachista HOM05D000134 ORTHO05D003318 5.5e-07 57.8 30 90.0
arahy.Tifrunner.gnm1.ann1.DTBC2U Arachis hypogaea HOM05D000134 ORTHO05D003318 9.4e-07 57.0 30 86.7
arahy.Tifrunner.gnm1.ann1.I1MI1E Arachis hypogaea HOM05D000134 ORTHO05D003318 9.4e-07 57.0 30 86.7
ClCG07G002710 Citrullus lanatus HOM05D000085 ORTHO05D003318 9.4e-07 57.0 30 86.7
Haze_13420 Corylus avellana HOM05D000134 ORTHO05D003318 9.4e-07 57.0 41 65.9
CsaV3_1G013280 Cucumis sativus L. HOM05D000134 ORTHO05D003318 9.4e-07 57.0 30 86.7
Thhalv10006022m.g Eutrema salsugineum HOM05D000134 ORTHO05D003318 9.4e-07 57.0 30 83.3
Psat4g034520 Pisum sativum HOM05D003680 ORTHO05D004264 9.4e-07 57.0 32 78.1
PGR142G2175 Punica granatum HOM05D000134 ORTHO05D003318 9.4e-07 57.0 30 86.7
Actinidia03639 Actinidia chinensis HOM05D000134 ORTHO05D003318 1.2e-06 56.6 55 52.7
Prupe.3G115500 Prunus persica HOM05D000134 ORTHO05D003318 1.2e-06 56.6 58 50.0
QL08p042199 Quercus lobata HOM05D000134 ORTHO05D003318 1.2e-06 56.6 30 83.3
GSVIVG01020728001 Vitis vinifera HOM05D000134 ORTHO05D003318 1.2e-06 56.6 30 86.7
Glyma.12G211800 Glycine max HOM05D000134 ORTHO05D003318 1.6e-06 56.2 30 86.7
Hma1.2p1_0178F.1_g078660 Hydrangea macrophylla HOM05D000134 ORTHO05D003318 1.6e-06 56.2 30 83.3
Lj3g0027553 Lotus japonicus HOM05D000134 ORTHO05D003318 1.6e-06 56.2 30 86.7
Sed0022674 Sechium edule HOM05D000134 ORTHO05D003318 1.6e-06 56.2 30 86.7
VMungo1080G0364 Vigna mungo HOM05D000134 ORTHO05D003318 1.6e-06 56.2 30 86.7
CDE10G1220 Ceratophyllum demersum HOM05D000134 ORTHO05D003318 2.1e-06 55.8 33 75.8
Ca_01863_v3 Cicer arietinum L. HOM05D000134 ORTHO05D003318 2.1e-06 55.8 30 83.3
Haze_13423 Corylus avellana HOM05D000134 ORTHO05D003318 2.1e-06 55.8 30 83.3
vmacro09208 Vaccinium macrocarpon HOM05D000134 ORTHO05D003318 2.1e-06 55.8 30 83.3
Actinidia00861 Actinidia chinensis HOM05D000134 ORTHO05D003318 2.7e-06 55.5 55 52.7
CSS0024179 Camellia sinensis var. sinensis HOM05D000134 ORTHO05D003318 3.6e-06 55.1 30 83.3
MELO3C004977.2 Cucumis melo HOM05D000134 ORTHO05D003318 3.6e-06 55.1 30 83.3
Glyma.13G289900 Glycine max HOM05D000134 ORTHO05D003318 3.6e-06 55.1 30 83.3
Aa31LG10G13300 Aethionema arabicum HOM05D000134 ORTHO05D003318 4.7e-06 54.7 30 80.0
CiPaw.04G134000 Carya illinoinensis HOM05D000134 ORTHO05D003318 4.7e-06 54.7 30 80.0
Dinv07681 Davidia involucrata HOM05D000134 ORTHO05D003318 4.7e-06 54.7 30 83.3
Rhsim04G0075100 Rhododendron simsii HOM05D000134 ORTHO05D003318 4.7e-06 54.7 30 80.0
AL5G40460 Arabidopsis lyrata HOM05D000134 ORTHO05D003318 6.1e-06 54.3 30 80.0
AT3G58690 Arabidopsis thaliana HOM05D000134 ORTHO05D003318 6.1e-06 54.3 30 80.0
BcaC07g40286 Brassica carinata HOM05D000134 ORTHO05D003318 6.1e-06 54.3 30 80.0
BcaC08g44938 Brassica carinata HOM05D001556 ORTHO05D003318 6.1e-06 54.3 30 80.0
A09p51220 Brassica napus HOM05D000134 ORTHO05D003318 6.1e-06 54.3 30 80.0
C06p25650 Brassica napus HOM05D000134 ORTHO05D003318 6.1e-06 54.3 30 80.0
C08p34010 Brassica napus HOM05D000134 ORTHO05D003318 6.1e-06 54.3 30 80.0
BolC6t37728H Brassica oleracea HOM05D000134 ORTHO05D003318 6.1e-06 54.3 30 80.0
BraA09t40565Z Brassica rapa HOM05D000134 ORTHO05D003318 6.1e-06 54.3 30 80.0
Carub.0005s2548 Capsella rubella HOM05D000134 ORTHO05D003318 6.1e-06 54.3 30 80.0
Manes.01G132200 Manihot esculenta HOM05D000134 ORTHO05D003318 6.1e-06 54.3 30 83.3
Phvul.005G094300 Phaseolus vulgaris HOM05D000134 ORTHO05D003318 6.1e-06 54.3 30 83.3
Sp5g04160 Schrenkiella parvula HOM05D000134 ORTHO05D003318 6.1e-06 54.3 30 80.0
CARHR169070 Cardamine hirsuta HOM05D000134 ORTHO05D003318 8.0e-06 53.9 30 80.0
Lj8C100T14 Lonicera japonica HOM05D000134 ORTHO05D003318 8.0e-06 53.9 30 80.0


User provided reference genes

Program Settings