Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s5166g0080 Pisum sativum HOM05D004754 ORTHO05D005566 4.3e-200 701.0 336 100.0
Psat5g233520 Pisum sativum HOM05D004754 ORTHO05D005566 2.2e-172 609.0 336 87.8
Ca_02551_v3 Cicer arietinum L. HOM05D004754 ORTHO05D005566 4.2e-171 604.7 337 87.2
Lj2g0020778 Lotus japonicus HOM05D004754 ORTHO05D005566 1.6e-167 592.8 336 83.0
Medtr3g010310 Medicago truncatula HOM05D004754 ORTHO05D005566 2.4e-166 589.0 338 84.9
Medtr0393s0030 Medicago truncatula HOM05D004754 ORTHO05D005566 6.9e-166 587.4 338 84.6
Ca_14146_v3 Cicer arietinum L. HOM05D004754 ORTHO05D005566 9.0e-166 587.0 337 84.6
Glyma.14G055800 Glycine max HOM05D004754 ORTHO05D005566 1.5e-165 586.3 336 83.9
Phvul.009G217100 Phaseolus vulgaris HOM05D004754 ORTHO05D005566 3.4e-165 585.1 336 83.6
VMungo1309G0019 Vigna mungo HOM05D004754 ORTHO05D005566 1.3e-161 573.2 336 82.1
TPR.G33233 Trifolium pratense HOM05D004754 ORTHO05D005566 3.9e-161 571.6 341 81.2
Thecc.02G011000 Theobroma cacao HOM05D004754 ORTHO05D005566 6.5e-156 554.3 336 79.2
Atru.chr10.946 Acer truncatum HOM05D004754 ORTHO05D005566 8.4e-156 553.9 336 80.1
Duzib248G0043 Durio zibethinus HOM05D004754 ORTHO05D005566 1.8e-153 546.2 336 77.4
Gorai.004G208700 Gossypium raimondii HOM05D004754 ORTHO05D005566 5.1e-153 544.7 336 76.8
Cfa020535 Carpinus fangiana HOM05D004754 ORTHO05D005566 1.1e-152 543.5 337 75.4
Gohir.A08G179300 Gossypium hirsutum HOM05D004754 ORTHO05D005566 1.9e-152 542.7 336 76.5
QL08p010099 Quercus lobata HOM05D004754 ORTHO05D005566 4.3e-152 541.6 335 75.5
Gohir.D08G197900 Gossypium hirsutum HOM05D004754 ORTHO05D005566 5.7e-152 541.2 336 76.5
QL05p054004 Quercus lobata HOM05D004754 ORTHO05D005566 5.7e-152 541.2 335 76.4
COL.COLO4_17670 Corchorus olitorius HOM05D004754 ORTHO05D005566 7.4e-152 540.8 334 77.8
TWI53G1117 Tripterygium wilfordii HOM05D004754 ORTHO05D005566 9.7e-152 540.4 336 75.6
Gorai.013G128400 Gossypium raimondii HOM05D004754 ORTHO05D005566 1.6e-151 539.7 336 76.2
Dinv32196 Davidia involucrata HOM05D004754 ORTHO05D005566 2.8e-151 538.9 335 76.7
Lalb_Chr12g0204311 Lupinus albus HOM05D004754 ORTHO05D005566 3.7e-151 538.5 334 78.1
RcHm_v2.0_Chr5g0015381 Rosa chinensis HOM05D004754 ORTHO05D005566 6.3e-151 537.7 337 75.1
Prupe.3G237900 Prunus persica HOM05D004754 ORTHO05D005566 8.2e-151 537.3 338 74.9
FvH4_2g14961 Fragaria vesca HOM05D004754 ORTHO05D005566 1.4e-150 536.6 337 74.8
Atru.chr10.952 Acer truncatum HOM05D004754 ORTHO05D005566 1.8e-150 536.2 336 78.3
Ciclev10015850m.g Citrus clementina HOM05D004754 ORTHO05D005566 2.4e-150 535.8 337 77.7
FAN24G0458 Fragaria x ananassa HOM05D004754 ORTHO05D005566 2.0e-149 532.7 337 74.5
Potri.017G048600 Populus trichocarpa HOM05D004754 ORTHO05D005566 3.4e-149 531.9 337 75.7
Manes.10G102700 Manihot esculenta HOM05D004754 ORTHO05D005566 2.2e-148 529.3 335 75.5
RcHm_v2.0_Chr5g0052721 Rosa chinensis HOM05D004754 ORTHO05D005566 2.2e-148 529.3 332 74.7
FAN15G1860 Fragaria x ananassa HOM05D004754 ORTHO05D005566 3.8e-148 528.5 337 73.6
Cpa.g.sc17.70 Carica papaya HOM05D004754 ORTHO05D005566 5.0e-148 528.1 337 75.4
CiPaw.12G121800 Carya illinoinensis HOM05D004754 ORTHO05D005566 1.2e-146 523.5 337 73.6
Dinv15895 Davidia involucrata HOM05D004754 ORTHO05D005566 2.7e-146 522.3 335 72.8
Lj1P1166T28 Lonicera japonica HOM05D004754 ORTHO05D005566 2.7e-146 522.3 337 73.0
Sc12g0003070 Simmondsia chinensis HOM05D004754 ORTHO05D005566 7.9e-146 520.8 337 71.5
CANSAT64G0220 Cannabis sativa HOM05D004754 ORTHO05D005566 1.0e-145 520.4 331 73.7
Hma1.2p1_1418F.1_g282250 Hydrangea macrophylla HOM05D004754 ORTHO05D005566 3.9e-145 518.5 336 74.1
vmacro03406 Vaccinium macrocarpon HOM05D004754 ORTHO05D005566 3.9e-145 518.5 332 72.3
CSS0007960 Camellia sinensis var. sinensis HOM05D004754 ORTHO05D005566 6.7e-145 517.7 335 72.8
CSS0038452 Camellia sinensis var. sinensis HOM05D004754 ORTHO05D005566 6.7e-145 517.7 335 72.8
MD17G1076300 Malus domestica HOM05D004754 ORTHO05D005566 1.1e-144 516.9 337 71.5
Prupe.1G099600 Prunus persica HOM05D004754 ORTHO05D005566 1.1e-144 516.9 339 72.0
Potri.007G112300 Populus trichocarpa HOM05D004754 ORTHO05D005566 5.7e-144 514.6 337 73.6
Sopen01g049820 Solanum pennellii HOM05D004754 ORTHO05D005566 9.7e-144 513.8 337 70.9
Sabra07G0091800 Salix brachista HOM05D004754 ORTHO05D005566 1.7e-143 513.1 337 73.3
Hund19582 Selenicereus undatus HOM05D004754 ORTHO05D005566 2.2e-143 512.7 336 70.8
AUR62008508 Chenopodium quinoa HOM05D004754 ORTHO05D005566 2.8e-143 512.3 329 71.7
Ah.02g113940 Amaranthus hybridus HOM05D004754 ORTHO05D005566 4.8e-143 511.5 336 69.9
Rhsim13G0119600 Rhododendron simsii HOM05D004754 ORTHO05D005566 1.4e-142 510.0 334 71.9
CAN.G1231.9 Capsicum annuum HOM05D004754 ORTHO05D005566 1.8e-142 509.6 337 71.2
CAN.G3385.2 Capsicum annuum HOM05D004754 ORTHO05D005566 1.8e-142 509.6 337 71.2
TAR624G1057 Trochodendron aralioides HOM05D004754 ORTHO05D005566 2.4e-142 509.2 337 73.3
Manes.07G037300 Manihot esculenta HOM05D004754 ORTHO05D005566 4.1e-142 508.4 335 73.1
PSO210G6921 Papaver somniferum HOM05D004754 ORTHO05D005566 4.1e-142 508.4 337 71.5
DCAR_005794 Daucus carota HOM05D004754 ORTHO05D005566 6.9e-142 507.7 328 72.9
TAR626G0708 Trochodendron aralioides HOM05D004754 ORTHO05D005566 3.4e-141 505.4 337 72.1
PSO210G1456 Papaver somniferum HOM05D004754 ORTHO05D005566 5.9e-141 504.6 337 70.3
Nitab4.5_0002815g0050 Nicotiana tabacum HOM05D004754 ORTHO05D005566 7.7e-141 504.2 337 70.6
Nitab4.5_0005392g0050 Nicotiana tabacum HOM05D004754 ORTHO05D005566 1.0e-140 503.8 337 70.6
Eucgr.K03201 Eucalyptus grandis HOM05D004754 ORTHO05D005566 1.7e-140 503.1 339 72.3
ClCG03G006380 Citrullus lanatus HOM05D004754 ORTHO05D005566 2.2e-140 502.7 332 71.1
Oeu018596.1 Olea europaea HOM05D004754 ORTHO05D005566 6.5e-140 501.1 337 71.2
EL10Ac5g11113 Beta vulgaris HOM05D004754 ORTHO05D005566 8.5e-140 500.7 333 69.7
Haze_09498 Corylus avellana HOM05D004754 ORTHO05D005566 8.5e-140 500.7 346 69.7
Lalb_Chr12g0204271 Lupinus albus HOM05D004754 ORTHO05D005566 1.9e-139 499.6 334 73.7
Rhsim01G0266600 Rhododendron simsii HOM05D004754 ORTHO05D005566 2.5e-139 499.2 334 70.4
Oeu010398.1 Olea europaea HOM05D004754 ORTHO05D005566 9.4e-139 497.3 335 71.0
Cc02_g19240 Coffea canephora HOM05D004754 ORTHO05D005566 2.1e-138 496.1 337 68.8
PGR031G3887 Punica granatum HOM05D004754 ORTHO05D005566 2.1e-138 496.1 336 70.8
Eucgr.E02475 Eucalyptus grandis HOM05D004754 ORTHO05D005566 3.6e-138 495.4 337 71.8
MSTRG.16715 Avicennia marina HOM05D004754 ORTHO05D005566 3.9e-137 491.9 337 69.1
Sed0000755 Sechium edule HOM05D004754 ORTHO05D005566 1.5e-136 490.0 329 70.8
THA.LOC104812357 Tarenaya hassleriana HOM05D004754 ORTHO05D005566 2.0e-136 489.6 334 70.1
MELO3C015347.2 Cucumis melo HOM05D004754 ORTHO05D005566 2.6e-136 489.2 329 70.5
AUR62001036 Chenopodium quinoa HOM05D004754 ORTHO05D005566 5.7e-136 488.0 336 68.2
CsaV3_1G039230 Cucumis sativus L. HOM05D004754 ORTHO05D005566 9.7e-136 487.3 330 70.6
AUR62004920 Chenopodium quinoa HOM05D004754 ORTHO05D005566 2.8e-135 485.7 336 67.6
SalBow6G1352 Salvia bowleyana HOM05D004754 ORTHO05D005566 1.1e-134 483.8 327 69.4
MBI10_g08558_MAGBIO Magnolia biondii HOM05D004754 ORTHO05D005566 1.4e-134 483.4 337 68.5
Migut.B00386 Erythranthe guttata HOM05D004754 ORTHO05D005566 2.0e-133 479.6 339 66.4
Sp6g03640 Schrenkiella parvula HOM05D004754 ORTHO05D005566 2.2e-132 476.1 337 65.9
ECA240G2987 Erigeron canadensis HOM05D004754 ORTHO05D005566 2.9e-132 475.7 338 67.5
MBI09_g11913_MAGBIO Magnolia biondii HOM05D004754 ORTHO05D005566 2.5e-131 472.6 344 67.4
PGSC0003DMG400025770 Solanum tuberosum HOM05D004754 ORTHO05D005566 1.6e-130 469.9 312 69.2
GSVIVG01021588001 Vitis vinifera HOM05D004754 ORTHO05D005566 1.6e-130 469.9 336 70.5
GSVIVG01027347001 Vitis vinifera HOM05D004754 ORTHO05D005566 2.7e-130 469.2 334 69.8
Carub.0006s3335 Capsella rubella HOM05D004754 ORTHO05D005566 1.8e-129 466.5 327 67.0
vmacro08577 Vaccinium macrocarpon HOM05D004754 ORTHO05D005566 6.7e-129 464.5 327 67.9
CARHR252140 Cardamine hirsuta HOM05D004754 ORTHO05D005566 1.5e-128 463.4 330 66.1
SGA_v2.0_scaffold172G38987 Striga asiatica HOM05D004754 ORTHO05D005566 4.4e-128 461.8 332 66.3
AL6G49030 Arabidopsis lyrata HOM05D004754 ORTHO05D005566 1.7e-127 459.9 337 64.4
BcaC04g23945 Brassica carinata HOM05D004754 ORTHO05D005566 3.1e-126 455.7 328 65.2
unitig_21.g20734 Utricularia gibba HOM05D004754 ORTHO05D005566 3.1e-126 455.7 328 65.5
C09p03030 Brassica napus HOM05D004754 ORTHO05D005566 4.1e-126 455.3 328 64.9
Aqoxy7G03057 Aquilegia oxysepala HOM05D004754 ORTHO05D005566 5.9e-125 451.4 336 64.3
HanXRQChr12g0360561 Helianthus annuus HOM05D004754 ORTHO05D005566 1.1e-123 447.2 334 65.3
Lsat_1_v5_gn_9_95240 Lactuca sativa HOM05D004754 ORTHO05D005566 1.9e-123 446.4 333 64.6
MD09G1087500 Malus domestica HOM05D004754 ORTHO05D005566 2.5e-123 446.0 336 63.7
AT4G05440 Arabidopsis thaliana HOM05D004754 ORTHO05D005566 5.5e-123 444.9 336 62.5
CDE02G1350 Ceratophyllum demersum HOM05D004754 ORTHO05D005566 7.5e-120 434.5 333 62.5
BcaB01g01919 Brassica carinata HOM05D004754 ORTHO05D005566 5.3e-118 428.3 329 62.6
Thhalv10028820m.g Eutrema salsugineum HOM05D004754 ORTHO05D005566 9.1e-118 427.6 336 61.6
BraA09t35937Z Brassica rapa HOM05D004754 ORTHO05D005566 1.2e-117 427.2 328 62.2
Aa31LG9G9140 Aethionema arabicum HOM05D004754 ORTHO05D005566 2.7e-117 426.0 314 65.3
A09p02940 Brassica napus HOM05D004754 ORTHO05D005566 3.8e-116 422.2 328 62.2
HanXRQChr03g0076141 Helianthus annuus HOM05D004754 ORTHO05D005566 3.2e-115 419.1 320 64.1
BolC9t53233H Brassica oleracea HOM05D004754 ORTHO05D005566 9.4e-115 417.5 332 60.8
RcHm_v2.0_Chr5g0052651 Rosa chinensis HOM05D004754 ORTHO05D005566 1.4e-113 413.7 288 69.1
AUR62021582 Chenopodium quinoa HOM05D004754 ORTHO05D005566 4.0e-113 412.1 333 60.4
ATR0584G072 Amborella trichopoda HOM05D004754 ORTHO05D005566 2.8e-111 406.0 377 53.8
PSO675G6933 Papaver somniferum HOM05D004754 ORTHO05D005566 3.7e-111 405.6 288 68.1
Medtr2g048690 Medicago truncatula HOM05D004754 ORTHO05D005566 2.3e-108 396.4 323 65.6
Lsat_1_v5_gn_9_95201 Lactuca sativa HOM05D004754 ORTHO05D005566 1.6e-106 390.2 312 60.9
Sc12g0003000 Simmondsia chinensis HOM05D004754 ORTHO05D005566 6.8e-105 384.8 263 68.1
Actinidia13483 Actinidia chinensis HOM05D004754 ORTHO05D005566 5.0e-100 368.6 261 67.4
Atru.chr10.956 Acer truncatum HOM05D004754 ORTHO05D005566 5.0e-92 342.0 217 78.3
SMO144G0026 Selaginella moellendorffii HOM05D004754 ORTHO05D005566 6.8e-89 331.6 340 51.8
AagrBONN_evm.TU.Sc2ySwM_344.1746 Anthoceros agrestis HOM05D004754 ORTHO05D005566 7.5e-88 328.2 385 47.3
AagrBONN_evm.TU.Sc2ySwM_228.5754 Anthoceros agrestis HOM05D004754 ORTHO05D005566 1.7e-87 327.0 337 50.4
Gohir.D13G114400 Gossypium hirsutum HOM05D004754 ORTHO05D005566 1.1e-86 324.3 209 75.6
AL6G49110 Arabidopsis lyrata HOM05D004754 ORTHO05D005566 2.3e-84 316.6 275 56.7
Pp3c20_22950 Physcomitrium patens HOM05D004754 ORTHO05D005566 1.8e-81 307.0 338 50.0
SEGI_36860 Sequoiadendron giganteum HOM05D004754 ORTHO05D005566 2.0e-80 303.5 337 49.0
Zm00001eb126310 Zea mays HOM05D004754 ORTHO05D005566 3.5e-77 292.7 404 41.1
Mapoly0049s0079 Marchantia polymorpha HOM05D004754 ORTHO05D005566 5.2e-73 278.9 274 52.9
Sc10g0000250 Simmondsia chinensis HOM05D004754 ORTHO05D005566 7.6e-72 275.0 192 65.1
Haze_09496 Corylus avellana HOM05D004754 ORTHO05D005566 3.8e-71 272.7 250 54.4
TPR.G5080 Trifolium pratense HOM05D004754 ORTHO05D005566 2.4e-70 270.0 155 81.3
QL05p054023 Quercus lobata HOM05D004754 ORTHO05D005566 2.5e-59 233.4 187 60.4
CBR_g50844 Chara braunii HOM05D004754 ORTHO05D005566 3.1e-57 226.5 185 55.7
VMungo1309G1961 Vigna mungo HOM05D004754 ORTHO05D005566 1.8e-52 210.7 336 42.3
PRCOL_00002688 Prasinoderma coloniale HOM05D004754 ORTHO05D005566 1.1e-51 208.0 371 34.8
Migut.N02733 Erythranthe guttata HOM05D004754 ORTHO05D005566 6.9e-49 198.7 143 62.2
MCO03G595 Micromonas commoda HOM05D004754 ORTHO05D005566 2.5e-46 190.3 248 44.8
ECA234G3378 Erigeron canadensis HOM05D004754 ORTHO05D000282 1.6e-45 187.6 134 65.7
HanXRQChr04g0094771 Helianthus annuus HOM05D004754 ORTHO05D005566 1.8e-41 174.1 154 56.5
Glyma.02G261200 Glycine max HOM05D004754 ORTHO05D005566 7.6e-40 168.7 91 83.5
Medtr8g072370 Medicago truncatula HOM05D004754 ORTHO05D005566 1.0e-39 168.3 152 59.2
HanXRQChr11g0343411 Helianthus annuus HOM05D004754 ORTHO05D005566 1.2e-37 161.4 137 57.7
HanXRQChr11g0343421 Helianthus annuus HOM05D004754 ORTHO05D005566 1.2e-37 161.4 137 57.7
Psat5g233560 Pisum sativum HOM05D004754 ORTHO05D005566 8.7e-36 155.2 109 74.3
Glyma.02G261300 Glycine max HOM05D004754 ORTHO05D005566 9.0e-33 145.2 89 82.0
Lj6C128T1 Lonicera japonica HOM05D004754 ORTHO05D005566 4.4e-19 99.8 69 66.7
Cre07.g312100 Chlamydomonas reinhardtii HOM05D004754 ORTHO05D005566 8.2e-18 95.5 412 23.8
HPP92_027351 Vanilla planifolia HOM05D004754 ORTHO05D005566 3.1e-17 93.6 76 53.9
Lju897C0T7 Lonicera japonica HOM05D004754 ORTHO05D005566 9.1e-17 92.0 69 63.8
Potri.017G049500 Populus trichocarpa HOM05D004754 ORTHO05D005566 1.0e-12 78.6 39 87.2
Potri.006G050600 Populus trichocarpa HOM05D004754 ORTHO05D005566 1.1e-09 68.6 51 70.6
Lju897C2T5 Lonicera japonica HOM05D004754 ORTHO05D005566 7.0e-09 65.9 61 54.1
HPP92_027352 Vanilla planifolia HOM05D004754 ORTHO05D005566 2.6e-08 63.9 87 41.4
DCAR_004803 Daucus carota HOM05D019807 ORTHO05D005566 2.9e-07 60.5 34 76.5


User provided reference genes

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