Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s4940g0080 Pisum sativum HOM05D000826 ORTHO05D324556 5.1e-75 284.3 137 100.0
TPR.G10177 Trifolium pratense HOM05D000826 ORTHO05D004603 2.7e-07 59.3 83 45.8
Lalb_Chr03g0040931 Lupinus albus HOM05D000826 ORTHO05D004603 5.9e-07 58.2 83 45.8
Nitab4.5_0005460g0020 Nicotiana tabacum HOM05D000826 ORTHO05D004603 5.9e-07 58.2 83 47.0
Glyma.07G118300 Glycine max HOM05D000826 ORTHO05D004603 7.7e-07 57.8 83 44.6
Glyma.10G255400 Glycine max HOM05D000826 ORTHO05D004603 1.0e-06 57.4 83 43.4
arahy.Tifrunner.gnm1.ann1.7661JY Arachis hypogaea HOM05D000826 ORTHO05D004603 1.3e-06 57.0 83 44.6
QL05p034039 Quercus lobata HOM05D000826 ORTHO05D004603 1.3e-06 57.0 83 45.8
FvH4_3g15500 Fragaria vesca HOM05D000826 ORTHO05D004603 1.7e-06 56.6 83 44.6
FAN11G0980 Fragaria x ananassa HOM05D000826 ORTHO05D004603 1.7e-06 56.6 83 44.6
FAN21G1090 Fragaria x ananassa HOM05D000826 ORTHO05D004603 1.7e-06 56.6 83 44.6
FAN25G3720 Fragaria x ananassa HOM05D000826 ORTHO05D004603 1.7e-06 56.6 83 44.6
MD05G1222800 Malus domestica HOM05D000826 ORTHO05D004603 1.7e-06 56.6 83 44.6
Nitab4.5_0000233g0210 Nicotiana tabacum HOM05D000826 ORTHO05D004603 1.7e-06 56.6 90 45.6
Phvul.006G002000 Phaseolus vulgaris HOM05D000826 ORTHO05D004603 1.7e-06 56.6 86 43.0
arahy.Tifrunner.gnm1.ann1.X7CJIX Arachis hypogaea HOM05D000826 ORTHO05D004603 2.3e-06 56.2 83 44.6
CAN.G981.30 Capsicum annuum HOM05D000826 ORTHO05D004603 2.3e-06 56.2 83 47.0
Ca_07418_v3 Cicer arietinum L. HOM05D000826 ORTHO05D004603 2.3e-06 56.2 83 43.4
MD10G1204400 Malus domestica HOM05D000826 ORTHO05D004603 2.3e-06 56.2 83 44.6
MD17G1219100 Malus domestica HOM05D000826 ORTHO05D004603 2.3e-06 56.2 83 44.6
TPR.G32122 Trifolium pratense HOM05D000826 ORTHO05D004603 2.3e-06 56.2 83 41.0
Haze_07840 Corylus avellana HOM05D000826 ORTHO05D004603 2.9e-06 55.8 83 44.6
Gorai.006G107600 Gossypium raimondii HOM05D000826 ORTHO05D004603 2.9e-06 55.8 90 40.0
Sed0023373 Sechium edule HOM05D000826 ORTHO05D004603 2.9e-06 55.8 83 43.4
VMungo0647G2353 Vigna mungo HOM05D000826 ORTHO05D004603 2.9e-06 55.8 83 43.4
ClCG09G003180 Citrullus lanatus HOM05D000826 ORTHO05D004603 3.8e-06 55.5 83 42.2
MELO3C023453.2 Cucumis melo HOM05D000826 ORTHO05D004603 3.8e-06 55.5 83 42.2
CsaV3_7G032040 Cucumis sativus L. HOM05D000826 ORTHO05D004603 3.8e-06 55.5 83 42.2
Lj3g0004181 Lotus japonicus HOM05D000826 ORTHO05D004603 3.8e-06 55.5 83 43.4
Sed0016290 Sechium edule HOM05D000826 ORTHO05D004603 3.8e-06 55.5 83 43.4
Cc04_g04810 Coffea canephora HOM05D000826 ORTHO05D004603 5.0e-06 55.1 83 42.2
Cc11_g02220 Coffea canephora HOM05D000826 ORTHO05D004603 5.0e-06 55.1 83 42.2
FAN16G1939 Fragaria x ananassa HOM05D000826 ORTHO05D004603 5.0e-06 55.1 80 45.0
Gohir.D09G091300 Gossypium hirsutum HOM05D000826 ORTHO05D004603 5.0e-06 55.1 80 43.8
Medtr7g451450 Medicago truncatula HOM05D000826 ORTHO05D004603 5.0e-06 55.1 83 42.2
PGR031G0489 Punica granatum HOM05D000826 ORTHO05D004603 5.0e-06 55.1 83 44.6
RcHm_v2.0_Chr5g0026121 Rosa chinensis HOM05D000826 ORTHO05D004603 5.0e-06 55.1 80 45.0
Sopen08g028700 Solanum pennellii HOM05D000826 ORTHO05D004603 5.0e-06 55.1 90 44.4
PGSC0003DMG400022742 Solanum tuberosum HOM05D000826 ORTHO05D004603 5.0e-06 55.1 90 44.4
VMungo0720G2303 Vigna mungo HOM05D000826 ORTHO05D004603 5.0e-06 55.1 83 42.2
Gohir.D09G091400 Gossypium hirsutum HOM05D000826 ORTHO05D004603 6.6e-06 54.7 88 39.8
Lj1g0012152 Lotus japonicus HOM05D000826 ORTHO05D004603 6.6e-06 54.7 83 42.2
Prupe.3G094600 Prunus persica HOM05D000826 ORTHO05D004603 6.6e-06 54.7 83 44.6
Solyc08g080370.3 Solanum lycopersicum HOM05D000826 ORTHO05D004603 6.6e-06 54.7 90 43.3
Cfa019411 Carpinus fangiana HOM05D000826 ORTHO05D004603 8.6e-06 54.3 83 43.4
Lj6A64T35 Lonicera japonica HOM05D000826 ORTHO05D004603 8.6e-06 54.3 83 43.4


User provided reference genes

Program Settings