Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s4884g0040 Pisum sativum HOM05D000395 ORTHO05D000088 4.6e-135 484.6 245 100.0
Psat0s4089g0040 Pisum sativum HOM05D000395 ORTHO05D000088 9.8e-45 184.5 163 63.2
Medtr1g035640 Medicago truncatula HOM05D000395 ORTHO05D000088 5.1e-25 119.0 187 41.2
TPR.G11168 Trifolium pratense HOM05D000395 ORTHO05D000088 1.9e-24 117.1 193 36.3
TPR.G38419 Trifolium pratense HOM05D000395 ORTHO05D000088 2.8e-23 113.2 172 41.3
TPR.G11172 Trifolium pratense HOM05D000395 ORTHO05D000088 2.6e-21 106.7 162 43.8
TPR.G14831 Trifolium pratense HOM05D000395 ORTHO05D000088 3.4e-21 106.3 181 35.4
TPR.G11175 Trifolium pratense HOM05D000395 ORTHO05D000088 7.6e-21 105.1 214 33.6
Medtr1g035570 Medicago truncatula HOM05D000395 ORTHO05D000088 1.9e-19 100.5 161 39.1
Medtr1g035620 Medicago truncatula HOM05D000395 ORTHO05D000088 7.1e-19 98.6 166 38.0
Medtr1g035490 Medicago truncatula HOM05D000395 ORTHO05D000088 1.0e-17 94.7 194 36.6
TPR.G11177 Trifolium pratense HOM05D000395 ORTHO05D000088 3.0e-17 93.2 124 42.7
Medtr1g050845 Medicago truncatula HOM05D000004 ORTHO05D000002 1.5e-16 90.9 152 37.5
TPR.G11162 Trifolium pratense HOM05D000395 ORTHO05D000088 3.3e-16 89.7 154 37.7
TPR.G35646 Trifolium pratense HOM05D000395 ORTHO05D000088 1.8e-14 84.0 191 31.9
Medtr6g061070 Medicago truncatula HOM05D000395 ORTHO05D000088 2.4e-14 83.6 138 37.0
Psat6g099880 Pisum sativum HOM05D000395 ORTHO05D000088 4.0e-14 82.8 183 36.1
Psat6g098240 Pisum sativum HOM05D000395 ORTHO05D000088 1.2e-13 81.3 98 43.9
TPR.G14788 Trifolium pratense HOM05D000395 ORTHO05D000088 2.0e-13 80.5 154 37.0
TPR.G11163 Trifolium pratense HOM05D000395 ORTHO05D000088 1.3e-12 77.8 155 36.1
TPR.G34676 Trifolium pratense HOM05D000395 ORTHO05D000088 2.2e-12 77.0 97 41.2
Lj1g0007361 Lotus japonicus HOM05D000395 ORTHO05D000088 3.8e-12 76.3 159 32.1
TPR.G3547 Trifolium pratense HOM05D000395 ORTHO05D000088 2.7e-10 70.1 173 32.9
Manes.07G115200 Manihot esculenta HOM05D000395 ORTHO05D000088 1.0e-09 68.2 139 36.7
arahy.Tifrunner.gnm1.ann1.335W22 Arachis hypogaea HOM05D000395 ORTHO05D000088 7.3e-08 62.0 129 33.3
TPR.G11165 Trifolium pratense HOM05D000395 ORTHO05D000088 7.3e-08 62.0 147 28.6
Lj2g0006674 Lotus japonicus HOM05D000395 ORTHO05D000088 1.3e-07 61.2 105 32.4
RcHm_v2.0_Chr7g0227261 Rosa chinensis HOM05D000395 ORTHO05D000088 1.3e-07 61.2 97 35.1
TPR.G11166 Trifolium pratense HOM05D000395 ORTHO05D000088 1.3e-07 61.2 116 31.9
Lj2g0007049 Lotus japonicus HOM05D000395 ORTHO05D000088 2.1e-07 60.5 107 34.6
arahy.Tifrunner.gnm1.ann1.KVNU80 Arachis hypogaea HOM05D000395 ORTHO05D000088 3.6e-07 59.7 129 32.6
RcHm_v2.0_Chr7g0227351 Rosa chinensis HOM05D000395 ORTHO05D000088 4.8e-07 59.3 97 36.1
Lj1g0017480 Lotus japonicus HOM05D000395 ORTHO05D000088 6.2e-07 58.9 154 30.5
RcHm_v2.0_Chr2g0103401 Rosa chinensis HOM05D000395 ORTHO05D000088 1.1e-06 58.2 97 33.0
MBI16_g26331_MAGBIO Magnolia biondii HOM05D000395 ORTHO05D000088 1.4e-06 57.8 118 28.8
FvH4_1g14640 Fragaria vesca HOM05D000395 ORTHO05D000088 1.8e-06 57.4 96 32.3
Phvul.007G041900 Phaseolus vulgaris HOM05D000395 ORTHO05D000088 1.8e-06 57.4 106 33.0
Lj2g0021298 Lotus japonicus HOM05D000395 ORTHO05D000088 2.4e-06 57.0 148 31.8
FvH4_2g13150 Fragaria vesca HOM05D000011 ORTHO05D000157 3.1e-06 56.6 97 29.9
Lj5g0011145 Lotus japonicus HOM05D000395 ORTHO05D000088 4.0e-06 56.2 167 28.1
Lj1g0013794 Lotus japonicus HOM05D000395 ORTHO05D000088 9.0e-06 55.1 112 33.9


User provided reference genes

Program Settings