Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s4762g0040 Pisum sativum HOM05D002821 ORTHO05D003072 1.8e-49 198.7 90 100.0
Dinv37277 Davidia involucrata HOM05D002821 ORTHO05D003072 7.8e-08 60.5 51 60.8
Lalb_Chr25g0289161 Lupinus albus HOM05D002821 ORTHO05D003072 7.8e-08 60.5 89 40.4
CiPaw.13G110900 Carya illinoinensis HOM05D002821 ORTHO05D003072 1.0e-07 60.1 96 40.6
AL4G33520 Arabidopsis lyrata HOM05D002821 ORTHO05D003072 1.7e-07 59.3 49 59.2
Carub.0004s1905 Capsella rubella HOM05D002821 ORTHO05D003072 1.7e-07 59.3 88 38.6
Carub.0005s1994 Capsella rubella HOM05D002821 ORTHO05D003072 1.7e-07 59.3 93 36.6
CARHR131670 Cardamine hirsuta HOM05D002821 ORTHO05D003072 1.7e-07 59.3 87 39.1
Lj1g0009239 Lotus japonicus HOM05D002821 ORTHO05D003072 1.7e-07 59.3 103 37.9
Aqoxy4G03252 Aquilegia oxysepala HOM05D002821 ORTHO05D003072 2.3e-07 58.9 51 58.8
CANSAT80G0249 Cannabis sativa HOM05D002821 ORTHO05D003072 2.3e-07 58.9 51 58.8
Dinv35749 Davidia involucrata HOM05D002821 ORTHO05D003072 2.3e-07 58.9 51 60.8
PSO339G1802 Papaver somniferum HOM05D002821 ORTHO05D003072 2.3e-07 58.9 103 35.9
Psat3g042720 Pisum sativum HOM05D002821 ORTHO05D003072 2.3e-07 58.9 105 38.1
TAR369G0659 Trochodendron aralioides HOM05D002821 ORTHO05D003072 2.3e-07 58.9 96 40.6
arahy.Tifrunner.gnm1.ann1.AE9G4B Arachis hypogaea HOM05D002821 ORTHO05D003072 3.0e-07 58.5 51 58.8
Eucgr.K03239 Eucalyptus grandis HOM05D002821 ORTHO05D003072 3.0e-07 58.5 51 56.9
Peaxi162Scf00182g00113 Petunia axillaris HOM05D002821 ORTHO05D003072 3.0e-07 58.5 51 56.9
QL01p022665 Quercus lobata HOM05D002821 ORTHO05D003072 3.0e-07 58.5 102 38.2
QL01p022708 Quercus lobata HOM05D002821 ORTHO05D003072 3.0e-07 58.5 102 38.2
SalBow3G3301 Salvia bowleyana HOM05D002821 ORTHO05D003072 3.0e-07 58.5 51 58.8
Aa31LG5G22460 Aethionema arabicum HOM05D002821 ORTHO05D003072 3.9e-07 58.2 100 35.0
AT2G37160 Arabidopsis thaliana HOM05D002821 ORTHO05D003072 3.9e-07 58.2 49 59.2
BcaB01g00281 Brassica carinata HOM05D002821 ORTHO05D003072 3.9e-07 58.2 49 57.1
BcaB02g08528 Brassica carinata HOM05D002821 ORTHO05D003072 3.9e-07 58.2 49 57.1
BcaC02g09169 Brassica carinata HOM05D002821 ORTHO05D003072 3.9e-07 58.2 49 57.1
A04p06170 Brassica napus HOM05D002821 ORTHO05D003072 3.9e-07 58.2 49 57.1
A09p46390 Brassica napus HOM05D002821 ORTHO05D003072 3.9e-07 58.2 49 57.1
C04p39190 Brassica napus HOM05D002821 ORTHO05D003072 3.9e-07 58.2 49 57.1
C08p28730 Brassica napus HOM05D002821 ORTHO05D003072 3.9e-07 58.2 49 57.1
BolC4t25491H Brassica oleracea HOM05D002821 ORTHO05D003072 3.9e-07 58.2 49 57.1
BolC8t50477H Brassica oleracea HOM05D002821 ORTHO05D003072 3.9e-07 58.2 49 57.1
BraA09t40104Z Brassica rapa HOM05D002821 ORTHO05D003072 3.9e-07 58.2 49 57.1
Duzib128G1944 Durio zibethinus HOM05D002821 ORTHO05D003072 3.9e-07 58.2 51 58.8
Thhalv10016480m.g Eutrema salsugineum HOM05D002821 ORTHO05D003072 3.9e-07 58.2 49 59.2
Nitab4.5_0000101g0030 Nicotiana tabacum HOM05D002821 ORTHO05D003072 3.9e-07 58.2 51 56.9
Phvul.001G176500 Phaseolus vulgaris HOM05D002821 ORTHO05D003072 3.9e-07 58.2 87 39.1
Sp4g19470 Schrenkiella parvula HOM05D002821 ORTHO05D003072 3.9e-07 58.2 49 59.2
Sp5g08950 Schrenkiella parvula HOM05D002821 ORTHO05D003072 3.9e-07 58.2 49 57.1
Solyc09g007670.3 Solanum lycopersicum HOM05D002821 ORTHO05D003072 3.9e-07 58.2 51 56.9
Sopen09g002560 Solanum pennellii HOM05D002821 ORTHO05D003072 3.9e-07 58.2 51 56.9
PGSC0003DMG400001755 Solanum tuberosum HOM05D002821 ORTHO05D003072 3.9e-07 58.2 51 56.9
MSTRG.5735 Avicennia marina HOM05D002821 ORTHO05D003072 5.1e-07 57.8 51 58.8
Cc06_g03840 Coffea canephora HOM05D002821 ORTHO05D003072 5.1e-07 57.8 51 56.9
DCAR_017711 Daucus carota HOM05D002821 ORTHO05D003072 5.1e-07 57.8 51 58.8
Glyma.03G180100 Glycine max HOM05D002821 ORTHO05D003072 5.1e-07 57.8 37 73.0
Glyma.19G180800 Glycine max HOM05D002821 ORTHO05D003072 5.1e-07 57.8 37 73.0
ClCG03G002230 Citrullus lanatus HOM05D002821 ORTHO05D003072 6.6e-07 57.4 90 41.1
MELO3C005053.2 Cucumis melo HOM05D002821 ORTHO05D003072 6.6e-07 57.4 90 41.1
CsaV3_1G012910 Cucumis sativus L. HOM05D002821 ORTHO05D003072 6.6e-07 57.4 90 41.1
PGR142G2897 Punica granatum HOM05D002821 ORTHO05D003072 6.6e-07 57.4 51 56.9
VMungo1383G0431 Vigna mungo HOM05D002821 ORTHO05D003072 6.6e-07 57.4 89 39.3
Thhalv10010255m.g Eutrema salsugineum HOM05D002821 ORTHO05D003072 8.7e-07 57.0 49 55.1
TPR.G18263 Trifolium pratense HOM05D002821 ORTHO05D003072 8.7e-07 57.0 105 37.1
Manes.09G069301 Manihot esculenta HOM05D002821 ORTHO05D003072 1.1e-06 56.6 52 61.5
Nitab4.5_0005150g0060 Nicotiana tabacum HOM05D002821 ORTHO05D003072 1.1e-06 56.6 27 85.2
Migut.J00555 Erythranthe guttata HOM05D002821 ORTHO05D003072 1.5e-06 56.2 95 36.8
PSO384G3922 Papaver somniferum HOM05D002821 ORTHO05D003072 1.5e-06 56.2 51 54.9
Potri.016G088800 Populus trichocarpa HOM05D002821 ORTHO05D003072 1.5e-06 56.2 95 40.0
Peaxi162Scf00488g00915 Petunia axillaris HOM05D002821 ORTHO05D003072 1.9e-06 55.8 51 56.9
Rhsim01G0218000 Rhododendron simsii HOM05D002821 ORTHO05D003072 1.9e-06 55.8 93 39.8
CSS0023677 Camellia sinensis var. sinensis HOM05D002821 ORTHO05D003072 2.5e-06 55.5 88 40.9
CiPaw.13G111100 Carya illinoinensis HOM05D002821 ORTHO05D003072 2.5e-06 55.5 98 35.7
Manes.08G006000 Manihot esculenta HOM05D002821 ORTHO05D003072 2.5e-06 55.5 50 62.0
Nn2g13069 Nelumbo nucifera HOM05D002821 ORTHO05D003072 2.5e-06 55.5 101 37.6
QL07p044666 Quercus lobata HOM05D002821 ORTHO05D003072 2.5e-06 55.5 33 69.7
BraA04t16320Z Brassica rapa HOM05D002821 ORTHO05D003072 3.3e-06 55.1 49 55.1
CARHR163280 Cardamine hirsuta HOM05D002821 ORTHO05D003072 3.3e-06 55.1 49 55.1
Gohir.A09G150500 Gossypium hirsutum HOM05D002821 ORTHO05D003072 3.3e-06 55.1 52 57.7
Gohir.D09G146200 Gossypium hirsutum HOM05D002821 ORTHO05D003072 3.3e-06 55.1 52 57.7
Gorai.006G167400 Gossypium raimondii HOM05D002821 ORTHO05D003072 3.3e-06 55.1 52 57.7
Lalb_Chr20g0112761 Lupinus albus HOM05D002821 ORTHO05D003072 3.3e-06 55.1 51 54.9
MBI11_g23473_MAGBIO Magnolia biondii HOM05D002821 ORTHO05D003072 3.3e-06 55.1 52 59.6
Potri.006G129100 Populus trichocarpa HOM05D002821 ORTHO05D003072 3.3e-06 55.1 50 60.0
Sabra06G0101600 Salix brachista HOM05D002821 ORTHO05D003072 3.3e-06 55.1 50 60.0
THA.LOC104806502 Tarenaya hassleriana HOM05D002821 ORTHO05D003072 3.3e-06 55.1 50 60.0
Actinidia26435 Actinidia chinensis HOM05D002821 ORTHO05D003072 4.3e-06 54.7 50 58.0
Aa31LG5G22480 Aethionema arabicum HOM05D002821 ORTHO05D003072 4.3e-06 54.7 49 55.1
COL.COLO4_27040 Corchorus olitorius HOM05D002821 ORTHO05D003072 4.3e-06 54.7 43 65.1
Gohir.A04G074800 Gossypium hirsutum HOM05D002821 ORTHO05D003072 4.3e-06 54.7 41 68.3
Gohir.D04G113600 Gossypium hirsutum HOM05D002821 ORTHO05D003072 4.3e-06 54.7 41 68.3
MD04G1099900 Malus domestica HOM05D002821 ORTHO05D003072 4.3e-06 54.7 50 60.0
TAR623G1157 Trochodendron aralioides HOM05D002821 ORTHO05D003072 4.3e-06 54.7 52 59.6
GSVIVG01025168001 Vitis vinifera HOM05D002821 ORTHO05D003072 4.3e-06 54.7 52 57.7
CiPaw.10G134500 Carya illinoinensis HOM05D002821 ORTHO05D003072 5.6e-06 54.3 52 55.8
Haze_23873 Corylus avellana HOM05D002821 ORTHO05D003072 5.6e-06 54.3 52 59.6
Lalb_Chr01g0018901 Lupinus albus HOM05D002821 ORTHO05D003072 5.6e-06 54.3 51 56.9
Medtr7g101110 Medicago truncatula HOM05D002821 ORTHO05D003072 5.6e-06 54.3 106 37.7
SGA_v2.0_scaffold75G24869 Striga asiatica HOM05D002821 ORTHO05D003072 5.6e-06 54.3 51 52.9
GSVIVG01025672001 Vitis vinifera HOM05D002821 ORTHO05D003072 5.6e-06 54.3 40 67.5
Actinidia19682 Actinidia chinensis HOM05D002821 ORTHO05D003072 7.3e-06 53.9 32 68.8
Cfa017537 Carpinus fangiana HOM05D002821 ORTHO05D003072 7.3e-06 53.9 27 81.5
AUR62039620 Chenopodium quinoa HOM05D002821 ORTHO05D003072 7.3e-06 53.9 90 38.9
Haze_20611 Corylus avellana HOM05D002821 ORTHO05D003072 7.3e-06 53.9 27 81.5
Duzib093G0865 Durio zibethinus HOM05D002821 ORTHO05D003072 7.3e-06 53.9 52 57.7
Duzib106G1856 Durio zibethinus HOM05D002821 ORTHO05D003072 7.3e-06 53.9 43 65.1
Glyma.10G051600 Glycine max HOM05D002821 ORTHO05D003072 7.3e-06 53.9 47 61.7
Glyma.13G139100 Glycine max HOM05D002821 ORTHO05D003072 7.3e-06 53.9 47 61.7
Sabra16G0094500 Salix brachista HOM05D002821 ORTHO05D003072 7.3e-06 53.9 38 71.1
Solyc10g086070.2 Solanum lycopersicum HOM05D002821 ORTHO05D003072 7.3e-06 53.9 51 54.9
Sopen10g035440 Solanum pennellii HOM05D002821 ORTHO05D003072 7.3e-06 53.9 51 54.9
PGSC0003DMG400017607 Solanum tuberosum HOM05D002821 ORTHO05D003072 7.3e-06 53.9 51 54.9
TWI53G1126 Tripterygium wilfordii HOM05D002821 ORTHO05D003072 7.3e-06 53.9 51 56.9
TWI74G1325 Tripterygium wilfordii HOM05D002821 ORTHO05D003072 7.3e-06 53.9 51 56.9
unitig_22.g5086 Utricularia gibba HOM05D002821 ORTHO05D003072 7.3e-06 53.9 48 50.0
vmacro14447 Vaccinium macrocarpon HOM05D002821 ORTHO05D003072 7.3e-06 53.9 90 40.0
Gohir.D13G023900 Gossypium hirsutum HOM05D002821 ORTHO05D003072 9.6e-06 53.5 34 76.5
Gorai.013G027000 Gossypium raimondii HOM05D002821 ORTHO05D003072 9.6e-06 53.5 34 76.5
Rhsim05G0182300 Rhododendron simsii HOM05D002821 ORTHO05D003072 9.6e-06 53.5 51 54.9
Sed0027419 Sechium edule HOM05D002821 ORTHO05D003072 9.6e-06 53.5 90 40.0
Thecc.05G057700 Theobroma cacao HOM05D002821 ORTHO05D003072 9.6e-06 53.5 52 57.7


User provided reference genes

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