Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s4110g0040 Pisum sativum HOM05D002816 ORTHO05D020972 6.3e-120 434.1 218 100.0
Psat7g208880 Pisum sativum HOM05D002816 ORTHO05D020972 4.7e-107 391.3 201 97.5
Psat6g115360 Pisum sativum HOM05D002816 ORTHO05D020972 1.2e-91 340.1 215 83.3
Psat7g208840 Pisum sativum HOM05D002816 ORTHO05D020972 2.1e-91 339.3 217 82.5
Psat1g045080 Pisum sativum HOM05D002816 ORTHO05D005633 5.5e-55 218.4 117 98.3
Psat1g045000 Pisum sativum HOM05D002816 ORTHO05D020972 7.1e-55 218.0 115 99.1
Psat3g108720 Pisum sativum HOM05D002816 ORTHO05D020972 8.1e-51 204.5 117 93.2
Psat5g289080 Pisum sativum HOM05D002816 ORTHO05D005633 1.0e-48 197.6 107 97.2
Medtr2g098490 Medicago truncatula HOM05D002816 ORTHO05D005633 3.3e-44 182.6 141 73.8
TPR.G18843 Trifolium pratense HOM05D002816 ORTHO05D005633 3.3e-44 182.6 115 86.1
Psat6g177280 Pisum sativum HOM05D002816 ORTHO05D020972 2.8e-43 179.5 97 96.9
Lj3g0016219 Lotus japonicus HOM05D002816 ORTHO05D005633 2.3e-37 159.8 113 76.1
Glyma.15G031700 Glycine max HOM05D002816 ORTHO05D005633 8.7e-37 157.9 114 75.4
Glyma.13G342600 Glycine max HOM05D002816 ORTHO05D005633 2.5e-36 156.4 114 74.6
VMungo1080G0972 Vigna mungo HOM05D002816 ORTHO05D005633 2.4e-34 149.8 114 70.2
arahy.Tifrunner.gnm1.ann1.YK6NC6 Arachis hypogaea HOM05D002816 ORTHO05D005633 2.5e-31 139.8 111 66.7
arahy.Tifrunner.gnm1.ann1.4LCW9K Arachis hypogaea HOM05D002816 ORTHO05D005633 3.2e-31 139.4 111 67.6
Lj3g0024115 Lotus japonicus HOM05D002816 ORTHO05D005633 1.6e-30 137.1 115 66.1
VMungo1127G0859 Vigna mungo HOM05D002816 ORTHO05D005633 2.1e-30 136.7 113 64.6
Psat7g213680 Pisum sativum HOM05D002816 ORTHO05D005633 6.1e-30 135.2 114 67.5
Medtr4g066130 Medicago truncatula HOM05D002816 ORTHO05D005633 7.9e-30 134.8 114 66.7
Manes.14G014200 Manihot esculenta HOM05D002816 ORTHO05D005633 1.0e-29 134.4 183 44.8
TPR.G13661 Trifolium pratense HOM05D004419 ORTHO05D005633 1.1e-28 131.0 162 49.4
Lalb_Chr03g0026201 Lupinus albus HOM05D002816 ORTHO05D005633 2.6e-28 129.8 114 63.2
Haze_23048 Corylus avellana HOM05D002816 ORTHO05D005633 3.3e-28 129.4 111 58.6
Eucgr.J00812 Eucalyptus grandis HOM05D002816 ORTHO05D005633 4.4e-28 129.0 113 54.0
CSS0044925 Camellia sinensis var. sinensis HOM05D002816 ORTHO05D005633 7.4e-28 128.3 127 52.8
Cfa009698 Carpinus fangiana HOM05D002816 ORTHO05D005633 2.2e-27 126.7 111 56.8
Ciclev10017962m.g Citrus clementina HOM05D002816 ORTHO05D005633 2.8e-27 126.3 157 46.5
Dinv36301 Davidia involucrata HOM05D002816 ORTHO05D005633 2.8e-27 126.3 109 57.8
GSVIVG01025332001 Vitis vinifera HOM05D002816 ORTHO05D005633 4.8e-27 125.6 110 56.4
arahy.Tifrunner.gnm1.ann1.S74NHW Arachis hypogaea HOM05D002816 ORTHO05D005633 6.3e-27 125.2 110 64.5
arahy.Tifrunner.gnm1.ann1.D5VX0F Arachis hypogaea HOM05D002816 ORTHO05D005633 8.2e-27 124.8 110 64.5
Eucgr.J00816 Eucalyptus grandis HOM05D002816 ORTHO05D005633 8.2e-27 124.8 113 54.0
CSS0023415 Camellia sinensis var. sinensis HOM05D002816 ORTHO05D005633 1.4e-26 124.0 127 51.2
CANSAT54G2844 Cannabis sativa HOM05D002816 ORTHO05D005633 1.4e-26 124.0 112 59.8
DCAR_023760 Daucus carota HOM05D002816 ORTHO05D005633 1.4e-26 124.0 119 56.3
Eucgr.J00810 Eucalyptus grandis HOM05D002816 ORTHO05D005633 1.4e-26 124.0 113 54.0
TAR163G0001 Trochodendron aralioides HOM05D002816 ORTHO05D005633 1.4e-26 124.0 110 53.6
Aqoxy1G00177 Aquilegia oxysepala HOM05D002816 ORTHO05D005633 5.3e-26 122.1 151 48.3
QL01p006152 Quercus lobata HOM05D002816 ORTHO05D005633 6.9e-26 121.7 111 56.8
Potri.003G210600 Populus trichocarpa HOM05D002816 ORTHO05D005633 1.2e-25 120.9 110 55.5
CiPaw.13G165300 Carya illinoinensis HOM05D002816 ORTHO05D005633 1.5e-25 120.6 113 57.5
CSS0039119 Camellia sinensis var. sinensis HOM05D002816 ORTHO05D005633 2.6e-25 119.8 112 57.1
Potri.003G210701 Populus trichocarpa HOM05D002816 ORTHO05D005633 3.4e-25 119.4 110 54.5
Atru.chr3.2513 Acer truncatum HOM05D002816 ORTHO05D005633 2.9e-24 116.3 110 56.4
ECA238G3506 Erigeron canadensis HOM05D002816 ORTHO05D005633 2.9e-24 116.3 112 56.2
MBI04_g14277_MAGBIO Magnolia biondii HOM05D002816 ORTHO05D005633 2.9e-24 116.3 159 46.5
PGR119G0739 Punica granatum HOM05D002816 ORTHO05D005633 2.9e-24 116.3 111 52.3
Hma1.2p1_2304F.1_g319340 Hydrangea macrophylla HOM05D002816 ORTHO05D005633 6.5e-24 115.2 124 50.0
Potri.T085701 Populus trichocarpa HOM05D002816 ORTHO05D005633 6.5e-24 115.2 110 52.7
CSS0015622 Camellia sinensis var. sinensis HOM05D002816 ORTHO05D005633 1.1e-23 114.4 122 50.0
TWI75G1088 Tripterygium wilfordii HOM05D002816 ORTHO05D005633 1.1e-23 114.4 150 44.7
Oeu014059.1 Olea europaea HOM05D002816 ORTHO05D005633 1.4e-23 114.0 164 42.7
Lsat_1_v5_gn_2_101081 Lactuca sativa HOM05D002816 ORTHO05D005633 2.5e-23 113.2 111 55.9
MD03G1020900 Malus domestica HOM05D002816 ORTHO05D005633 2.5e-23 113.2 136 47.1
Duzib150G1626 Durio zibethinus HOM05D002816 ORTHO05D005633 4.2e-23 112.5 106 56.6
PGR119G2184 Punica granatum HOM05D002816 ORTHO05D005633 4.2e-23 112.5 111 51.4
RcHm_v2.0_Chr5g0078141 Rosa chinensis HOM05D002816 ORTHO05D005633 4.2e-23 112.5 161 46.0
Thecc.09G223700 Theobroma cacao HOM05D002816 ORTHO05D005633 9.4e-23 111.3 106 53.8
COL.COLO4_09898 Corchorus olitorius HOM05D002816 ORTHO05D005633 1.2e-22 110.9 190 39.5
Gohir.D05G070300 Gossypium hirsutum HOM05D002816 ORTHO05D005633 1.6e-22 110.5 111 55.0
Sopen01g002630 Solanum pennellii HOM05D002816 ORTHO05D005633 1.6e-22 110.5 110 55.5
PGSC0003DMG400021382 Solanum tuberosum HOM05D002816 ORTHO05D005633 1.6e-22 110.5 110 55.5
CAN.G388.65 Capsicum annuum HOM05D002816 ORTHO05D005633 2.1e-22 110.2 160 43.8
MD11G1022500 Malus domestica HOM05D002816 ORTHO05D005633 2.1e-22 110.2 137 46.7
Nitab4.5_0003796g0070 Nicotiana tabacum HOM05D002816 ORTHO05D005633 2.1e-22 110.2 159 44.0
Prupe.6G018300 Prunus persica HOM05D002816 ORTHO05D005633 2.1e-22 110.2 135 43.7
Solyc01g006640.1 Solanum lycopersicum HOM05D002816 ORTHO05D005633 2.1e-22 110.2 110 54.5
Gohir.A05G067400 Gossypium hirsutum HOM05D002816 ORTHO05D005633 2.7e-22 109.8 111 54.1
FAN25G1910 Fragaria x ananassa HOM05D002816 ORTHO05D005633 6.1e-22 108.6 185 39.5
Gorai.009G071300 Gossypium raimondii HOM05D002816 ORTHO05D005633 6.1e-22 108.6 111 54.1
Cc01_g04160 Coffea canephora HOM05D002816 ORTHO05D005633 1.8e-21 107.1 146 44.5
HanXRQChr07g0196931 Helianthus annuus HOM05D002816 ORTHO05D005633 1.8e-21 107.1 112 51.8
Cpa.g.sc84.106 Carica papaya HOM05D002816 ORTHO05D005633 3.0e-21 106.3 117 44.4
FAN16G1696 Fragaria x ananassa HOM05D002816 ORTHO05D005633 6.7e-21 105.1 185 38.4
FvH4_3g43570 Fragaria vesca HOM05D002816 ORTHO05D005633 8.8e-21 104.8 185 38.9
FAN11G3609 Fragaria x ananassa HOM05D002816 ORTHO05D005633 8.8e-21 104.8 185 38.9
FAN21G1421 Fragaria x ananassa HOM05D002816 ORTHO05D005633 8.8e-21 104.8 185 38.9
MBI04_g27132_MAGBIO Magnolia biondii HOM05D002816 ORTHO05D005633 1.1e-20 104.4 148 43.2
Peaxi162Scf00559g00421 Petunia axillaris HOM05D002816 ORTHO05D005633 1.5e-20 104.0 159 42.1
MBI04_g27134_MAGBIO Magnolia biondii HOM05D002816 ORTHO05D005633 3.3e-20 102.8 126 48.4
Nitab4.5_0009808g0040 Nicotiana tabacum HOM05D002816 ORTHO05D005633 1.7e-19 100.5 176 38.6
vmacro22895 Vaccinium macrocarpon HOM05D002816 ORTHO05D005633 1.7e-19 100.5 110 50.0
Migut.D00561 Erythranthe guttata HOM05D002816 ORTHO05D005633 8.2e-19 98.2 170 41.8
Lju1319A3T41 Lonicera japonica HOM05D002816 ORTHO05D005633 1.1e-18 97.8 109 49.5
Phvul.011G056700 Phaseolus vulgaris HOM05D002816 ORTHO05D005633 1.1e-18 97.8 76 67.1
Migut.N02292 Erythranthe guttata HOM05D002816 ORTHO05D005633 1.8e-18 97.1 146 42.5
ECA233G1587 Erigeron canadensis HOM05D002816 ORTHO05D005633 2.4e-18 96.7 107 46.7
ECA233G2205 Erigeron canadensis HOM05D002816 ORTHO05D005633 5.3e-18 95.5 108 47.2
DCAR_029714 Daucus carota HOM05D002816 ORTHO05D005633 1.2e-17 94.4 109 46.8
Zm00001eb079870 Zea mays HOM05D002816 ORTHO05D005633 1.2e-17 94.4 122 47.5
CAN.G388.66 Capsicum annuum HOM05D002816 ORTHO05D005633 1.6e-17 94.0 110 47.3
Sed0025537 Sechium edule HOM05D002816 ORTHO05D005633 2.0e-17 93.6 149 39.6
Sopen01g002590 Solanum pennellii HOM05D002816 ORTHO05D005633 2.0e-17 93.6 111 46.8
ClCG02G023650 Citrullus lanatus HOM05D002816 ORTHO05D005633 6.5e-16 88.6 106 46.2
Actinidia16293 Actinidia chinensis HOM05D002816 ORTHO05D005633 8.5e-16 88.2 82 57.3
CsaV3_4G023760 Cucumis sativus L. HOM05D002816 ORTHO05D005633 8.5e-16 88.2 106 44.3
Lj1A364T31 Lonicera japonica HOM05D002816 ORTHO05D005633 1.1e-15 87.8 84 54.8
SalBow5G4185 Salvia bowleyana HOM05D002816 ORTHO05D005633 1.9e-15 87.0 104 43.3
ATR0605G130 Amborella trichopoda HOM05D002816 ORTHO05D005633 4.2e-15 85.9 108 46.3
Lsat_1_v5_gn_6_50161 Lactuca sativa HOM05D002816 ORTHO05D005633 5.5e-15 85.5 108 45.4
MELO3C014642.2 Cucumis melo HOM05D002816 ORTHO05D005633 7.2e-15 85.1 106 46.2
HanXRQChr02g0056791 Helianthus annuus HOM05D002816 ORTHO05D005633 7.2e-15 85.1 119 42.0
Actinidia39380 Actinidia chinensis HOM05D002816 ORTHO05D005633 1.6e-14 84.0 68 60.3
Os04g0473900 Oryza sativa ssp. japonica HOM05D002816 ORTHO05D005633 4.7e-14 82.4 111 45.9
Lsat_1_v5_gn_6_50280 Lactuca sativa HOM05D002816 ORTHO05D005633 6.7e-13 78.6 148 35.1
Cc01_g04080 Coffea canephora HOM05D002816 ORTHO05D005633 5.3e-10 68.9 138 37.0
Solyc01g006600.3 Solanum lycopersicum HOM05D002816 ORTHO05D005633 7.0e-10 68.6 64 54.7
Actinidia06322 Actinidia chinensis HOM05D002816 ORTHO05D005633 5.5e-07 58.9 40 72.5
SEGI_08242 Sequoiadendron giganteum HOM05D002816 ORTHO05D005633 3.6e-06 56.2 113 36.3


User provided reference genes

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