Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s4060g0200 Pisum sativum HOM05D006940 ORTHO05D008626 1.0e-54 216.5 108 100.0
TPR.G2024 Trifolium pratense HOM05D006940 ORTHO05D008626 5.7e-37 157.5 84 88.1
Lj1g0019270 Lotus japonicus HOM05D006940 ORTHO05D008626 1.3e-33 146.4 103 73.8
Glyma.18G152800 Glycine max HOM05D006940 ORTHO05D008626 1.4e-32 142.9 106 69.8
TPR.G26809 Trifolium pratense HOM05D006940 ORTHO05D008626 2.5e-32 142.1 106 67.9
Medtr7g052120 Medicago truncatula HOM05D006940 ORTHO05D008626 3.2e-32 141.7 106 70.8
Lalb_Chr21g0315011 Lupinus albus HOM05D006940 ORTHO05D008626 7.2e-32 140.6 106 67.0
Phvul.008G137700 Phaseolus vulgaris HOM05D006940 ORTHO05D008626 1.6e-31 139.4 103 68.9
Glyma.08G345100 Glycine max HOM05D006940 ORTHO05D008626 4.6e-31 137.9 107 69.2
Psat0s1437g0080 Pisum sativum HOM05D006940 ORTHO05D008626 4.6e-31 137.9 107 67.3
arahy.Tifrunner.gnm1.ann1.ZA5GY6 Arachis hypogaea HOM05D006940 ORTHO05D008626 7.4e-29 130.6 112 67.0
Lalb_Chr03g0041181 Lupinus albus HOM05D006940 ORTHO05D008626 1.3e-28 129.8 106 61.3
VMungo0331G0069 Vigna mungo HOM05D006940 ORTHO05D008626 2.2e-28 129.0 104 63.5
Phvul.010G031000 Phaseolus vulgaris HOM05D006940 ORTHO05D008626 9.1e-27 123.6 105 58.1
Thecc.01G212400 Theobroma cacao HOM05D006940 ORTHO05D008626 9.1e-27 123.6 106 59.4
arahy.Tifrunner.gnm1.ann1.7YS827 Arachis hypogaea HOM05D006940 ORTHO05D008626 1.5e-26 122.9 108 66.7
QL09p045850 Quercus lobata HOM05D006940 ORTHO05D008626 1.5e-26 122.9 107 57.9
Duzib138G0498 Durio zibethinus HOM05D006940 ORTHO05D008626 1.0e-25 120.2 100 59.0
Gohir.D07G166700 Gossypium hirsutum HOM05D006940 ORTHO05D008626 2.2e-25 119.0 104 57.7
Duzib133G0939 Durio zibethinus HOM05D006940 ORTHO05D008626 6.5e-25 117.5 102 58.8
Gorai.N003800 Gossypium raimondii HOM05D006940 ORTHO05D008626 6.5e-25 117.5 104 56.7
TWI36G1176 Tripterygium wilfordii HOM05D006940 ORTHO05D008626 1.1e-24 116.7 97 58.8
Gohir.A07G159700 Gossypium hirsutum HOM05D006940 ORTHO05D008626 1.9e-24 115.9 104 56.7
Duzib211G0506 Durio zibethinus HOM05D006940 ORTHO05D008626 3.2e-24 115.2 111 55.9
Gohir.D11G148100 Gossypium hirsutum HOM05D006940 ORTHO05D008626 1.2e-23 113.2 100 56.0
Haze_03308 Corylus avellana HOM05D006940 ORTHO05D008626 2.1e-23 112.5 65 73.8
Gohir.A11G141800 Gossypium hirsutum HOM05D006940 ORTHO05D008626 2.7e-23 112.1 100 55.0
Gorai.007G158800 Gossypium raimondii HOM05D006940 ORTHO05D008626 4.7e-23 111.3 100 56.0
Dinv28817 Davidia involucrata HOM05D006940 ORTHO05D008626 6.1e-23 110.9 105 54.3
Ciclev10033128m.g Citrus clementina HOM05D006940 ORTHO05D008626 7.9e-23 110.5 113 55.8
CSS0001884 Camellia sinensis var. sinensis HOM05D006940 ORTHO05D008626 1.0e-22 110.2 112 54.5
CiPaw.14G043100 Carya illinoinensis HOM05D006940 ORTHO05D008626 1.0e-22 110.2 101 54.5
Manes.13G053500 Manihot esculenta HOM05D006940 ORTHO05D008626 1.0e-22 110.2 82 59.8
Nitab4.5_0000038g0040 Nicotiana tabacum HOM05D006940 ORTHO05D008626 1.0e-22 110.2 107 53.3
RcHm_v2.0_Chr6g0283181 Rosa chinensis HOM05D006940 ORTHO05D008626 1.0e-22 110.2 101 53.5
Eucgr.K02098 Eucalyptus grandis HOM05D006940 ORTHO05D008626 1.4e-22 109.8 106 54.7
Gorai.001G228900 Gossypium raimondii HOM05D006940 ORTHO05D008626 1.4e-22 109.8 108 56.5
Gohir.A07G197033 Gossypium hirsutum HOM05D006940 ORTHO05D008626 1.8e-22 109.4 108 56.5
Gohir.D07G203400 Gossypium hirsutum HOM05D006940 ORTHO05D008626 1.8e-22 109.4 106 56.6
Nitab4.5_0003186g0010 Nicotiana tabacum HOM05D006940 ORTHO05D008626 1.8e-22 109.4 110 51.8
TWI75G1309 Tripterygium wilfordii HOM05D006940 ORTHO05D008626 2.3e-22 109.0 88 60.2
Manes.12G052500 Manihot esculenta HOM05D006940 ORTHO05D008626 3.0e-22 108.6 109 56.0
Nn1g08072 Nelumbo nucifera HOM05D006940 ORTHO05D008626 3.0e-22 108.6 112 51.8
FvH4_2g17950 Fragaria vesca HOM05D006940 ORTHO05D008626 3.9e-22 108.2 99 56.6
FAN15G1530 Fragaria x ananassa HOM05D006940 ORTHO05D008626 3.9e-22 108.2 99 56.6
FAN24G1170 Fragaria x ananassa HOM05D006940 ORTHO05D008626 3.9e-22 108.2 99 56.6
Nn7g37664 Nelumbo nucifera HOM05D006940 ORTHO05D008626 3.9e-22 108.2 70 68.6
Atru.chr6.1604 Acer truncatum HOM05D006940 ORTHO05D008626 6.7e-22 107.5 95 56.8
TAR365G0827 Trochodendron aralioides HOM05D006940 ORTHO05D008626 6.7e-22 107.5 103 55.3
PGR044G1150 Punica granatum HOM05D006940 ORTHO05D008626 1.1e-21 106.7 111 55.9
Solyc08g066610.3 Solanum lycopersicum HOM05D006940 ORTHO05D008626 1.1e-21 106.7 52 82.7
CsaV3_7G026610 Cucumis sativus L. HOM05D006940 ORTHO05D008626 1.5e-21 106.3 96 58.3
Prupe.8G192000 Prunus persica HOM05D006940 ORTHO05D008626 1.5e-21 106.3 109 56.0
Hma1.2p1_0781F.1_g216880 Hydrangea macrophylla HOM05D006940 ORTHO05D008626 2.0e-21 105.9 52 84.6
MD05G1163400 Malus domestica HOM05D006940 ORTHO05D008626 2.0e-21 105.9 95 55.8
Oeu064661.1 Olea europaea HOM05D006940 ORTHO05D008626 2.0e-21 105.9 98 52.0
Sed0013755 Sechium edule HOM05D006940 ORTHO05D008626 2.0e-21 105.9 93 59.1
Sopen08g020450 Solanum pennellii HOM05D006940 ORTHO05D008626 2.0e-21 105.9 102 50.0
PSO017G0530 Papaver somniferum HOM05D006940 ORTHO05D008626 2.6e-21 105.5 95 56.8
Potri.002G249901 Populus trichocarpa HOM05D006940 ORTHO05D008626 3.3e-21 105.1 107 49.5
PGSC0003DMG400007740 Solanum tuberosum HOM05D006940 ORTHO05D008626 3.3e-21 105.1 102 52.0
FAN27G2163 Fragaria x ananassa HOM05D006940 ORTHO05D008626 4.4e-21 104.8 99 55.6
PSO675G0779 Papaver somniferum HOM05D006940 ORTHO05D008626 4.4e-21 104.8 108 55.6
Cpa.g.sc8.85 Carica papaya HOM05D006940 ORTHO05D008626 5.7e-21 104.4 83 57.8
CiPaw.13G054100 Carya illinoinensis HOM05D006940 ORTHO05D008626 5.7e-21 104.4 108 50.9
Lsat_1_v5_gn_9_16040 Lactuca sativa HOM05D006940 ORTHO05D008626 5.7e-21 104.4 91 58.2
MELO3C021111.2 Cucumis melo HOM05D006940 ORTHO05D008626 7.4e-21 104.0 116 56.0
vmacro02811 Vaccinium macrocarpon HOM05D006940 ORTHO05D008626 7.4e-21 104.0 51 84.3
CSS0043498 Camellia sinensis var. sinensis HOM05D006940 ORTHO05D008626 9.7e-21 103.6 107 52.3
Rhsim13G0052100 Rhododendron simsii HOM05D006940 ORTHO05D008626 1.3e-20 103.2 65 69.2
DCAR_012690 Daucus carota HOM05D000328 ORTHO05D008626 1.7e-20 102.8 51 80.4
COL.COLO4_06154 Corchorus olitorius HOM05D006940 ORTHO05D008626 2.2e-20 102.4 64 71.9
Sed0027137 Sechium edule HOM05D006940 ORTHO05D008626 2.2e-20 102.4 110 50.9
MSTRG.18810 Avicennia marina HOM05D006940 ORTHO05D008626 3.7e-20 101.7 49 81.6
Thhalv10026516m.g Eutrema salsugineum HOM05D006940 ORTHO05D008626 3.7e-20 101.7 51 82.4
Sopen09g020450 Solanum pennellii HOM05D006940 ORTHO05D008626 3.7e-20 101.7 103 49.5
HanXRQChr08g0231211 Helianthus annuus HOM05D006940 ORTHO05D008626 4.8e-20 101.3 104 52.9
SalBow6G3514 Salvia bowleyana HOM05D006940 ORTHO05D008626 6.3e-20 100.9 56 73.2
SalBow7G1139 Salvia bowleyana HOM05D006940 ORTHO05D008626 6.3e-20 100.9 51 78.4
MBI07_g41210_MAGBIO Magnolia biondii HOM05D006940 ORTHO05D008626 1.4e-19 99.8 103 52.4
Sabra02G0190300 Salix brachista HOM05D006940 ORTHO05D008626 1.4e-19 99.8 101 50.5
AL9U11560 Arabidopsis lyrata HOM05D006940 ORTHO05D008626 1.8e-19 99.4 95 52.6
BcaB04g17733 Brassica carinata HOM05D006940 ORTHO05D008626 1.8e-19 99.4 50 82.0
A08p07220 Brassica napus HOM05D006940 ORTHO05D008626 1.8e-19 99.4 50 82.0
C08p08940 Brassica napus HOM05D006940 ORTHO05D008626 1.8e-19 99.4 50 82.0
BolC8t47738H Brassica oleracea HOM05D006940 ORTHO05D008626 1.8e-19 99.4 50 82.0
BraA08t32735Z Brassica rapa HOM05D006940 ORTHO05D008626 1.8e-19 99.4 50 82.0
HanXRQChr16g0507861 Helianthus annuus HOM05D006940 ORTHO05D008626 1.8e-19 99.4 96 52.1
MD10G1153200 Malus domestica HOM05D006940 ORTHO05D008626 1.8e-19 99.4 110 49.1
Sp7g09835 Schrenkiella parvula HOM05D006940 ORTHO05D008626 1.8e-19 99.4 50 82.0
Carub.0007s2980 Capsella rubella HOM05D006940 ORTHO05D008626 2.4e-19 99.0 95 51.6
Aa31sc38G90 Aethionema arabicum HOM05D006940 ORTHO05D008626 3.1e-19 98.6 97 53.6
CARHR218280 Cardamine hirsuta HOM05D006940 ORTHO05D008626 3.1e-19 98.6 95 53.7
AT4G12970 Arabidopsis thaliana HOM05D006940 ORTHO05D008626 6.9e-19 97.4 95 51.6
Lsat_1_v5_gn_8_97920 Lactuca sativa HOM05D006940 ORTHO05D008626 6.9e-19 97.4 95 54.7
MSTRG.12756 Avicennia marina HOM05D006940 ORTHO05D008626 1.2e-18 96.7 50 78.0
Zm00001eb143570 Zea mays HOM05D006940 ORTHO05D008626 1.2e-18 96.7 65 60.0
MSTRG.20995 Avicennia marina HOM05D006940 ORTHO05D008626 1.5e-18 96.3 106 46.2
CANSAT01G0416 Cannabis sativa HOM05D006940 ORTHO05D008626 1.5e-18 96.3 49 77.6
CANSAT01G0831 Cannabis sativa HOM05D006940 ORTHO05D008626 1.5e-18 96.3 49 77.6
CANSAT01G1056 Cannabis sativa HOM05D006940 ORTHO05D008626 1.5e-18 96.3 49 77.6
Migut.D02467 Erythranthe guttata HOM05D006940 ORTHO05D008626 1.5e-18 96.3 114 47.4
TAR636G0441 Trochodendron aralioides HOM05D006940 ORTHO05D008626 2.0e-18 95.9 74 60.8
ATR0609G114 Amborella trichopoda HOM05D006940 ORTHO05D008626 7.7e-18 94.0 50 80.0
Sc01g0005680 Simmondsia chinensis HOM05D006940 ORTHO05D008626 7.7e-18 94.0 50 78.0
Zm00001eb364920 Zea mays HOM05D006940 ORTHO05D008626 1.0e-17 93.6 102 48.0
PGSC0003DMG400020111 Solanum tuberosum HOM05D006940 ORTHO05D008626 5.0e-17 91.3 69 60.9
EL10Ac5g11605 Beta vulgaris HOM05D006940 ORTHO05D008626 8.5e-17 90.5 100 47.0
THA.LOC104818992 Tarenaya hassleriana HOM05D006940 ORTHO05D008626 8.5e-17 90.5 102 47.1
Os01g0914400 Oryza sativa ssp. japonica HOM05D006940 ORTHO05D008626 1.4e-16 89.7 65 56.9
GSVIVG01031691001 Vitis vinifera HOM05D006940 ORTHO05D008626 1.4e-16 89.7 46 73.9
SEGI_36325 Sequoiadendron giganteum HOM05D006940 ORTHO05D008626 8.0e-15 84.0 96 50.0
AUR62042875 Chenopodium quinoa HOM05D006940 ORTHO05D008626 5.2e-14 81.3 53 60.4
HPP92_011792 Vanilla planifolia HOM05D006940 ORTHO05D008626 6.7e-14 80.9 62 56.5
Zm00001eb174960 Zea mays HOM05D006940 ORTHO05D008626 2.6e-13 79.0 49 61.2
SMO351G0191 Selaginella moellendorffii HOM05D006940 ORTHO05D008626 2.2e-12 75.9 51 58.8


User provided reference genes

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