Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s3772g0040 Pisum sativum HOM05D005895 ORTHO05D007916 0.0e+00 1113.2 557 100.0
TPR.G34672 Trifolium pratense HOM05D005895 ORTHO05D007916 1.8e-280 968.8 520 91.9
Medtr8g069525 Medicago truncatula HOM05D005895 ORTHO05D007916 3.4e-271 937.9 517 90.3
Ca_22578_v3 Cicer arietinum L. HOM05D005895 ORTHO05D007916 5.5e-269 930.6 523 88.9
VMungo0251G0514 Vigna mungo HOM05D005895 ORTHO05D007916 1.7e-249 865.9 522 83.0
Glyma.08G283100 Glycine max HOM05D005895 ORTHO05D007916 8.5e-246 853.6 521 82.3
Lj4g0008127 Lotus japonicus HOM05D005895 ORTHO05D007916 3.2e-245 851.7 520 82.1
arahy.Tifrunner.gnm1.ann1.0I87EX Arachis hypogaea HOM05D005895 ORTHO05D007916 3.0e-243 845.1 534 80.1
arahy.Tifrunner.gnm1.ann1.LQ91H7 Arachis hypogaea HOM05D005895 ORTHO05D007916 7.5e-242 840.5 522 81.4
Lalb_Chr05g0228401 Lupinus albus HOM05D005895 ORTHO05D007916 3.7e-233 811.6 520 78.7
QL03p058522 Quercus lobata HOM05D005895 ORTHO05D007916 1.3e-225 786.6 520 74.4
CANSAT01G2589 Cannabis sativa HOM05D005895 ORTHO05D007916 1.1e-224 783.5 528 74.4
CSS0018548 Camellia sinensis var. sinensis HOM05D005895 ORTHO05D007916 1.9e-224 782.7 524 74.0
Gohir.A04G136400 Gossypium hirsutum HOM05D005895 ORTHO05D007916 1.2e-223 780.0 524 73.7
MBI10_g00734_MAGBIO Magnolia biondii HOM05D005895 ORTHO05D007916 2.0e-223 779.2 520 73.5
Manes.12G024300 Manihot esculenta HOM05D005895 ORTHO05D007916 4.6e-223 778.1 524 74.0
Cpa.g.sc33.4 Carica papaya HOM05D005895 ORTHO05D007916 6.0e-223 777.7 521 73.7
Actinidia27801 Actinidia chinensis HOM05D005895 ORTHO05D007916 1.7e-222 776.2 524 74.4
COL.COLO4_24246 Corchorus olitorius HOM05D005895 ORTHO05D007916 1.7e-222 776.2 523 73.4
Gohir.D04G179500 Gossypium hirsutum HOM05D005895 ORTHO05D007916 1.7e-222 776.2 524 73.7
Gorai.012G172600 Gossypium raimondii HOM05D005895 ORTHO05D007916 2.3e-222 775.8 524 73.5
MELO3C011963.2 Cucumis melo HOM05D005895 ORTHO05D007916 3.9e-222 775.0 520 73.7
CiPaw.05G183400 Carya illinoinensis HOM05D005895 ORTHO05D007916 8.6e-222 773.9 521 73.3
Haze_12237 Corylus avellana HOM05D005895 ORTHO05D007916 1.1e-221 773.5 520 73.5
Cfa009199 Carpinus fangiana HOM05D005895 ORTHO05D007916 2.5e-221 772.3 520 73.3
Prupe.1G247400 Prunus persica HOM05D005895 ORTHO05D007916 3.3e-221 771.9 523 74.4
Ciclev10030909m.g Citrus clementina HOM05D005895 ORTHO05D007916 2.1e-220 769.2 520 73.7
CsaV3_5G031240 Cucumis sativus L. HOM05D005895 ORTHO05D007916 4.7e-220 768.1 483 77.2
Thecc.02G257400 Theobroma cacao HOM05D005895 ORTHO05D007916 6.2e-220 767.7 525 73.5
PGR119G2505 Punica granatum HOM05D005895 ORTHO05D007916 1.1e-219 766.9 520 74.0
Eucgr.H02516 Eucalyptus grandis HOM05D005895 ORTHO05D007916 1.4e-219 766.5 521 73.1
Atru.chr11.2133 Acer truncatum HOM05D005895 ORTHO05D007916 1.8e-219 766.1 521 73.9
TAR371G0306 Trochodendron aralioides HOM05D005895 ORTHO05D007916 2.3e-219 765.8 520 72.3
Sed0023548 Sechium edule HOM05D005895 ORTHO05D007916 4.0e-219 765.0 520 72.7
GSVIVG01004086001 Vitis vinifera HOM05D005895 ORTHO05D007916 5.2e-219 764.6 527 71.7
Atru.chr11.2117 Acer truncatum HOM05D005895 ORTHO05D007916 1.2e-218 763.5 521 73.5
MD13G1098000 Malus domestica HOM05D005895 ORTHO05D007916 1.2e-218 763.5 528 72.7
Potri.010G044900 Populus trichocarpa HOM05D005895 ORTHO05D007916 1.5e-218 763.1 526 72.1
TWI36G0590 Tripterygium wilfordii HOM05D005895 ORTHO05D007916 4.4e-218 761.5 521 72.9
MD16G1098900 Malus domestica HOM05D005895 ORTHO05D007916 3.2e-216 755.4 528 71.4
RcHm_v2.0_Chr4g0433361 Rosa chinensis HOM05D005895 ORTHO05D007916 4.1e-216 755.0 522 73.2
Manes.13G025800 Manihot esculenta HOM05D005895 ORTHO05D007916 1.6e-215 753.1 472 78.0
Carub.0002s1729 Capsella rubella HOM05D005895 ORTHO05D007916 6.0e-215 751.1 524 71.9
Aa31LG4G10380 Aethionema arabicum HOM05D005895 ORTHO05D007916 7.8e-215 750.7 530 72.1
CARHR063780 Cardamine hirsuta HOM05D005895 ORTHO05D007916 1.0e-214 750.4 522 72.2
Gorai.005G179700 Gossypium raimondii HOM05D005895 ORTHO05D007916 1.0e-214 750.4 520 72.7
AL2G29960 Arabidopsis lyrata HOM05D005895 ORTHO05D007916 3.9e-214 748.4 524 71.6
FvH4_4g25910 Fragaria vesca HOM05D005895 ORTHO05D007916 8.6e-214 747.3 522 73.2
Sp5g25720 Schrenkiella parvula HOM05D005895 ORTHO05D007916 8.6e-214 747.3 524 71.6
Sabra10G0023200 Salix brachista HOM05D005895 ORTHO05D007916 1.5e-213 746.5 495 74.3
THA.LOC104822982 Tarenaya hassleriana HOM05D005895 ORTHO05D007916 1.9e-213 746.1 529 70.9
A02p16660 Brassica napus HOM05D005895 ORTHO05D007916 2.5e-213 745.7 527 70.8
AT1G70570 Arabidopsis thaliana HOM05D005895 ORTHO05D007916 3.3e-213 745.3 531 71.4
BraA02t06722Z Brassica rapa HOM05D005895 ORTHO05D007916 3.3e-213 745.3 528 70.6
BcaB05g24593 Brassica carinata HOM05D005895 ORTHO05D007916 7.3e-213 744.2 524 71.2
SalBow8G2958 Salvia bowleyana HOM05D005895 ORTHO05D007916 1.6e-212 743.0 520 71.3
Solyc04g025540.3 Solanum lycopersicum HOM05D005895 ORTHO05D007916 1.6e-212 743.0 466 76.4
BcaC03g15207 Brassica carinata HOM05D005895 ORTHO05D007916 6.2e-212 741.1 526 70.7
C02p27920 Brassica napus HOM05D005895 ORTHO05D007916 6.2e-212 741.1 526 70.7
BolC2t08837H Brassica oleracea HOM05D005895 ORTHO05D007916 6.2e-212 741.1 526 70.7
CAN.G7.20 Capsicum annuum HOM05D005895 ORTHO05D007916 8.1e-212 740.7 465 76.6
FAN07G1086 Fragaria x ananassa HOM05D005895 ORTHO05D007916 1.8e-211 739.6 523 72.8
Sopen04g012770 Solanum pennellii HOM05D005895 ORTHO05D007916 5.2e-211 738.0 466 75.8
FAN12G1268 Fragaria x ananassa HOM05D005895 ORTHO05D007916 8.9e-211 737.3 522 72.6
Sc04g0009430 Simmondsia chinensis HOM05D005895 ORTHO05D007916 8.9e-211 737.3 527 70.0
FAN12G2739 Fragaria x ananassa HOM05D005895 ORTHO05D007916 2.0e-210 736.1 522 72.4
Lj6A811T72 Lonicera japonica HOM05D005895 ORTHO05D007916 3.4e-210 735.3 522 70.5
vmacro01130 Vaccinium macrocarpon HOM05D005895 ORTHO05D007916 4.4e-210 734.9 561 67.4
Migut.E00194 Erythranthe guttata HOM05D005895 ORTHO05D007916 1.3e-209 733.4 520 71.3
Hund06020 Selenicereus undatus HOM05D005895 ORTHO05D007916 2.2e-209 732.6 532 68.0
Thhalv10018314m.g Eutrema salsugineum HOM05D005895 ORTHO05D007916 2.9e-209 732.3 524 70.6
DCAR_007061 Daucus carota HOM05D005895 ORTHO05D007916 7.1e-208 727.6 523 70.2
AUR62024296 Chenopodium quinoa HOM05D005895 ORTHO05D007916 1.7e-206 723.0 522 70.5
FAN17G0264 Fragaria x ananassa HOM05D005895 ORTHO05D007916 2.3e-206 722.6 557 67.5
EL10Ac6g13787 Beta vulgaris HOM05D005895 ORTHO05D007916 2.5e-205 719.2 525 70.5
Sed0009772 Sechium edule HOM05D005895 ORTHO05D007916 7.3e-205 717.6 448 77.5
PSO017G6602 Papaver somniferum HOM05D005895 ORTHO05D007916 1.2e-204 716.8 526 68.4
Cc04_g11160 Coffea canephora HOM05D005895 ORTHO05D007916 2.1e-204 716.1 476 72.9
Aqoxy5G03807 Aquilegia oxysepala HOM05D005895 ORTHO05D007916 2.8e-204 715.7 505 71.5
PSO478G2260 Papaver somniferum HOM05D005895 ORTHO05D007916 2.8e-204 715.7 525 68.6
AUR62005446 Chenopodium quinoa HOM05D005895 ORTHO05D007916 8.1e-204 714.1 528 68.8
ECA233G5390 Erigeron canadensis HOM05D005895 ORTHO05D007916 1.1e-203 713.8 520 68.3
Phvul.003G063900 Phaseolus vulgaris HOM05D005895 ORTHO05D007916 1.4e-203 713.4 390 87.7
Ah.03g133150 Amaranthus hybridus HOM05D005895 ORTHO05D007916 7.6e-202 707.6 527 68.3
THA.LOC104818151 Tarenaya hassleriana HOM05D005895 ORTHO05D007916 5.4e-200 701.4 499 70.7
HanXRQChr08g0208071 Helianthus annuus HOM05D005895 ORTHO05D007916 1.2e-199 700.3 480 72.1
Gohir.D02G159600 Gossypium hirsutum HOM05D005895 ORTHO05D007916 1.0e-198 697.2 520 69.6
ClCG05G025660 Citrullus lanatus HOM05D005895 ORTHO05D007916 6.6e-198 694.5 488 70.7
FAN22G0931 Fragaria x ananassa HOM05D005895 ORTHO05D007916 7.3e-197 691.0 557 66.4
Nitab4.5_0006332g0030 Nicotiana tabacum HOM05D005895 ORTHO05D007916 7.3e-197 691.0 521 67.6
HPP92_003081 Vanilla planifolia HOM05D005895 ORTHO05D007916 1.4e-195 686.8 519 67.4
Aqoxy3G01161 Aquilegia oxysepala HOM05D005895 ORTHO05D007916 1.2e-191 673.7 484 68.2
Nn4g22655 Nelumbo nucifera HOM05D005895 ORTHO05D007916 1.7e-190 669.8 520 65.6
Zm00001eb231230 Zea mays HOM05D005895 ORTHO05D007916 1.4e-187 660.2 478 69.2
ATR0585G083 Amborella trichopoda HOM05D005895 ORTHO05D007916 3.1e-187 659.1 446 72.6
Os02g0131200 Oryza sativa ssp. japonica HOM05D005895 ORTHO05D007916 1.2e-183 647.1 478 67.6
Lsat_1_v5_gn_8_150700 Lactuca sativa HOM05D005895 ORTHO05D007916 1.6e-183 646.7 476 68.3
Nitab4.5_0000370g0030 Nicotiana tabacum HOM05D005895 ORTHO05D007916 6.0e-183 644.8 520 63.3
Oeu059911.1 Olea europaea HOM05D005895 ORTHO05D007916 4.8e-180 635.2 450 71.1
Peaxi162Scf01242g00143 Petunia axillaris HOM05D005895 ORTHO05D007916 1.3e-177 627.1 382 78.3
MSTRG.2417 Avicennia marina HOM05D005895 ORTHO05D007916 3.8e-177 625.5 372 80.4
Gohir.A03G136300 Gossypium hirsutum HOM05D005895 ORTHO05D007916 3.8e-177 625.5 455 69.0
Mapoly0129s0050 Marchantia polymorpha HOM05D005895 ORTHO05D007916 2.3e-166 589.7 461 64.9
Pp3c12_14340 Physcomitrium patens HOM05D005895 ORTHO05D007916 2.3e-166 589.7 435 67.8
Dinv24803 Davidia involucrata HOM05D005895 ORTHO05D007916 5.3e-163 578.6 388 73.2
Duzib251G0200 Durio zibethinus HOM05D005895 ORTHO05D007916 1.3e-161 573.9 520 58.8
unitig_52.g17177 Utricularia gibba HOM05D005895 ORTHO05D007916 1.9e-160 570.1 474 62.0
AagrBONN_evm.TU.Sc2ySwM_368.1304 Anthoceros agrestis HOM05D005895 ORTHO05D007916 1.3e-156 557.4 433 64.2
SMO119G0060 Selaginella moellendorffii HOM05D005895 ORTHO05D007916 1.0e-153 547.7 433 65.1
Zm00001eb209010 Zea mays HOM05D005895 ORTHO05D007916 1.4e-152 543.9 447 62.0
Pp3c10_19590 Physcomitrium patens HOM05D005895 ORTHO05D007916 7.7e-122 441.8 324 66.0
FAN18G3006 Fragaria x ananassa HOM05D005895 ORTHO05D007916 8.1e-87 325.5 201 77.6
SHI17741 Sapria himalayana HOM05D000002 ORTHO05D000001 3.1e-86 323.6 442 42.3
CBR_g37586 Chara braunii HOM05D000019 ORTHO05D000048 3.0e-65 253.8 274 51.5
SEGI_05407 Sequoiadendron giganteum HOM05D005895 ORTHO05D007916 6.5e-52 209.5 141 71.6
SEGI_24305 Sequoiadendron giganteum HOM05D005895 ORTHO05D007916 1.2e-42 178.7 100 80.0
CBR_g37584 Chara braunii HOM05D000019 ORTHO05D000048 3.8e-28 130.6 136 48.5
DCAR_028023 Daucus carota HOM05D005895 ORTHO05D007916 1.0e-25 122.5 65 87.7
Ah.07g201790 Amaranthus hybridus HOM05D005895 ORTHO05D007916 8.8e-25 119.4 66 80.3
CSS0038190 Camellia sinensis var. sinensis HOM05D033929 ORTHO05D026310 3.5e-21 107.5 144 46.5
Peaxi162Scf02256g00001 Petunia axillaris HOM05D005895 ORTHO05D007916 2.6e-16 91.3 72 61.1
SMO163G0072 Selaginella moellendorffii HOM05D005895 ORTHO05D007916 3.7e-15 87.4 65 64.6
DCAR_029453 Daucus carota HOM05D005895 ORTHO05D007916 1.1e-14 85.9 69 63.8
Gorai.012G172500 Gossypium raimondii HOM05D005895 ORTHO05D007916 1.8e-14 85.1 54 74.1
Actinidia08142 Actinidia chinensis HOM05D005895 ORTHO05D026310 6.8e-09 66.6 72 52.8


User provided reference genes

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