Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s3732g0080 Pisum sativum HOM05D001439 ORTHO05D037370 6.5e-85 317.4 164 100.0
Psat7g201720 Pisum sativum HOM05D001439 ORTHO05D037370 8.0e-35 151.0 90 87.8
Psat7g201640 Pisum sativum HOM05D001439 ORTHO05D037370 8.9e-34 147.5 86 88.4
Psat7g167560 Pisum sativum HOM05D001439 ORTHO05D002726 2.2e-24 116.3 86 73.3
Ca_18919_v3 Cicer arietinum L. HOM05D001439 ORTHO05D002726 8.9e-18 94.4 72 69.4
Medtr4g078860 Medicago truncatula HOM05D001439 ORTHO05D002726 1.3e-16 90.5 72 69.4
Glyma.06G288900 Glycine max HOM05D001439 ORTHO05D002726 2.2e-16 89.7 72 66.7
TPR.G9356 Trifolium pratense HOM05D001439 ORTHO05D002726 2.2e-16 89.7 71 70.4
Lj3g0019816 Lotus japonicus HOM05D001439 ORTHO05D002726 8.4e-16 87.8 72 66.7
arahy.Tifrunner.gnm1.ann1.31J8XM Arachis hypogaea HOM05D001439 ORTHO05D002726 4.2e-15 85.5 79 58.2
arahy.Tifrunner.gnm1.ann1.G6BTL7 Arachis hypogaea HOM05D001439 ORTHO05D002726 4.2e-15 85.5 79 58.2
Cfa014661 Carpinus fangiana HOM05D001439 ORTHO05D002726 9.6e-12 74.3 72 56.9
Haze_13244 Corylus avellana HOM05D001439 ORTHO05D002726 9.6e-12 74.3 72 56.9
Dinv29934 Davidia involucrata HOM05D001439 ORTHO05D002726 3.6e-11 72.4 71 57.7
Thecc.02G186300 Theobroma cacao HOM05D001439 ORTHO05D002726 8.1e-11 71.2 71 57.7
QL08p040227 Quercus lobata HOM05D001439 ORTHO05D002726 1.1e-10 70.9 63 57.1
Duzib132G0536 Durio zibethinus HOM05D001439 ORTHO05D002726 2.4e-10 69.7 70 60.0
CiPaw.03G181600 Carya illinoinensis HOM05D001439 ORTHO05D002726 5.2e-10 68.6 62 56.5
Dinv06859 Davidia involucrata HOM05D001439 ORTHO05D002726 2.0e-09 66.6 72 54.2
Manes.13G141800 Manihot esculenta HOM05D001439 ORTHO05D002726 2.6e-09 66.2 72 51.4
CSS0016347 Camellia sinensis var. sinensis HOM05D001439 ORTHO05D002726 7.6e-09 64.7 71 52.1
CSS0047003 Camellia sinensis var. sinensis HOM05D001439 ORTHO05D002726 7.6e-09 64.7 71 52.1
TAR627G0298 Trochodendron aralioides HOM05D001439 ORTHO05D002726 9.9e-09 64.3 72 52.8
Atru.chr6.2869 Acer truncatum HOM05D001439 ORTHO05D002726 1.3e-08 63.9 67 58.2
Ciclev10014022m.g Citrus clementina HOM05D001439 ORTHO05D002726 1.3e-08 63.9 71 54.9
TWI23G0951 Tripterygium wilfordii HOM05D001439 ORTHO05D002726 1.7e-08 63.5 43 76.7
Cc05_g07750 Coffea canephora HOM05D001439 ORTHO05D002726 2.2e-08 63.2 57 56.1
Rhsim06G0136900 Rhododendron simsii HOM05D001439 ORTHO05D002726 2.2e-08 63.2 70 52.9
RhsimUnG0013600 Rhododendron simsii HOM05D001439 ORTHO05D002726 2.2e-08 63.2 70 52.9
GSVIVG01020605001 Vitis vinifera HOM05D001439 ORTHO05D002726 2.2e-08 63.2 52 65.4
FAN09G0796 Fragaria x ananassa HOM05D001439 ORTHO05D002726 4.9e-08 62.0 71 50.7
FvH4_6g26700 Fragaria vesca HOM05D001439 ORTHO05D002726 6.4e-08 61.6 71 52.1
PSO210G6356 Papaver somniferum HOM05D001439 ORTHO05D002726 6.4e-08 61.6 71 50.7
Eucgr.K01058 Eucalyptus grandis HOM05D001439 ORTHO05D002726 8.4e-08 61.2 70 52.9
FAN02G3093 Fragaria x ananassa HOM05D001439 ORTHO05D002726 8.4e-08 61.2 71 50.7
FAN05G3838 Fragaria x ananassa HOM05D001439 ORTHO05D002726 8.4e-08 61.2 71 50.7
Sabra07G0109800 Salix brachista HOM05D001439 ORTHO05D002726 8.4e-08 61.2 66 53.0
Lj2C292T8 Lonicera japonica HOM05D001439 ORTHO05D002726 1.1e-07 60.8 68 51.5
PSO832G3479 Papaver somniferum HOM05D001439 ORTHO05D002726 1.4e-07 60.5 71 49.3
Sp2g09000 Schrenkiella parvula HOM05D001439 ORTHO05D002726 1.9e-07 60.1 67 52.2
DCAR_021265 Daucus carota HOM05D001439 ORTHO05D002726 2.4e-07 59.7 71 47.9
Dinv17354 Davidia involucrata HOM05D001439 ORTHO05D002726 2.4e-07 59.7 56 55.4
Sabra17G0012700 Salix brachista HOM05D001439 ORTHO05D002726 2.4e-07 59.7 71 49.3
THA.LOC104826040 Tarenaya hassleriana HOM05D001439 ORTHO05D002726 2.4e-07 59.7 43 67.4
A06p47410 Brassica napus HOM05D001439 ORTHO05D002726 3.2e-07 59.3 44 65.9
Sc12g0003230 Simmondsia chinensis HOM05D001439 ORTHO05D002726 3.2e-07 59.3 46 67.4
Actinidia26141 Actinidia chinensis HOM05D001439 ORTHO05D002726 4.2e-07 58.9 44 70.5
BcaC06g31644 Brassica carinata HOM05D001439 ORTHO05D002726 4.2e-07 58.9 67 55.2
Gohir.D06G209600 Gossypium hirsutum HOM05D001439 ORTHO05D002726 4.2e-07 58.9 70 52.9
Gorai.010G256900 Gossypium raimondii HOM05D001439 ORTHO05D002726 4.2e-07 58.9 70 52.9
THA.LOC104801160 Tarenaya hassleriana HOM05D001439 ORTHO05D002726 4.2e-07 58.9 42 71.4
C07p26860 Brassica napus HOM05D001439 ORTHO05D002726 5.4e-07 58.5 76 44.7
ClCG01G023260 Citrullus lanatus HOM05D001439 ORTHO05D002726 5.4e-07 58.5 44 68.2
MELO3C007260.2 Cucumis melo HOM05D001439 ORTHO05D002726 5.4e-07 58.5 44 68.2
CsaV3_6G050410 Cucumis sativus L. HOM05D001439 ORTHO05D002726 5.4e-07 58.5 44 68.2
Nn1g04237 Nelumbo nucifera HOM05D001439 ORTHO05D002726 5.4e-07 58.5 72 52.8
Sed0000156 Sechium edule HOM05D001439 ORTHO05D002726 5.4e-07 58.5 45 66.7
AL8G15840 Arabidopsis lyrata HOM05D001439 ORTHO05D002726 7.1e-07 58.2 44 65.9
BraA06t27612Z Brassica rapa HOM05D001439 ORTHO05D002726 7.1e-07 58.2 64 50.0
Gohir.A06G211600 Gossypium hirsutum HOM05D001439 ORTHO05D002726 7.1e-07 58.2 70 52.9
Lsat_1_v5_gn_7_22781 Lactuca sativa HOM05D001439 ORTHO05D002726 7.1e-07 58.2 43 67.4
Oeu056520.3 Olea europaea HOM05D001439 ORTHO05D002726 7.1e-07 58.2 44 70.5
TWI14G1311 Tripterygium wilfordii HOM05D001439 ORTHO05D002726 7.1e-07 58.2 43 69.8
Actinidia07602 Actinidia chinensis HOM05D001439 ORTHO05D002726 9.3e-07 57.8 44 70.5
Duzib235G0176 Durio zibethinus HOM05D001439 ORTHO05D002726 9.3e-07 57.8 62 54.8
HanXRQChr15g0469531 Helianthus annuus HOM05D001439 ORTHO05D002726 9.3e-07 57.8 45 66.7
TAR626G0101 Trochodendron aralioides HOM05D001439 ORTHO05D002726 9.3e-07 57.8 71 50.7
Carub.0008s0434 Capsella rubella HOM05D001439 ORTHO05D002726 1.2e-06 57.4 44 65.9
CARHR179080 Cardamine hirsuta HOM05D001439 ORTHO05D002726 1.2e-06 57.4 44 63.6
Thhalv10003131m.g Eutrema salsugineum HOM05D001439 ORTHO05D002726 1.2e-06 57.4 57 56.1
Gohir.A12G139300 Gossypium hirsutum HOM05D001439 ORTHO05D002726 1.2e-06 57.4 57 56.1
Potri.007G135500 Populus trichocarpa HOM05D001439 ORTHO05D002726 1.2e-06 57.4 65 49.2
Potri.017G016200 Populus trichocarpa HOM05D001439 ORTHO05D002726 1.2e-06 57.4 71 46.5
AT5G44180 Arabidopsis thaliana HOM05D001439 ORTHO05D002726 1.6e-06 57.0 43 67.4
CiPaw.09G063400 Carya illinoinensis HOM05D001439 ORTHO05D002726 1.6e-06 57.0 72 51.4
Gorai.008G155100 Gossypium raimondii HOM05D001439 ORTHO05D002726 1.6e-06 57.0 57 56.1
Peaxi162Scf00926g00006 Petunia axillaris HOM05D001439 ORTHO05D002726 1.6e-06 57.0 45 60.0
Potri.011G057700 Populus trichocarpa HOM05D001439 ORTHO05D002726 1.6e-06 57.0 58 55.2
MSTRG.14322 Avicennia marina HOM05D001439 ORTHO05D002726 2.1e-06 56.6 43 67.4
CSS0043150 Camellia sinensis var. sinensis HOM05D001439 ORTHO05D002726 2.1e-06 56.6 45 64.4
Ciclev10015005m.g Citrus clementina HOM05D001439 ORTHO05D002726 2.1e-06 56.6 74 52.7
ECA236G3003 Erigeron canadensis HOM05D001455 ORTHO05D001587 2.1e-06 56.6 42 66.7
FvH4_3g08620 Fragaria vesca HOM05D001439 ORTHO05D002726 2.1e-06 56.6 57 54.4
FAN11G1486 Fragaria x ananassa HOM05D001439 ORTHO05D002726 2.1e-06 56.6 57 54.4
Oeu016007.1 Olea europaea HOM05D001439 ORTHO05D002726 2.1e-06 56.6 62 53.2
RcHm_v2.0_Chr2g0127091 Rosa chinensis HOM05D001439 ORTHO05D002726 2.1e-06 56.6 72 52.8
BcaC06g34584 Brassica carinata HOM05D001439 ORTHO05D002726 2.7e-06 56.2 76 43.4
BolC7t43215H Brassica oleracea HOM05D001439 ORTHO05D002726 2.7e-06 56.2 76 43.4
Migut.M01107 Erythranthe guttata HOM05D001439 ORTHO05D002726 2.7e-06 56.2 45 62.2
Hma1.2p1_0558F.1_g178470 Hydrangea macrophylla HOM05D001439 ORTHO05D002726 2.7e-06 56.2 44 61.4
Lj6g0010323 Lotus japonicus HOM05D001439 ORTHO05D002726 2.7e-06 56.2 42 66.7
arahy.Tifrunner.gnm1.ann1.1H2VR5 Arachis hypogaea HOM05D001439 ORTHO05D002726 3.5e-06 55.8 74 45.9
EL10Ac9g20819 Beta vulgaris HOM05D001439 ORTHO05D002726 3.5e-06 55.8 65 47.7
Cc02_g13850 Coffea canephora HOM05D001439 ORTHO05D002726 3.5e-06 55.8 72 44.4
FAN14G5737 Fragaria x ananassa HOM05D001439 ORTHO05D002726 3.5e-06 55.8 67 49.3
Phvul.002G232200 Phaseolus vulgaris HOM05D001439 ORTHO05D002726 3.5e-06 55.8 69 43.5
SGA_v2.0_scaffold34G13921 Striga asiatica HOM05D001439 ORTHO05D002726 3.5e-06 55.8 61 55.7
Thecc.06G181000 Theobroma cacao HOM05D001439 ORTHO05D002726 3.5e-06 55.8 70 50.0
vmacro15932 Vaccinium macrocarpon HOM05D001439 ORTHO05D002726 3.5e-06 55.8 57 54.4
CANSAT35G2047 Cannabis sativa HOM05D001439 ORTHO05D002726 4.6e-06 55.5 68 47.1
CDE10G0226 Ceratophyllum demersum HOM05D001439 ORTHO05D002726 4.6e-06 55.5 43 60.5
HanXRQChr04g0117141 Helianthus annuus HOM05D001439 ORTHO05D002726 4.6e-06 55.5 69 46.4
Nitab4.5_0000621g0070 Nicotiana tabacum HOM05D001439 ORTHO05D002726 4.6e-06 55.5 71 49.3
QL05p042276 Quercus lobata HOM05D001439 ORTHO05D002726 4.6e-06 55.5 72 48.6
RcHm_v2.0_Chr5g0009221 Rosa chinensis HOM05D001439 ORTHO05D002726 4.6e-06 55.5 54 55.6
Sabra11G0039900 Salix brachista HOM05D001439 ORTHO05D002726 4.6e-06 55.5 58 56.9
Duzib160G0499 Durio zibethinus HOM05D001439 ORTHO05D002726 6.0e-06 55.1 70 50.0
FAN16G2831 Fragaria x ananassa HOM05D001439 ORTHO05D002726 6.0e-06 55.1 54 53.7
Glyma.13G175200 Glycine max HOM05D001439 ORTHO05D002726 6.0e-06 55.1 69 44.9
Gohir.A06G211700 Gossypium hirsutum HOM05D001439 ORTHO05D002726 6.0e-06 55.1 45 62.2
Gohir.D06G209500 Gossypium hirsutum HOM05D001439 ORTHO05D002726 6.0e-06 55.1 45 62.2
Gorai.010G243500 Gossypium raimondii HOM05D001439 ORTHO05D002726 6.0e-06 55.1 45 62.2
Sabra04G0030600 Salix brachista HOM05D001439 ORTHO05D002726 6.0e-06 55.1 58 53.4
GSVIVG01021113001 Vitis vinifera HOM05D001439 ORTHO05D002726 6.0e-06 55.1 69 47.8
Haze_06382 Corylus avellana HOM05D001439 ORTHO05D002726 7.8e-06 54.7 73 49.3
Lj1C693T4 Lonicera japonica HOM05D001439 ORTHO05D002726 7.8e-06 54.7 42 66.7
Lj1C697G7 Lonicera japonica HOM05D001439 ORTHO05D002726 7.8e-06 54.7 42 66.7
Lalb_Chr16g0384011 Lupinus albus HOM05D001439 ORTHO05D002726 7.8e-06 54.7 71 50.7
Manes.17G049300 Manihot esculenta HOM05D001439 ORTHO05D002726 7.8e-06 54.7 57 56.1


User provided reference genes

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