Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s3397g0040 Pisum sativum HOM05D001749 ORTHO05D001632 8.4e-112 407.1 221 100.0
Medtr3g117050 Medicago truncatula HOM05D001749 ORTHO05D001632 2.6e-73 279.3 260 63.5
TPR.G32205 Trifolium pratense HOM05D001749 ORTHO05D001632 2.1e-70 269.6 260 61.9
Ca_15357_v3 Cicer arietinum L. HOM05D001749 ORTHO05D001632 5.3e-58 228.4 265 54.7
Lj1g0015330 Lotus japonicus HOM05D001749 ORTHO05D001632 2.4e-42 176.4 262 48.1
Phvul.009G022300 Phaseolus vulgaris HOM05D001749 ORTHO05D001632 1.6e-25 120.6 251 40.2
Glyma.06G010900 Glycine max HOM05D001749 ORTHO05D001632 6.0e-25 118.6 256 37.9
Lalb_Chr11g0061321 Lupinus albus HOM05D001749 ORTHO05D001632 6.0e-25 118.6 277 35.7
arahy.Tifrunner.gnm1.ann1.39NQDQ Arachis hypogaea HOM05D001749 ORTHO05D001632 5.0e-24 115.5 292 35.6
VMungo1309G2481 Vigna mungo HOM05D001749 ORTHO05D001632 1.5e-23 114.0 239 38.9
arahy.Tifrunner.gnm1.ann1.HXWY1L Arachis hypogaea HOM05D001749 ORTHO05D001632 2.5e-23 113.2 297 34.3
Glyma.04G011000 Glycine max HOM05D001749 ORTHO05D001632 5.2e-21 105.5 245 37.6
arahy.Tifrunner.gnm1.ann1.RJ9RH5 Arachis hypogaea HOM05D001749 ORTHO05D001632 1.5e-20 104.0 259 38.6
Medtr4g070660 Medicago truncatula HOM05D001749 ORTHO05D001632 5.8e-20 102.1 236 36.0
TPR.G30499 Trifolium pratense HOM05D001749 ORTHO05D001632 1.4e-18 97.4 227 39.2
arahy.Tifrunner.gnm1.ann1.BPXV57 Arachis hypogaea HOM05D001749 ORTHO05D001632 3.2e-18 96.3 299 31.4
Glyma.11G115300 Glycine max HOM05D001749 ORTHO05D001632 1.0e-16 91.3 231 35.5
ClCG11G004240 Citrullus lanatus HOM05D001749 ORTHO05D001632 1.3e-16 90.9 257 34.2
Glyma.12G041200 Glycine max HOM05D001749 ORTHO05D001632 6.6e-16 88.6 232 34.5
MELO3C023313.2 Cucumis melo HOM05D001749 ORTHO05D001632 4.3e-15 85.9 234 33.3
Medtr4g070640 Medicago truncatula HOM05D001749 ORTHO05D001632 4.3e-15 85.9 215 36.7
COL.COLO4_25968 Corchorus olitorius HOM05D001749 ORTHO05D001632 7.3e-15 85.1 225 36.9
Phvul.009G022400 Phaseolus vulgaris HOM05D001749 ORTHO05D001632 9.5e-15 84.7 161 41.0
MD05G1064000 Malus domestica HOM05D001749 ORTHO05D001632 3.6e-14 82.8 253 34.8
MD10G1072700 Malus domestica HOM05D001749 ORTHO05D001632 3.6e-14 82.8 257 32.3
Duzib132G0910 Durio zibethinus HOM05D001749 ORTHO05D001632 1.4e-13 80.9 225 36.0
Thecc.02G082100 Theobroma cacao HOM05D001749 ORTHO05D001632 1.8e-13 80.5 243 35.4
VMungo0251G1135 Vigna mungo HOM05D001749 ORTHO05D001632 1.8e-13 80.5 223 34.1
Cfa005037 Carpinus fangiana HOM05D001749 ORTHO05D001632 3.1e-13 79.7 226 34.5
Ciclev10029211m.g Citrus clementina HOM05D001749 ORTHO05D001632 4.0e-13 79.3 239 33.5
QL11p044367 Quercus lobata HOM05D001749 ORTHO05D001632 4.0e-13 79.3 214 36.0
CANSAT11G0884 Cannabis sativa HOM05D001749 ORTHO05D001632 5.2e-13 79.0 256 30.9
CsaV3_2G014930 Cucumis sativus L. HOM05D001749 ORTHO05D001632 5.2e-13 79.0 232 34.5
Cc02_g17320 Coffea canephora HOM05D001749 ORTHO05D001632 6.8e-13 78.6 242 33.5
Duzib248G0723 Durio zibethinus HOM05D001749 ORTHO05D001632 8.9e-13 78.2 220 33.6
RcHm_v2.0_Chr6g0265051 Rosa chinensis HOM05D001749 ORTHO05D001632 2.6e-12 76.6 237 36.7
Haze_02350 Corylus avellana HOM05D001749 ORTHO05D001632 5.8e-12 75.5 226 35.8
Eucgr.I01283 Eucalyptus grandis HOM05D001749 ORTHO05D001632 5.8e-12 75.5 232 31.9
FvH4_2g09200 Fragaria vesca HOM05D001749 ORTHO05D001632 9.9e-12 74.7 258 33.3
FAN15G1825 Fragaria x ananassa HOM05D001749 ORTHO05D001632 9.9e-12 74.7 258 33.3
Phvul.011G043200 Phaseolus vulgaris HOM05D001749 ORTHO05D001632 9.9e-12 74.7 225 29.8
FAN24G3069 Fragaria x ananassa HOM05D001749 ORTHO05D001632 1.3e-11 74.3 258 33.3
Manes.11G085200 Manihot esculenta HOM05D001749 ORTHO05D001632 1.7e-11 73.9 258 32.2
Cfa005035 Carpinus fangiana HOM05D001749 ORTHO05D001632 2.9e-11 73.2 235 33.6
Psat7g183480 Pisum sativum HOM05D001749 ORTHO05D001632 3.8e-11 72.8 212 34.9
Sed0016213 Sechium edule HOM05D001749 ORTHO05D001632 1.1e-10 71.2 278 28.1
Dinv23498 Davidia involucrata HOM05D001749 ORTHO05D001632 1.4e-10 70.9 229 29.3
Duzib052G0040 Durio zibethinus HOM05D001749 ORTHO05D001632 3.2e-10 69.7 243 30.5
TWI79G0729 Tripterygium wilfordii HOM05D001749 ORTHO05D001632 3.2e-10 69.7 237 30.0
Gohir.D13G031200 Gossypium hirsutum HOM05D001749 ORTHO05D001632 5.4e-10 68.9 225 34.2
FAN27G1258 Fragaria x ananassa HOM05D001749 ORTHO05D001632 7.1e-10 68.6 241 33.6
Manes.04G074762 Manihot esculenta HOM05D001749 ORTHO05D001632 9.2e-10 68.2 256 31.2
Sopen01g051990 Solanum pennellii HOM05D001749 ORTHO05D001632 9.2e-10 68.2 226 31.0
Gorai.013G035600 Gossypium raimondii HOM05D001749 ORTHO05D001632 1.2e-09 67.8 225 33.8
Haze_02351 Corylus avellana HOM05D001749 ORTHO05D001632 2.1e-09 67.0 233 33.0
Haze_02352 Corylus avellana HOM05D001749 ORTHO05D001632 2.1e-09 67.0 233 33.0
Potri.004G157300 Populus trichocarpa HOM05D001749 ORTHO05D001632 4.6e-09 65.9 253 29.2
Atru.chr5.3055 Acer truncatum HOM05D001749 ORTHO05D001632 7.8e-09 65.1 236 32.2
Cpa.g.sc106.17 Carica papaya HOM05D001749 ORTHO05D001632 1.7e-08 63.9 260 30.4
Gohir.A13G033300 Gossypium hirsutum HOM05D001749 ORTHO05D001632 1.7e-08 63.9 225 33.3
TWI79G0604 Tripterygium wilfordii HOM05D001749 ORTHO05D001632 1.7e-08 63.9 222 28.8
CiPaw.06G133900 Carya illinoinensis HOM05D001749 ORTHO05D001632 3.0e-08 63.2 225 32.0
THA.LOC104807305 Tarenaya hassleriana HOM05D001749 ORTHO05D001632 3.0e-08 63.2 233 30.0
Potri.009G119000 Populus trichocarpa HOM05D001749 ORTHO05D001632 5.1e-08 62.4 228 32.5
Prupe.8G094100 Prunus persica HOM05D001749 ORTHO05D001632 5.1e-08 62.4 225 32.0
CiPaw.06G133800 Carya illinoinensis HOM05D001749 ORTHO05D001632 8.6e-08 61.6 226 31.9
Lj3g0014272 Lotus japonicus HOM05D001749 ORTHO05D001632 8.6e-08 61.6 344 25.3
Ca_20902_v3 Cicer arietinum L. HOM05D001749 ORTHO05D001632 1.1e-07 61.2 193 35.2
Lalb_Chr01g0002391 Lupinus albus HOM05D001749 ORTHO05D001632 1.5e-07 60.8 84 47.6
TAR625G0803 Trochodendron aralioides HOM05D001749 ORTHO05D001632 3.3e-07 59.7 225 30.7
GSVIVG01018920001 Vitis vinifera HOM05D001749 ORTHO05D001632 3.3e-07 59.7 215 30.7
Gohir.A03G196000 Gossypium hirsutum HOM05D001749 ORTHO05D001632 4.3e-07 59.3 218 30.7
Nn1g04912 Nelumbo nucifera HOM05D001749 ORTHO05D001632 4.3e-07 59.3 244 27.9
Oeu041631.1 Olea europaea HOM05D001749 ORTHO05D001632 5.6e-07 58.9 212 30.7
PGR142G0388 Punica granatum HOM05D001749 ORTHO05D001632 5.6e-07 58.9 231 32.0
PGSC0003DMG400000715 Solanum tuberosum HOM05D001749 ORTHO05D001632 5.6e-07 58.9 227 31.3
EL10Ac9g21701 Beta vulgaris HOM05D001749 ORTHO05D001632 9.6e-07 58.2 229 29.7
Sabra09G0091300 Salix brachista HOM05D001749 ORTHO05D001632 9.6e-07 58.2 213 30.5
Migut.N01252 Erythranthe guttata HOM05D001749 ORTHO05D001632 1.2e-06 57.8 215 29.3
CiPaw.05G066900 Carya illinoinensis HOM05D001749 ORTHO05D001632 2.8e-06 56.6 230 32.2
Oeu061220.1 Olea europaea HOM05D001749 ORTHO05D001632 3.6e-06 56.2 225 31.6
TWI31G0051 Tripterygium wilfordii HOM05D001749 ORTHO05D001632 3.6e-06 56.2 232 29.7
Thhalv10004766m.g Eutrema salsugineum HOM05D001749 ORTHO05D001632 4.7e-06 55.8 261 25.7
Nitab4.5_0018301g0010 Nicotiana tabacum HOM05D001749 ORTHO05D001632 4.7e-06 55.8 246 27.6
CARHR242840 Cardamine hirsuta HOM05D001749 ORTHO05D001632 6.2e-06 55.5 229 28.8
Gorai.005G245100 Gossypium raimondii HOM05D001749 ORTHO05D001632 6.2e-06 55.5 215 30.7
Sabra04G0105300 Salix brachista HOM05D001749 ORTHO05D001632 6.2e-06 55.5 242 28.9
TAR381G0807 Trochodendron aralioides HOM05D001749 ORTHO05D001632 6.2e-06 55.5 229 28.8
PGSC0003DMG400000718 Solanum tuberosum HOM05D001749 ORTHO05D001632 8.1e-06 55.1 225 28.0


User provided reference genes

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