Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s3339g0160 Pisum sativum HOM05D008392 ORTHO05D010441 1.7e-73 279.3 140 100.0
Psat6g152960 Pisum sativum HOM05D008392 ORTHO05D010441 1.8e-43 179.5 144 65.3
Psat6g152920 Pisum sativum HOM05D008392 ORTHO05D010441 3.4e-42 175.3 146 65.1
Lalb_Chr06g0167451 Lupinus albus HOM05D008392 ORTHO05D010441 6.9e-35 151.0 124 59.7
Medtr5g095070 Medicago truncatula HOM05D008392 ORTHO05D010441 6.9e-35 151.0 134 61.2
Ca_10178_v3 Cicer arietinum L. HOM05D008392 ORTHO05D010441 3.2e-32 142.1 101 68.3
Glyma.20G096200 Glycine max HOM05D008392 ORTHO05D010441 6.7e-30 134.4 147 49.7
Glyma.10G146432 Glycine max HOM05D008392 ORTHO05D010441 1.5e-29 133.3 103 63.1
Lalb_Chr19g0129211 Lupinus albus HOM05D008392 ORTHO05D010441 2.8e-28 129.0 96 62.5
Medtr5g080030 Medicago truncatula HOM05D008392 ORTHO05D010441 5.3e-27 124.8 139 51.8
Phvul.007G202100 Phaseolus vulgaris HOM05D008392 ORTHO05D010441 9.0e-27 124.0 132 50.8
arahy.Tifrunner.gnm1.ann1.DRX87E Arachis hypogaea HOM05D008392 ORTHO05D010441 1.2e-26 123.6 89 65.2
arahy.Tifrunner.gnm1.ann1.S3TC9P Arachis hypogaea HOM05D008392 ORTHO05D010441 1.2e-26 123.6 89 65.2
VMungo0720G2188 Vigna mungo HOM05D008392 ORTHO05D010441 9.9e-26 120.6 132 50.0
Lj5g0025247 Lotus japonicus HOM05D008392 ORTHO05D010441 1.3e-25 120.2 98 63.3
Lj1g0008102 Lotus japonicus HOM05D008392 ORTHO05D010441 6.4e-25 117.9 97 62.9
Prupe.6G312100 Prunus persica HOM05D008392 ORTHO05D010441 5.6e-21 104.8 119 45.4
CANSAT54G2036 Cannabis sativa HOM05D008392 ORTHO05D010441 2.1e-20 102.8 92 54.3
Dinv24467 Davidia involucrata HOM05D008392 ORTHO05D010441 8.1e-20 100.9 131 41.2
Peaxi162Scf01061g00127 Petunia axillaris HOM05D008392 ORTHO05D010441 1.1e-19 100.5 93 51.6
Actinidia35516 Actinidia chinensis HOM05D008392 ORTHO05D010441 1.8e-19 99.8 121 43.0
DCAR_005422 Daucus carota HOM05D008392 ORTHO05D010441 2.0e-18 96.3 106 45.3
MD12G1204900 Malus domestica HOM05D008392 ORTHO05D010441 2.0e-18 96.3 126 42.1
Solyc01g100620.3 Solanum lycopersicum HOM05D008392 ORTHO05D010441 5.8e-18 94.7 101 44.6
Sopen01g044120 Solanum pennellii HOM05D008392 ORTHO05D010441 5.8e-18 94.7 101 44.6
MD12G1205000 Malus domestica HOM05D008392 ORTHO05D010441 7.6e-18 94.4 110 45.5
TAR362G1147 Trochodendron aralioides HOM05D001261 ORTHO05D010441 7.6e-18 94.4 95 51.6
FAN05G3611 Fragaria x ananassa HOM05D008392 ORTHO05D010441 1.0e-17 94.0 114 43.9
CAN.G1076.23 Capsicum annuum HOM05D008392 ORTHO05D010441 1.3e-17 93.6 121 42.1
FAN14G5205 Fragaria x ananassa HOM05D001457 ORTHO05D010441 2.9e-17 92.4 114 43.0
RcHm_v2.0_Chr3g0457251 Rosa chinensis HOM05D008392 ORTHO05D010441 2.9e-17 92.4 114 43.0
FvH4_6g07580 Fragaria vesca HOM05D008392 ORTHO05D010441 3.8e-17 92.0 114 43.0
DCAR_025288 Daucus carota HOM05D008392 ORTHO05D010441 1.4e-16 90.1 89 48.3
FAN02G4301 Fragaria x ananassa HOM05D001457 ORTHO05D010441 7.1e-16 87.8 112 41.1
Lsat_1_v5_gn_5_40160 Lactuca sativa HOM05D008392 ORTHO05D010441 1.6e-15 86.7 106 43.4
QL03p014198 Quercus lobata HOM05D008392 ORTHO05D010441 1.6e-15 86.7 139 38.8
Cc02_g35180 Coffea canephora HOM05D008392 ORTHO05D010441 3.5e-15 85.5 90 47.8
TPR.G2592 Trifolium pratense HOM05D008392 ORTHO05D010441 4.6e-15 85.1 107 51.4
MD04G1192900 Malus domestica HOM05D008392 ORTHO05D010441 1.3e-14 83.6 110 42.7
TPR.G8444 Trifolium pratense HOM05D008392 ORTHO05D010441 3.7e-12 75.5 49 75.5
SalBow7G4279 Salvia bowleyana HOM05D008392 ORTHO05D010441 1.8e-11 73.2 105 37.1
Aqoxy2G02705 Aquilegia oxysepala HOM05D001261 ORTHO05D010441 1.3e-09 67.0 92 41.3
SGA_v2.0_scaffold4G01973 Striga asiatica HOM05D008392 ORTHO05D010441 1.3e-09 67.0 106 37.7
Nn5g30235 Nelumbo nucifera HOM05D001261 ORTHO05D010441 1.4e-08 63.5 104 36.5
AUR62013853 Chenopodium quinoa HOM05D001261 ORTHO05D001130 3.2e-08 62.4 107 32.7
Hund22972 Selenicereus undatus HOM05D001261 ORTHO05D001130 7.2e-08 61.2 135 31.9
Oeu053741.2 Olea europaea HOM05D008392 ORTHO05D010441 1.2e-07 60.5 69 43.5
AUR62036749 Chenopodium quinoa HOM05D001261 ORTHO05D001130 1.6e-07 60.1 118 29.7
A06p00070 Brassica napus HOM05D001261 ORTHO05D001130 2.7e-07 59.3 121 32.2
BraA06t23222Z Brassica rapa HOM05D001261 ORTHO05D001130 2.7e-07 59.3 121 32.2
Dinv39562 Davidia involucrata HOM05D001261 ORTHO05D001130 2.7e-07 59.3 65 41.5
CSS0050103 Camellia sinensis var. sinensis HOM05D001261 ORTHO05D001130 3.6e-07 58.9 74 33.8
ECA246G1668 Erigeron canadensis HOM05D005510 ORTHO05D006750 3.6e-07 58.9 72 38.9
Migut.C00909 Erythranthe guttata HOM05D001261 ORTHO05D001130 3.6e-07 58.9 97 30.9
FAN21G2040 Fragaria x ananassa HOM05D001261 ORTHO05D001130 4.6e-07 58.5 103 29.1
Rhsim04G0007700 Rhododendron simsii HOM05D001261 ORTHO05D001130 7.9e-07 57.8 100 31.0
Cpa.g.sc12.68 Carica papaya HOM05D001261 ORTHO05D001130 1.0e-06 57.4 102 30.4
FAN16G2494 Fragaria x ananassa HOM05D001261 ORTHO05D001130 1.0e-06 57.4 103 29.1
ATR0693G224 Amborella trichopoda HOM05D001261 ORTHO05D001130 1.3e-06 57.0 85 37.6
FvH4_3g41610 Fragaria vesca HOM05D001261 ORTHO05D001130 1.3e-06 57.0 103 29.1
FAN11G1862 Fragaria x ananassa HOM05D001261 ORTHO05D001130 1.3e-06 57.0 103 29.1
Aa31LG10G570 Aethionema arabicum HOM05D001261 ORTHO05D001130 1.8e-06 56.6 125 29.6
FAN25G3495 Fragaria x ananassa HOM05D001261 ORTHO05D001130 1.8e-06 56.6 103 27.2
Pp3c1_33100 Physcomitrium patens HOM05D001261 ORTHO05D001130 2.3e-06 56.2 109 30.3
THA.LOC104810304 Tarenaya hassleriana HOM05D001261 ORTHO05D001130 2.3e-06 56.2 105 31.4
DCAR_013758 Daucus carota HOM05D001261 ORTHO05D001130 3.0e-06 55.8 133 28.6
CDE08G0491 Ceratophyllum demersum HOM05D008392 ORTHO05D010441 3.9e-06 55.5 89 38.2
Duzib268G0395 Durio zibethinus HOM05D001261 ORTHO05D001130 3.9e-06 55.5 103 29.1
Ah.13g073330 Amaranthus hybridus HOM05D001261 ORTHO05D001130 5.1e-06 55.1 75 33.3
AUR62023759 Chenopodium quinoa HOM05D001261 ORTHO05D001130 5.1e-06 55.1 109 33.0
QL08p000529 Quercus lobata HOM05D001261 ORTHO05D001130 5.1e-06 55.1 92 28.3
HPP92_009907 Vanilla planifolia HOM05D001261 ORTHO05D001130 5.1e-06 55.1 133 29.3
Cfa014019 Carpinus fangiana HOM05D001261 ORTHO05D001130 6.7e-06 54.7 82 31.7
Cc10_g01010 Coffea canephora HOM05D001261 ORTHO05D001130 6.7e-06 54.7 66 39.4
Haze_22726 Corylus avellana HOM05D001261 ORTHO05D001130 6.7e-06 54.7 82 31.7
Dinv03680 Davidia involucrata HOM05D001261 ORTHO05D001130 6.7e-06 54.7 65 40.0
Lj3g0005977 Lotus japonicus HOM05D001261 ORTHO05D001130 6.7e-06 54.7 71 31.0
MBI08_g40331_MAGBIO Magnolia biondii HOM05D001261 ORTHO05D001130 6.7e-06 54.7 73 34.2
Nitab4.5_0002216g0010 Nicotiana tabacum HOM05D001261 ORTHO05D001130 6.7e-06 54.7 68 32.4
PSO170G1184 Papaver somniferum HOM05D001261 ORTHO05D001130 6.7e-06 54.7 117 29.1
Rhsim06G0010600 Rhododendron simsii HOM05D001261 ORTHO05D001130 6.7e-06 54.7 95 30.5
Actinidia03674 Actinidia chinensis HOM05D001261 ORTHO05D001130 8.7e-06 54.3 88 30.7
Actinidia17023 Actinidia chinensis HOM05D001261 ORTHO05D001130 8.7e-06 54.3 79 32.9
Duzib213G0274 Durio zibethinus HOM05D001261 ORTHO05D001130 8.7e-06 54.3 86 30.2
Lalb_Chr18g0048641 Lupinus albus HOM05D001261 ORTHO05D001130 8.7e-06 54.3 96 29.2
THA.LOC104811448 Tarenaya hassleriana HOM05D001261 ORTHO05D001130 8.7e-06 54.3 78 34.6
THA.LOC104822702 Tarenaya hassleriana HOM05D001261 ORTHO05D001130 8.7e-06 54.3 128 28.9


User provided reference genes

Program Settings