Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s3298g0040 Pisum sativum HOM05D003697 ORTHO05D005452 2.1e-61 238.8 115 100.0
Psat0s1016g0040 Pisum sativum HOM05D003697 ORTHO05D005452 3.5e-53 211.5 115 89.6
Psat7g198520 Pisum sativum HOM05D003697 ORTHO05D005452 4.3e-43 177.9 97 85.6
Medtr2g006960 Medicago truncatula HOM05D003697 ORTHO05D005452 5.3e-41 171.0 97 83.5
Psat1g220480 Pisum sativum HOM05D003697 ORTHO05D005452 5.3e-41 171.0 97 84.5
Ca_00071_v3 Cicer arietinum L. HOM05D003697 ORTHO05D005452 1.5e-40 169.5 97 83.5
DCAR_006698 Daucus carota HOM05D003697 ORTHO05D005452 3.4e-40 168.3 111 73.0
TPR.G2085 Trifolium pratense HOM05D003697 ORTHO05D005452 4.5e-40 167.9 97 83.5
arahy.Tifrunner.gnm1.ann1.6LDV6M Arachis hypogaea HOM05D003697 ORTHO05D005452 7.6e-40 167.2 97 81.4
arahy.Tifrunner.gnm1.ann1.IR21Q7 Arachis hypogaea HOM05D003697 ORTHO05D005452 7.6e-40 167.2 97 81.4
TAR381G0967 Trochodendron aralioides HOM05D003697 ORTHO05D005452 9.9e-40 166.8 97 81.4
Glyma.08G187500 Glycine max HOM05D003697 ORTHO05D005452 1.3e-39 166.4 97 80.4
Phvul.006G215600 Phaseolus vulgaris HOM05D003697 ORTHO05D005452 1.3e-39 166.4 97 80.4
TWI14G0038 Tripterygium wilfordii HOM05D003697 ORTHO05D005452 1.7e-39 166.0 110 71.8
Potri.003G018900 Populus trichocarpa HOM05D003697 ORTHO05D005452 2.2e-39 165.6 97 80.4
QL02p099301 Quercus lobata HOM05D003697 ORTHO05D005452 2.2e-39 165.6 97 80.4
GSVIVG01022867001 Vitis vinifera HOM05D003697 ORTHO05D005452 2.2e-39 165.6 97 80.4
Dinv19381 Davidia involucrata HOM05D003697 ORTHO05D005452 2.9e-39 165.2 97 80.4
PGR142G1992 Punica granatum HOM05D003697 ORTHO05D005452 3.8e-39 164.9 97 79.4
Ciclev10000024m.g Citrus clementina HOM05D003697 ORTHO05D005452 4.9e-39 164.5 114 69.3
FAN08G0197 Fragaria x ananassa HOM05D003697 ORTHO05D005452 4.9e-39 164.5 108 72.2
CSS0042528 Camellia sinensis var. sinensis HOM05D003697 ORTHO05D005452 6.4e-39 164.1 114 70.2
Lj6g0024422 Lotus japonicus HOM05D003697 ORTHO05D005452 6.4e-39 164.1 112 71.4
Sabra03G0010400 Salix brachista HOM05D003697 ORTHO05D005452 6.4e-39 164.1 97 79.4
CANSAT11G1101 Cannabis sativa HOM05D003697 ORTHO05D005452 8.4e-39 163.7 97 79.4
FvH4_5g28990 Fragaria vesca HOM05D003697 ORTHO05D005452 8.4e-39 163.7 97 78.4
FAN04G3000 Fragaria x ananassa HOM05D003697 ORTHO05D005452 8.4e-39 163.7 97 78.4
FAN13G2190 Fragaria x ananassa HOM05D003697 ORTHO05D005452 8.4e-39 163.7 97 78.4
FAN18G2119 Fragaria x ananassa HOM05D003697 ORTHO05D005452 8.4e-39 163.7 97 78.4
MD08G1235900 Malus domestica HOM05D003697 ORTHO05D005452 8.4e-39 163.7 97 78.4
Prupe.1G572000 Prunus persica HOM05D003697 ORTHO05D005452 8.4e-39 163.7 97 78.4
RcHm_v2.0_Chr7g0221551 Rosa chinensis HOM05D003697 ORTHO05D005452 8.4e-39 163.7 97 78.4
Dinv24296 Davidia involucrata HOM05D003697 ORTHO05D005452 1.1e-38 163.3 97 79.4
Eucgr.I02739 Eucalyptus grandis HOM05D003697 ORTHO05D005452 1.1e-38 163.3 97 78.4
Atru.chr3.1599 Acer truncatum HOM05D003697 ORTHO05D005452 1.4e-38 162.9 97 79.4
Atru.chr3.1607 Acer truncatum HOM05D003697 ORTHO05D005452 1.4e-38 162.9 97 79.4
AUR62037329 Chenopodium quinoa HOM05D003697 ORTHO05D005452 1.4e-38 162.9 97 79.4
AUR62042597 Chenopodium quinoa HOM05D003697 ORTHO05D005452 1.4e-38 162.9 97 79.4
Oeu027795.2 Olea europaea HOM05D003697 ORTHO05D005452 1.4e-38 162.9 97 79.4
Lalb_Chr13g0295701 Lupinus albus HOM05D003697 ORTHO05D005452 1.9e-38 162.5 97 79.4
Nn1g08409 Nelumbo nucifera HOM05D003697 ORTHO05D005452 1.9e-38 162.5 123 65.9
Haze_01738 Corylus avellana HOM05D003697 ORTHO05D005452 2.4e-38 162.2 97 78.4
SalBow7G4621 Salvia bowleyana HOM05D003697 ORTHO05D005452 2.4e-38 162.2 95 80.0
COL.COLO4_11778 Corchorus olitorius HOM05D003697 ORTHO05D005452 3.2e-38 161.8 97 78.4
MELO3C019456.2 Cucumis melo HOM05D003697 ORTHO05D005452 4.2e-38 161.4 110 70.9
CsaV3_3G019150 Cucumis sativus L. HOM05D003697 ORTHO05D005452 4.2e-38 161.4 110 70.9
ECA240G1790 Erigeron canadensis HOM05D003697 ORTHO05D005452 4.2e-38 161.4 97 78.4
Glyma.05G168600 Glycine max HOM05D003697 ORTHO05D005452 4.2e-38 161.4 97 79.4
Lsat_1_v5_gn_9_118481 Lactuca sativa HOM05D003697 ORTHO05D005452 4.2e-38 161.4 97 76.3
MSTRG.20304 Avicennia marina HOM05D003697 ORTHO05D005452 5.5e-38 161.0 97 78.4
EL10Ac4g08781 Beta vulgaris HOM05D003697 ORTHO05D005452 5.5e-38 161.0 97 76.3
Rhsim05G0119800 Rhododendron simsii HOM05D003697 ORTHO05D005452 5.5e-38 161.0 97 77.3
Sc02g0002740 Simmondsia chinensis HOM05D003697 ORTHO05D005452 5.5e-38 161.0 97 77.3
VMungo0540G0442 Vigna mungo HOM05D003697 ORTHO05D005452 5.5e-38 161.0 97 78.4
CiPaw.06G146300 Carya illinoinensis HOM05D003697 ORTHO05D005452 7.1e-38 160.6 97 78.4
ECA233G0288 Erigeron canadensis HOM05D003697 ORTHO05D005452 7.1e-38 160.6 97 77.3
HanXRQChr09g0249001 Helianthus annuus HOM05D003697 ORTHO05D005452 7.1e-38 160.6 97 77.3
Hma1.2p1_0217F.1_g092200 Hydrangea macrophylla HOM05D003697 ORTHO05D005452 7.1e-38 160.6 97 76.3
Hma1.2p1_0217F.1_g092210 Hydrangea macrophylla HOM05D003697 ORTHO05D005452 7.1e-38 160.6 97 76.3
Cfa005504 Carpinus fangiana HOM05D003697 ORTHO05D005452 9.3e-38 160.2 97 77.3
ClCG05G009590 Citrullus lanatus HOM05D003697 ORTHO05D005452 9.3e-38 160.2 110 70.0
vmacro19883 Vaccinium macrocarpon HOM05D003697 ORTHO05D005452 9.3e-38 160.2 97 77.3
ATR1136G197 Amborella trichopoda HOM05D003697 ORTHO05D005452 1.2e-37 159.8 97 77.3
Manes.10G121900 Manihot esculenta HOM05D003697 ORTHO05D005452 1.2e-37 159.8 97 77.3
Peaxi162Scf00011g00526 Petunia axillaris HOM05D003697 ORTHO05D005452 1.2e-37 159.8 110 68.2
Thecc.02G088500 Theobroma cacao HOM05D003697 ORTHO05D005452 1.2e-37 159.8 97 76.3
Aa31LG4G9290 Aethionema arabicum HOM05D003697 ORTHO05D005452 1.6e-37 159.5 97 76.3
Aqoxy5G02635 Aquilegia oxysepala HOM05D003697 ORTHO05D005452 1.6e-37 159.5 97 77.3
CAN.G798.13 Capsicum annuum HOM05D003697 ORTHO05D005452 1.6e-37 159.5 112 68.8
Cc02_g22700 Coffea canephora HOM05D003697 ORTHO05D005452 1.6e-37 159.5 97 77.3
Gohir.A04G121300 Gossypium hirsutum HOM05D003697 ORTHO05D005452 1.6e-37 159.5 97 77.3
Gohir.A12G027900 Gossypium hirsutum HOM05D003697 ORTHO05D005452 1.6e-37 159.5 97 76.3
Gorai.012G151700 Gossypium raimondii HOM05D003697 ORTHO05D005452 1.6e-37 159.5 97 77.3
Actinidia26154 Actinidia chinensis HOM05D003697 ORTHO05D005452 2.1e-37 159.1 97 75.3
Gohir.D04G163800 Gossypium hirsutum HOM05D003697 ORTHO05D005452 2.7e-37 158.7 97 76.3
SGA_v2.0_scaffold110G31335 Striga asiatica HOM05D003697 ORTHO05D005452 2.7e-37 158.7 97 76.3
Migut.B00820 Erythranthe guttata HOM05D003697 ORTHO05D005452 4.6e-37 157.9 97 75.3
MD15G1427500 Malus domestica HOM05D003697 ORTHO05D005452 6.0e-37 157.5 97 76.3
Sed0005890 Sechium edule HOM05D003697 ORTHO05D005452 7.9e-37 157.1 97 75.3
THA.LOC104801984 Tarenaya hassleriana HOM05D003697 ORTHO05D005452 7.9e-37 157.1 97 74.2
HPP92_015204 Vanilla planifolia HOM05D003697 ORTHO05D005452 1.0e-36 156.8 97 77.3
BcaB03g14879 Brassica carinata HOM05D003697 ORTHO05D005452 1.3e-36 156.4 97 75.3
BcaC08g46557 Brassica carinata HOM05D003697 ORTHO05D005452 1.3e-36 156.4 97 75.3
C06p45330 Brassica napus HOM05D003697 ORTHO05D005452 1.3e-36 156.4 97 75.3
BolC6t39589H Brassica oleracea HOM05D003697 ORTHO05D005452 1.3e-36 156.4 97 75.3
CARHR064520 Cardamine hirsuta HOM05D003697 ORTHO05D005452 1.3e-36 156.4 97 75.3
Solyc01g104040.4 Solanum lycopersicum HOM05D003697 ORTHO05D005452 1.3e-36 156.4 97 75.3
Sopen01g046450 Solanum pennellii HOM05D003697 ORTHO05D005452 1.3e-36 156.4 97 75.3
AT1G71220 Arabidopsis thaliana HOM05D003697 ORTHO05D005452 1.8e-36 156.0 112 67.0
Gohir.D12G027466 Gossypium hirsutum HOM05D003697 ORTHO05D005452 1.8e-36 156.0 88 80.7
Gorai.008G028000 Gossypium raimondii HOM05D003697 ORTHO05D005452 1.8e-36 156.0 88 80.7
Ah.04g162670 Amaranthus hybridus HOM05D003697 ORTHO05D005452 3.0e-36 155.2 112 65.2
AL2G30830 Arabidopsis lyrata HOM05D003697 ORTHO05D005452 3.0e-36 155.2 97 74.2
Carub.0002s1810 Capsella rubella HOM05D003697 ORTHO05D005452 3.0e-36 155.2 97 74.2
Glyma.08G127200 Glycine max HOM05D003697 ORTHO05D005452 3.0e-36 155.2 97 77.3
A07p37570 Brassica napus HOM05D003697 ORTHO05D005452 3.9e-36 154.8 97 74.2
BraA07t31318Z Brassica rapa HOM05D003697 ORTHO05D005452 3.9e-36 154.8 97 74.2
Sp5g26380 Schrenkiella parvula HOM05D003697 ORTHO05D005452 3.9e-36 154.8 97 74.2
unitig_749.g14126 Utricularia gibba HOM05D003697 ORTHO05D005452 3.9e-36 154.8 87 79.3
CDE06G0802 Ceratophyllum demersum HOM05D003697 ORTHO05D005452 6.7e-36 154.1 119 63.9
Thhalv10018004m.g Eutrema salsugineum HOM05D003697 ORTHO05D005452 1.1e-35 153.3 97 74.2
Zm00001eb258320 Zea mays HOM05D003697 ORTHO05D005452 1.9e-35 152.5 109 67.9
PSO017G4515 Papaver somniferum HOM05D003697 ORTHO05D005452 1.6e-34 149.4 111 64.9
PSO170G2453 Papaver somniferum HOM05D003697 ORTHO05D005452 1.6e-34 149.4 111 64.9
SEGI_03237 Sequoiadendron giganteum HOM05D003697 ORTHO05D005452 2.8e-34 148.7 87 74.7
Pp3c3_14060 Physcomitrium patens HOM05D003697 ORTHO05D005452 3.2e-30 135.2 88 70.5
Duzib248G1637 Durio zibethinus HOM05D003697 ORTHO05D005452 5.5e-30 134.4 80 77.5
Mapoly0156s0022 Marchantia polymorpha HOM05D003697 ORTHO05D005452 7.9e-29 130.6 87 70.1
AagrBONN_evm.TU.Sc2ySwM_362.2359 Anthoceros agrestis HOM05D003697 ORTHO05D005452 1.3e-26 123.2 87 67.8
SMO276G0030 Selaginella moellendorffii HOM05D003697 ORTHO05D005452 3.7e-26 121.7 111 55.0
BcaB03g14881 Brassica carinata HOM05D003697 ORTHO05D005452 1.0e-23 113.6 97 57.7
CBR_g48619 Chara braunii HOM05D003697 ORTHO05D005452 9.3e-22 107.1 88 59.1
PRCOL_00004479 Prasinoderma coloniale HOM05D003697 ORTHO05D005452 1.0e-15 87.0 92 54.3
Lj5C253T9 Lonicera japonica HOM05D003697 ORTHO05D005452 7.9e-13 77.4 45 84.4
Nitab4.5_0008466g0010 Nicotiana tabacum HOM05D003697 ORTHO05D005452 3.3e-11 72.0 43 79.1
Cfa024915 Carpinus fangiana HOM05D003697 ORTHO05D005452 1.4e-09 66.6 88 39.8
MCO01G725 Micromonas commoda HOM05D003697 ORTHO05D005452 3.4e-08 62.0 87 41.4
Cre05.g233303 Chlamydomonas reinhardtii HOM05D003697 ORTHO05D005452 7.7e-08 60.8 64 46.9
Cpa.g.sc30.3 Carica papaya HOM05D003697 ORTHO05D005452 1.7e-07 59.7 112 33.9


User provided reference genes

Program Settings