Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s3193g0080 Pisum sativum HOM05D000726 ORTHO05D025659 2.4e-93 345.5 174 100.0
Psat3g174600 Pisum sativum HOM05D000726 ORTHO05D025659 1.0e-72 276.9 150 92.7
Psat3g174680 Pisum sativum HOM05D000726 ORTHO05D025659 4.6e-65 251.5 151 85.4
Psat3g172760 Pisum sativum HOM05D000726 ORTHO05D025659 6.3e-54 214.5 126 86.5
Psat2g171280 Pisum sativum HOM05D000726 ORTHO05D007554 9.1e-45 184.1 119 76.5
Medtr5g015600 Medicago truncatula HOM05D000726 ORTHO05D007554 1.5e-39 166.8 119 68.9
TPR.G34847 Trifolium pratense HOM05D000726 ORTHO05D007554 1.7e-38 163.3 117 66.7
Ca_24700_v3 Cicer arietinum L. HOM05D000726 ORTHO05D007554 4.8e-38 161.8 119 67.2
Glyma.01G193500 Glycine max HOM05D000726 ORTHO05D007554 7.7e-36 154.5 119 63.0
arahy.Tifrunner.gnm1.ann1.1ZHU8Z Arachis hypogaea HOM05D000726 ORTHO05D007554 5.0e-35 151.8 119 63.9
arahy.Tifrunner.gnm1.ann1.6361M0 Arachis hypogaea HOM05D000726 ORTHO05D007554 6.5e-35 151.4 119 63.9
Lalb_Chr09g0323571 Lupinus albus HOM05D000726 ORTHO05D007554 2.7e-33 146.0 117 59.0
Lj2g0006912 Lotus japonicus HOM05D000726 ORTHO05D007554 4.7e-33 145.2 120 60.8
Potri.007G055400 Populus trichocarpa HOM05D000726 ORTHO05D007554 4.1e-29 132.1 115 58.3
Sabra07G0047700 Salix brachista HOM05D000726 ORTHO05D007554 5.4e-29 131.7 115 57.4
Haze_15292 Corylus avellana HOM05D000726 ORTHO05D007554 4.5e-28 128.6 143 47.6
Atru.chr3.177 Acer truncatum HOM05D000726 ORTHO05D007554 7.7e-28 127.9 123 52.0
Atru.BG.105.p Acer truncatum HOM05D000726 ORTHO05D007554 1.3e-27 127.1 123 52.0
QL06p039670 Quercus lobata HOM05D000726 ORTHO05D007554 3.8e-27 125.6 121 50.4
VMungo1215G2083 Vigna mungo HOM05D000726 ORTHO05D007554 1.1e-26 124.0 159 41.5
Phvul.002G011500 Phaseolus vulgaris HOM05D000726 ORTHO05D007554 3.3e-26 122.5 159 41.5
Cfa004123 Carpinus fangiana HOM05D000726 ORTHO05D007554 4.2e-26 122.1 143 44.8
Ciclev10024730m.g Citrus clementina HOM05D000726 ORTHO05D007554 4.2e-26 122.1 121 49.6
MD02G1184600 Malus domestica HOM05D000726 ORTHO05D007554 6.1e-25 118.2 120 50.8
FAN02G1686 Fragaria x ananassa HOM05D000726 ORTHO05D007554 1.0e-24 117.5 120 48.3
Manes.13G112300 Manihot esculenta HOM05D000726 ORTHO05D007554 1.4e-24 117.1 123 47.2
Prupe.6G221900 Prunus persica HOM05D000726 ORTHO05D007554 2.3e-24 116.3 115 53.0
ClCG01G017520 Citrullus lanatus HOM05D000726 ORTHO05D007554 4.0e-24 115.5 119 45.4
MELO3C007629.2 Cucumis melo HOM05D000726 ORTHO05D007554 4.0e-24 115.5 148 39.2
Dinv26921 Davidia involucrata HOM05D000726 ORTHO05D007554 4.0e-24 115.5 117 47.0
FAN05G3645 Fragaria x ananassa HOM05D000726 ORTHO05D007554 5.2e-24 115.2 116 48.3
FAN14G0573 Fragaria x ananassa HOM05D000726 ORTHO05D007554 5.2e-24 115.2 120 47.5
TAR376G0399 Trochodendron aralioides HOM05D000726 ORTHO05D007554 8.9e-24 114.4 123 45.5
FvH4_6g31560 Fragaria vesca HOM05D000726 ORTHO05D007554 1.2e-23 114.0 120 46.7
TWI09G1290 Tripterygium wilfordii HOM05D000726 ORTHO05D007554 2.6e-23 112.8 119 47.9
RcHm_v2.0_Chr2g0138631 Rosa chinensis HOM05D000726 ORTHO05D007554 4.4e-23 112.1 118 49.2
CsaV3_6G044070 Cucumis sativus L. HOM05D000726 ORTHO05D007554 2.2e-22 109.8 119 43.7
Sed0012994 Sechium edule HOM05D000726 ORTHO05D007554 2.8e-22 109.4 112 48.2
CANSAT01G3261 Cannabis sativa HOM05D000726 ORTHO05D007554 6.3e-22 108.2 117 47.9
COL.COLO4_11566 Corchorus olitorius HOM05D000726 ORTHO05D007554 8.3e-22 107.8 105 49.5
Actinidia36435 Actinidia chinensis HOM05D000726 ORTHO05D007554 1.8e-21 106.7 118 42.4
Eucgr.H02305 Eucalyptus grandis HOM05D000726 ORTHO05D007554 4.1e-21 105.5 114 47.4
Gorai.007G222900 Gossypium raimondii HOM05D000726 ORTHO05D007554 4.1e-21 105.5 119 46.2
Thecc.01G071800 Theobroma cacao HOM05D000726 ORTHO05D007554 4.1e-21 105.5 115 48.7
Gohir.D11G207900 Gossypium hirsutum HOM05D000726 ORTHO05D007554 5.4e-21 105.1 119 46.2
PSO675G6338 Papaver somniferum HOM05D000726 ORTHO05D007554 9.2e-21 104.4 148 37.8
CSS0015479 Camellia sinensis var. sinensis HOM05D000726 ORTHO05D007554 1.2e-20 104.0 117 42.7
CSS0022432 Camellia sinensis var. sinensis HOM05D000726 ORTHO05D007554 1.2e-20 104.0 117 42.7
Gohir.A11G215400 Gossypium hirsutum HOM05D000726 ORTHO05D007554 1.2e-20 104.0 119 46.2
PGR102G1358 Punica granatum HOM05D000726 ORTHO05D007554 2.0e-20 103.2 116 40.5
Duzib147G0272 Durio zibethinus HOM05D000726 ORTHO05D007554 3.5e-20 102.4 119 44.5
vmacro05404 Vaccinium macrocarpon HOM05D000726 ORTHO05D007554 5.9e-20 101.7 117 42.7
Rhsim10G0100700 Rhododendron simsii HOM05D000726 ORTHO05D007554 7.8e-20 101.3 121 38.0
PSO541G0636 Papaver somniferum HOM05D000726 ORTHO05D007554 2.9e-19 99.4 148 36.5
Glyma.08G243550 Glycine max HOM05D000726 ORTHO05D025659 8.6e-19 97.8 64 67.2
Migut.H00354 Erythranthe guttata HOM05D000726 ORTHO05D007554 1.1e-18 97.4 114 43.0
Hund16395 Selenicereus undatus HOM05D000726 ORTHO05D007554 1.5e-18 97.1 116 44.8
SHI31766 Sapria himalayana HOM05D000726 ORTHO05D007554 5.6e-18 95.1 143 39.9
Peaxi162Scf00118g01929 Petunia axillaris HOM05D000726 ORTHO05D007554 2.8e-17 92.8 107 42.1
Ah.03g140460 Amaranthus hybridus HOM05D000726 ORTHO05D007554 3.6e-17 92.4 122 41.8
EL10Ac6g15628 Beta vulgaris HOM05D000726 ORTHO05D007554 3.6e-17 92.4 122 42.6
MSTRG.23676 Avicennia marina HOM05D000726 ORTHO05D007554 1.0e-16 90.9 118 39.0
Nitab4.5_0001417g0030 Nicotiana tabacum HOM05D000726 ORTHO05D007554 1.0e-16 90.9 121 37.2
THA.LOC104819266 Tarenaya hassleriana HOM05D000726 ORTHO05D007554 1.0e-16 90.9 138 37.7
Sc03g0002340 Simmondsia chinensis HOM05D000726 ORTHO05D007554 1.8e-16 90.1 112 41.1
Cc07_g07020 Coffea canephora HOM05D000726 ORTHO05D007554 1.2e-15 87.4 132 34.8
Nitab4.5_0006813g0010 Nicotiana tabacum HOM05D000726 ORTHO05D007554 3.4e-15 85.9 121 35.5
SalBow3G2688 Salvia bowleyana HOM05D000726 ORTHO05D007554 3.4e-15 85.9 104 38.5
Cpa.g.sc6.26 Carica papaya HOM05D000726 ORTHO05D007554 4.4e-15 85.5 118 39.0
AUR62040247 Chenopodium quinoa HOM05D000726 ORTHO05D007554 5.8e-15 85.1 122 38.5
AT1G64960 Arabidopsis thaliana HOM05D000726 ORTHO05D007554 7.5e-15 84.7 104 39.4
DCAR_010826 Daucus carota HOM05D000726 ORTHO05D007554 9.8e-15 84.3 134 35.1
Aa31LG2G2150 Aethionema arabicum HOM05D000726 ORTHO05D007554 1.3e-14 84.0 104 42.3
PGSC0003DMG400009094 Solanum tuberosum HOM05D000726 ORTHO05D007554 1.3e-14 84.0 121 36.4
Lj7A95G20 Lonicera japonica HOM05D000726 ORTHO05D007554 2.2e-14 83.2 139 36.0
Solyc03g044020.4 Solanum lycopersicum HOM05D000726 ORTHO05D007554 2.2e-14 83.2 121 36.4
Sopen03g007820 Solanum pennellii HOM05D000726 ORTHO05D007554 2.2e-14 83.2 121 36.4
Thhalv10006613m.g Eutrema salsugineum HOM05D000726 ORTHO05D007554 2.9e-14 82.8 101 40.6
A07p32680 Brassica napus HOM05D000726 ORTHO05D007554 3.7e-14 82.4 101 41.6
BraA07t30892Z Brassica rapa HOM05D000726 ORTHO05D007554 3.7e-14 82.4 101 41.6
CAN.G278.12 Capsicum annuum HOM05D000726 ORTHO05D007554 4.9e-14 82.0 121 34.7
CARHR056360 Cardamine hirsuta HOM05D000726 ORTHO05D007554 6.4e-14 81.6 133 35.3
Sp5g19220 Schrenkiella parvula HOM05D000726 ORTHO05D007554 8.3e-14 81.3 133 33.8
Thhalv10000018m.g Eutrema salsugineum HOM05D000726 ORTHO05D007554 1.1e-13 80.9 104 38.5
BolC6t38979H Brassica oleracea HOM05D000726 ORTHO05D007554 3.2e-13 79.3 130 36.2
Nn4g25316 Nelumbo nucifera HOM05D000726 ORTHO05D007554 3.2e-13 79.3 140 32.1
SGA_v2.0_scaffold15G07449 Striga asiatica HOM05D000726 ORTHO05D007554 3.2e-13 79.3 114 35.1
Thhalv10023223m.g Eutrema salsugineum HOM05D000726 ORTHO05D007554 4.1e-13 79.0 138 33.3
C06p38860 Brassica napus HOM05D000726 ORTHO05D007554 7.0e-13 78.2 130 36.2
AL2G19510 Arabidopsis lyrata HOM05D000726 ORTHO05D007554 9.2e-13 77.8 104 36.5
BcaB03g15339 Brassica carinata HOM05D000726 ORTHO05D007554 1.6e-12 77.0 130 36.9
Carub.0002s1010 Capsella rubella HOM05D000726 ORTHO05D007554 2.0e-12 76.6 124 33.9
FAN09G4729 Fragaria x ananassa HOM05D000726 ORTHO05D007554 2.0e-12 76.6 93 46.2
AUR62003999 Chenopodium quinoa HOM05D000726 ORTHO05D007554 7.8e-12 74.7 103 40.8
Lsat_1_v5_gn_4_160781 Lactuca sativa HOM05D000726 ORTHO05D007554 1.0e-11 74.3 106 37.7
ECA232G2303 Erigeron canadensis HOM05D000726 ORTHO05D007554 3.6e-09 65.9 117 30.8
ATR0208G028 Amborella trichopoda HOM05D000726 ORTHO05D007554 1.5e-07 60.5 103 33.0
HPP92_014040 Vanilla planifolia HOM05D000726 ORTHO05D007554 5.8e-07 58.5 118 30.5
Thhalv10001287m.g Eutrema salsugineum HOM05D000726 ORTHO05D007554 1.3e-06 57.4 113 33.6
RcHm_v2.0_Chr2g0138441 Rosa chinensis HOM05D000726 ORTHO05D007554 2.9e-06 56.2 44 54.5
Zm00001eb051460 Zea mays HOM05D000726 ORTHO05D007554 8.3e-06 54.7 121 30.6


User provided reference genes

Program Settings