Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s3161g0160 Pisum sativum HOM05D007311 ORTHO05D009011 2.1e-79 298.9 147 100.0
TPR.G7011 Trifolium pratense HOM05D007311 ORTHO05D009011 3.0e-73 278.5 147 91.8
Ca_09529_v3 Cicer arietinum L. HOM05D007311 ORTHO05D009011 1.6e-71 272.7 147 89.8
Glyma.19G247100 Glycine max HOM05D007311 ORTHO05D009011 2.6e-69 265.4 148 89.2
Glyma.03G249600 Glycine max HOM05D007311 ORTHO05D009011 4.5e-69 264.6 148 87.8
Medtr7g115450 Medicago truncatula HOM05D007311 ORTHO05D009011 1.0e-68 263.5 147 87.8
Medtr7g115470 Medicago truncatula HOM05D007311 ORTHO05D009011 1.0e-68 263.5 147 87.8
Phvul.006G104200 Phaseolus vulgaris HOM05D007311 ORTHO05D009011 4.2e-67 258.1 148 86.5
Lj1g0003439 Lotus japonicus HOM05D007311 ORTHO05D009011 1.2e-66 256.5 148 87.2
VMungo0540G0453 Vigna mungo HOM05D007311 ORTHO05D009011 3.5e-66 255.0 148 85.1
Lalb_Chr15g0076111 Lupinus albus HOM05D007311 ORTHO05D009011 6.0e-66 254.2 148 85.8
arahy.Tifrunner.gnm1.ann1.C28JQA Arachis hypogaea HOM05D007311 ORTHO05D009011 1.0e-65 253.4 148 84.5
arahy.Tifrunner.gnm1.ann1.M0M2WX Arachis hypogaea HOM05D007311 ORTHO05D009011 1.0e-65 253.4 148 84.5
CiPaw.11G077300 Carya illinoinensis HOM05D007311 ORTHO05D009011 2.9e-60 235.3 148 78.4
QL12p002522 Quercus lobata HOM05D007311 ORTHO05D009011 2.9e-60 235.3 148 78.4
Manes.15G187600 Manihot esculenta HOM05D007311 ORTHO05D009011 4.2e-59 231.5 148 77.0
Prupe.5G015700 Prunus persica HOM05D007311 ORTHO05D009011 1.6e-58 229.6 147 76.9
RcHm_v2.0_Chr7g0214961 Rosa chinensis HOM05D007311 ORTHO05D009011 1.6e-58 229.6 148 75.7
Ciclev10002031m.g Citrus clementina HOM05D007311 ORTHO05D009011 1.0e-57 226.9 148 73.0
THA.LOC104811225 Tarenaya hassleriana HOM05D007311 ORTHO05D009011 5.1e-57 224.6 148 71.6
ClCG07G011190 Citrullus lanatus HOM05D000351 ORTHO05D000250 1.9e-56 222.6 148 71.6
Aa31LG6G2000 Aethionema arabicum HOM05D007311 ORTHO05D009011 4.3e-56 221.5 148 73.6
GSVIVG01036913001 Vitis vinifera HOM05D007311 ORTHO05D009011 5.7e-56 221.1 148 74.3
Gohir.D08G169100 Gossypium hirsutum HOM05D007311 ORTHO05D009011 7.4e-56 220.7 148 73.0
MD16G1286900 Malus domestica HOM05D007311 ORTHO05D009011 7.4e-56 220.7 148 74.3
TWI32G0505 Tripterygium wilfordii HOM05D007311 ORTHO05D009011 2.2e-55 219.2 148 73.0
BraA01t01079Z Brassica rapa HOM05D007311 ORTHO05D009011 2.8e-55 218.8 148 70.3
Sed0011898 Sechium edule HOM05D000351 ORTHO05D000250 2.8e-55 218.8 145 72.4
EL10Ac9g22274 Beta vulgaris HOM05D007311 ORTHO05D009011 3.7e-55 218.4 147 68.7
Duzib205G2009 Durio zibethinus HOM05D007311 ORTHO05D009011 3.7e-55 218.4 148 72.3
Hma1.2p1_0294F.1_g116450 Hydrangea macrophylla HOM05D007311 ORTHO05D009011 3.7e-55 218.4 145 73.8
A01p11360 Brassica napus HOM05D000351 ORTHO05D009011 6.3e-55 217.6 148 69.6
Gohir.A08G147900 Gossypium hirsutum HOM05D007311 ORTHO05D009011 6.3e-55 217.6 148 72.3
Nn3g18546 Nelumbo nucifera HOM05D007311 ORTHO05D009011 6.3e-55 217.6 147 70.7
FAN08G0573 Fragaria x ananassa HOM05D007311 ORTHO05D009011 8.2e-55 217.2 144 73.6
BcaC09g51414 Brassica carinata HOM05D007311 ORTHO05D009011 1.1e-54 216.9 148 70.3
AUR62039076 Chenopodium quinoa HOM05D007311 ORTHO05D009011 1.1e-54 216.9 147 68.7
Sp7g18020 Schrenkiella parvula HOM05D007311 ORTHO05D009011 1.1e-54 216.9 148 70.9
MELO3C016211.2 Cucumis melo HOM05D007311 ORTHO05D009011 1.4e-54 216.5 148 70.9
Aqoxy102s011 Aquilegia oxysepala HOM05D007311 ORTHO05D009011 2.4e-54 215.7 148 68.2
Aqoxy2G03516 Aquilegia oxysepala HOM05D007311 ORTHO05D009011 2.4e-54 215.7 148 68.2
Cc01_g03300 Coffea canephora HOM05D007311 ORTHO05D009011 4.1e-54 214.9 147 71.4
CsaV3_4G007060 Cucumis sativus L. HOM05D007311 ORTHO05D009011 4.1e-54 214.9 148 70.3
C01p13360 Brassica napus HOM05D007311 ORTHO05D009011 5.3e-54 214.5 148 69.6
Cfa012633 Carpinus fangiana HOM05D007311 ORTHO05D009011 6.9e-54 214.2 136 76.5
FAN18G0784 Fragaria x ananassa HOM05D007311 ORTHO05D009011 6.9e-54 214.2 172 62.8
Migut.E01383 Erythranthe guttata HOM05D007311 ORTHO05D009011 9.1e-54 213.8 148 70.9
PGR031G0344 Punica granatum HOM05D007311 ORTHO05D009011 9.1e-54 213.8 148 69.6
COL.COLO4_16729 Corchorus olitorius HOM05D007311 ORTHO05D009011 2.6e-53 212.2 148 70.9
Nitab4.5_0000623g0080 Nicotiana tabacum HOM05D007311 ORTHO05D009011 2.6e-53 212.2 145 67.6
Thhalv10024796m.g Eutrema salsugineum HOM05D000351 ORTHO05D009011 4.5e-53 211.5 148 68.9
Thecc.03G322100 Theobroma cacao HOM05D007311 ORTHO05D009011 4.5e-53 211.5 154 70.8
CARHR226190 Cardamine hirsuta HOM05D007311 ORTHO05D009011 7.7e-53 210.7 148 68.9
FvH4_5g24490 Fragaria vesca HOM05D007311 ORTHO05D009011 7.7e-53 210.7 172 61.6
TAR629G0827 Trochodendron aralioides HOM05D007311 ORTHO05D009011 7.7e-53 210.7 148 68.9
AT4G19400 Arabidopsis thaliana HOM05D007311 ORTHO05D009011 1.0e-52 210.3 149 68.5
AT4G19410 Arabidopsis thaliana HOM05D000351 ORTHO05D009011 1.0e-52 210.3 149 68.5
DCAR_030948 Daucus carota HOM05D007311 ORTHO05D009011 2.2e-52 209.1 148 71.6
MSTRG.1753 Avicennia marina HOM05D007311 ORTHO05D009011 2.9e-52 208.8 148 68.2
Eucgr.E01832 Eucalyptus grandis HOM05D007311 ORTHO05D009011 2.9e-52 208.8 149 71.8
Potri.003G106700 Populus trichocarpa HOM05D007311 ORTHO05D009011 3.8e-52 208.4 149 69.1
Carub.0007s2183 Capsella rubella HOM05D007311 ORTHO05D009011 5.0e-52 208.0 149 67.1
Oeu031947.3 Olea europaea HOM05D007311 ORTHO05D009011 5.0e-52 208.0 168 63.7
Peaxi162Scf00330g01216 Petunia axillaris HOM05D007311 ORTHO05D009011 8.5e-52 207.2 146 67.8
AL7G34740 Arabidopsis lyrata HOM05D007311 ORTHO05D009011 1.1e-51 206.8 149 67.8
Haze_08033 Corylus avellana HOM05D007311 ORTHO05D009011 1.1e-51 206.8 213 54.0
Nitab4.5_0007008g0080 Nicotiana tabacum HOM05D007311 ORTHO05D009011 1.1e-51 206.8 145 65.5
Hund06317 Selenicereus undatus HOM05D007311 ORTHO05D009011 1.1e-51 206.8 148 66.9
BcaNung01781 Brassica carinata HOM05D007311 ORTHO05D009011 1.4e-51 206.5 148 66.2
CAN.G22.34 Capsicum annuum HOM05D007311 ORTHO05D009011 7.2e-51 204.1 145 65.5
Sabra03G0073500 Salix brachista HOM05D007311 ORTHO05D009011 7.2e-51 204.1 149 67.1
CANSAT35G1819 Cannabis sativa HOM05D000351 ORTHO05D000250 1.2e-50 203.4 153 64.7
Solyc08g075070.3 Solanum lycopersicum HOM05D007311 ORTHO05D009011 1.6e-50 203.0 145 66.2
Gorai.004G176300 Gossypium raimondii HOM05D007311 ORTHO05D009011 2.1e-50 202.6 186 58.1
Lsat_1_v5_gn_9_12020 Lactuca sativa HOM05D007311 ORTHO05D009011 3.0e-49 198.7 148 65.5
SalBow3G0367 Salvia bowleyana HOM05D007311 ORTHO05D009011 3.9e-49 198.4 146 65.8
CDE11G0786 Ceratophyllum demersum HOM05D007311 ORTHO05D009011 1.1e-48 196.8 148 64.2
Sc18g0005580 Simmondsia chinensis HOM05D007311 ORTHO05D009011 3.3e-48 195.3 136 69.9
ECA233G4235 Erigeron canadensis HOM05D007311 ORTHO05D009011 7.4e-48 194.1 151 62.9
PSO210G1792 Papaver somniferum HOM05D007311 ORTHO05D009011 7.4e-48 194.1 146 64.4
HanXRQChr07g0198461 Helianthus annuus HOM05D007311 ORTHO05D009011 9.7e-48 193.7 149 61.7
vmacro22112 Vaccinium macrocarpon HOM05D007311 ORTHO05D009011 1.3e-47 193.4 171 60.2
HPP92_005283 Vanilla planifolia HOM05D007311 ORTHO05D009011 1.7e-47 193.0 144 64.6
SGA_v2.0_scaffold144G35891 Striga asiatica HOM05D007311 ORTHO05D009011 2.2e-47 192.6 165 60.6
unitig_899.g14733 Utricularia gibba HOM05D007311 ORTHO05D009011 3.7e-47 191.8 149 62.4
PSO238G0022 Papaver somniferum HOM05D007311 ORTHO05D009011 4.8e-47 191.4 146 63.7
Cpa.g.sc542.2 Carica papaya HOM05D007311 ORTHO05D009011 2.4e-46 189.1 130 70.0
AUR62010310 Chenopodium quinoa HOM05D007311 ORTHO05D009011 2.0e-45 186.0 119 69.7
QL12p002612 Quercus lobata HOM05D007311 ORTHO05D009011 5.9e-45 184.5 146 64.4
ATR0796G066 Amborella trichopoda HOM05D007311 ORTHO05D009011 2.9e-44 182.2 148 59.5
PGSC0003DMG400020814 Solanum tuberosum HOM05D007311 ORTHO05D009011 1.4e-43 179.9 173 52.6
Zm00001eb284430 Zea mays HOM05D007311 ORTHO05D009011 4.2e-43 178.3 145 54.5
MBI03_g29283_MAGBIO Magnolia biondii HOM05D006174 ORTHO05D007987 9.4e-43 177.2 127 66.1
CSS0046759 Camellia sinensis var. sinensis HOM05D007311 ORTHO05D009011 1.1e-38 163.7 111 75.7
Os05g0241400 Oryza sativa ssp. japonica HOM05D007311 ORTHO05D009011 5.3e-38 161.4 119 58.8
Dinv37446 Davidia involucrata HOM05D007311 ORTHO05D009011 5.5e-35 151.4 104 71.2
Ah.01g011070 Amaranthus hybridus HOM05D007311 ORTHO05D009011 6.5e-28 127.9 104 61.5
SEGI_31752 Sequoiadendron giganteum HOM05D007311 ORTHO05D009011 5.5e-27 124.8 101 56.4
TWI60G1527 Tripterygium wilfordii HOM05D007311 ORTHO05D009011 7.2e-27 124.4 148 48.6
Sopen08g023700 Solanum pennellii HOM05D007311 ORTHO05D009011 2.3e-25 119.4 90 63.3
AagrBONN_evm.TU.Sc2ySwM_228.4293 Anthoceros agrestis HOM05D007311 ORTHO05D009011 4.0e-25 118.6 135 39.3
Eucgr.E01790 Eucalyptus grandis HOM05D007311 ORTHO05D009011 5.7e-24 114.8 82 69.5
BcaC02g07636 Brassica carinata HOM05D007311 ORTHO05D009011 1.1e-19 100.5 103 54.4
Eucgr.E01869 Eucalyptus grandis HOM05D007311 ORTHO05D009011 1.4e-17 93.6 66 71.2
Medtr5g045430 Medicago truncatula HOM05D007311 ORTHO05D009011 2.3e-17 92.8 66 72.7
SMO139G0010 Selaginella moellendorffii HOM05D007311 ORTHO05D009011 4.0e-17 92.0 151 34.4
Ciclev10003443m.g Citrus clementina HOM05D007311 ORTHO05D009011 2.0e-16 89.7 77 57.1
SalBow8G5581 Salvia bowleyana HOM05D007311 ORTHO05D009011 2.0e-16 89.7 65 64.6
Rhsim07G0141400 Rhododendron simsii HOM05D000351 ORTHO05D000250 2.6e-16 89.4 122 45.9
SalBow1G6002 Salvia bowleyana HOM05D007311 ORTHO05D009011 3.4e-16 89.0 64 65.6
Mapoly0040s0015 Marchantia polymorpha HOM05D007311 ORTHO05D009011 1.7e-15 86.7 138 31.9
FAN13G1634 Fragaria x ananassa HOM05D007311 ORTHO05D009011 4.1e-14 82.0 45 77.8
Medtr2g084355 Medicago truncatula HOM05D003237 ORTHO05D003631 1.3e-12 77.0 44 88.6
Ca_12103_v3 Cicer arietinum L. HOM05D007311 ORTHO05D009011 1.9e-11 73.2 38 89.5
Zm00001eb347540 Zea mays HOM05D007311 ORTHO05D009011 7.3e-11 71.2 66 47.0


User provided reference genes

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