Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s3115g0040 Pisum sativum HOM05D006850 ORTHO05D008545 1.5e-149 532.7 246 100.0
Medtr0180s0050 Medicago truncatula HOM05D006850 ORTHO05D008545 1.7e-129 466.1 269 80.3
Ca_03895_v3 Cicer arietinum L. HOM05D006850 ORTHO05D008545 1.3e-126 456.4 245 84.5
TPR.G16604 Trifolium pratense HOM05D006850 ORTHO05D008545 2.6e-114 415.6 249 77.5
Lj6g0025243 Lotus japonicus HOM05D006850 ORTHO05D008545 4.8e-108 394.8 265 71.3
Lalb_Chr21g0314461 Lupinus albus HOM05D006850 ORTHO05D008545 4.6e-103 378.3 234 74.8
Glyma.20G041000 Glycine max HOM05D006850 ORTHO05D008545 1.1e-101 373.6 245 71.8
Phvul.006G014500 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 5.7e-101 371.3 244 70.1
Glyma.07G232000 Glycine max HOM05D006850 ORTHO05D008545 7.4e-101 370.9 241 72.2
VMungo0540G1950 Vigna mungo HOM05D006850 ORTHO05D008545 2.8e-100 369.0 245 69.8
arahy.Tifrunner.gnm1.ann1.5G2EZD Arachis hypogaea HOM05D006850 ORTHO05D008545 1.4e-94 350.1 250 70.0
arahy.Tifrunner.gnm1.ann1.TFQN26 Arachis hypogaea HOM05D006850 ORTHO05D008545 8.8e-94 347.4 250 69.2
QL01p017096 Quercus lobata HOM05D006850 ORTHO05D008545 2.2e-92 342.8 245 66.9
Prupe.4G265500 Prunus persica HOM05D006850 ORTHO05D008545 4.5e-90 335.1 247 66.0
Haze_23232 Corylus avellana HOM05D006850 ORTHO05D008545 1.1e-88 330.5 246 63.0
Cfa009858 Carpinus fangiana HOM05D006850 ORTHO05D008545 1.9e-88 329.7 246 63.4
MD03G1165500 Malus domestica HOM05D006850 ORTHO05D008545 3.6e-87 325.5 248 63.3
CiPaw.14G112900 Carya illinoinensis HOM05D006850 ORTHO05D008545 1.8e-86 323.2 245 63.7
Potri.001G275300 Populus trichocarpa HOM05D006850 ORTHO05D008545 1.8e-86 323.2 253 63.6
PGR102G2982 Punica granatum HOM05D006850 ORTHO05D008545 3.3e-85 318.9 246 61.0
Duzib150G1265 Durio zibethinus HOM05D006850 ORTHO05D008545 4.4e-85 318.5 246 64.2
Duzib170G0642 Durio zibethinus HOM05D006850 ORTHO05D008545 4.4e-85 318.5 244 63.1
Sabra16G0169600 Salix brachista HOM05D006850 ORTHO05D008545 4.4e-85 318.5 273 58.6
GSVIVG01037285001 Vitis vinifera HOM05D006850 ORTHO05D008545 1.3e-84 317.0 241 64.3
Actinidia06966 Actinidia chinensis HOM05D006850 ORTHO05D008545 1.7e-84 316.6 237 63.7
Dinv36163 Davidia involucrata HOM05D006850 ORTHO05D008545 1.7e-84 316.6 254 62.2
TWI31G0452 Tripterygium wilfordii HOM05D006850 ORTHO05D008545 4.8e-84 315.1 244 60.2
Gorai.001G133600 Gossypium raimondii HOM05D006850 ORTHO05D008545 6.3e-84 314.7 246 63.8
CANSAT54G0445 Cannabis sativa HOM05D006850 ORTHO05D008545 8.2e-84 314.3 251 61.0
Hund07436 Selenicereus undatus HOM05D006850 ORTHO05D008545 1.8e-83 313.2 241 61.0
Gohir.D07G123600 Gossypium hirsutum HOM05D006850 ORTHO05D008545 3.1e-83 312.4 246 63.4
Hma1.2p1_0262F.1_g105345 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 7.0e-83 311.2 248 60.9
Hma1.2p1_3601F.1_g336990 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 7.0e-83 311.2 248 60.9
Manes.02G139100 Manihot esculenta HOM05D006850 ORTHO05D008545 1.2e-82 310.5 251 60.6
Oeu030634.1 Olea europaea HOM05D006850 ORTHO05D008545 1.6e-82 310.1 246 59.8
Gohir.A07G119400 Gossypium hirsutum HOM05D006850 ORTHO05D008545 2.7e-82 309.3 246 63.4
Rhsim13G0209200 Rhododendron simsii HOM05D006850 ORTHO05D008545 2.7e-82 309.3 245 60.8
Phvul.009G232900 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 3.5e-82 308.9 238 63.0
Ah.06g194580 Amaranthus hybridus HOM05D006850 ORTHO05D008545 7.7e-82 307.8 243 57.2
EL10Ac4g10117 Beta vulgaris HOM05D006850 ORTHO05D008545 1.0e-81 307.4 244 57.4
ClCG02G022830 Citrullus lanatus HOM05D006850 ORTHO05D008545 2.2e-81 306.2 250 58.8
Sc06g0004690 Simmondsia chinensis HOM05D006850 ORTHO05D008545 3.8e-81 305.4 236 61.9
Cc01_g05370 Coffea canephora HOM05D006850 ORTHO05D008545 1.5e-80 303.5 247 58.3
Eucgr.B03735 Eucalyptus grandis HOM05D006850 ORTHO05D008545 2.5e-80 302.8 246 58.9
AL7G23370 Arabidopsis lyrata HOM05D006850 ORTHO05D008545 3.2e-80 302.4 225 63.1
Cpa.g.sc157.64 Carica papaya HOM05D006850 ORTHO05D008545 5.5e-80 301.6 235 62.1
Thhalv10026099m.g Eutrema salsugineum HOM05D006850 ORTHO05D008545 5.5e-80 301.6 250 58.8
Ciclev10016719m.g Citrus clementina HOM05D006850 ORTHO05D008545 7.2e-80 301.2 214 66.8
BcaNung01334 Brassica carinata HOM05D004115 ORTHO05D005004 9.4e-80 300.8 248 58.1
AUR62000194 Chenopodium quinoa HOM05D006850 ORTHO05D008545 1.2e-79 300.4 243 58.0
Atru.chr3.2891 Acer truncatum HOM05D006850 ORTHO05D008545 2.1e-79 299.7 249 61.8
Carub.0007s1152 Capsella rubella HOM05D006850 ORTHO05D008545 2.1e-79 299.7 206 67.0
BolC1t01003H Brassica oleracea HOM05D006850 ORTHO05D008545 4.7e-79 298.5 251 59.0
CSS0022862 Camellia sinensis var. sinensis HOM05D006850 ORTHO05D008545 4.7e-79 298.5 249 59.8
DCAR_024408 Daucus carota HOM05D006850 ORTHO05D008545 6.1e-79 298.1 271 53.9
Sp7g27010 Schrenkiella parvula HOM05D006850 ORTHO05D008545 8.0e-79 297.7 252 58.3
MSTRG.18462 Avicennia marina HOM05D006850 ORTHO05D008545 1.0e-78 297.4 248 58.5
AT4G29070 Arabidopsis thaliana HOM05D006850 ORTHO05D008545 1.8e-78 296.6 206 66.5
THA.LOC104826454 Tarenaya hassleriana HOM05D006850 ORTHO05D008545 1.8e-78 296.6 240 59.6
vmacro04034 Vaccinium macrocarpon HOM05D006850 ORTHO05D008545 1.8e-78 296.6 249 59.0
Hund21980 Selenicereus undatus HOM05D006850 ORTHO05D008545 2.3e-78 296.2 204 65.7
AUR62006544 Chenopodium quinoa HOM05D006850 ORTHO05D008545 4.0e-78 295.4 236 59.3
RcHm_v2.0_Chr5g0050481 Rosa chinensis HOM05D006850 ORTHO05D008545 4.0e-78 295.4 265 58.9
CARHR236810 Cardamine hirsuta HOM05D006850 ORTHO05D008545 6.8e-78 294.7 206 65.5
MELO3C014560.2 Cucumis melo HOM05D006850 ORTHO05D008545 1.2e-77 293.9 250 58.0
Lsat_1_v5_gn_2_3500 Lactuca sativa HOM05D006850 ORTHO05D008545 1.5e-77 293.5 219 62.1
HanXRQChr14g0427601 Helianthus annuus HOM05D006850 ORTHO05D008545 2.6e-77 292.7 225 61.3
CsaV3_6G038970 Cucumis sativus L. HOM05D006850 ORTHO05D008545 3.4e-77 292.4 250 57.6
Aa31LG2G21380 Aethionema arabicum HOM05D006850 ORTHO05D008545 4.4e-77 292.0 253 56.9
Peaxi162Scf00032g02418 Petunia axillaris HOM05D006850 ORTHO05D008545 4.4e-77 292.0 225 60.9
BcaC09g51693 Brassica carinata HOM05D006850 ORTHO05D008545 2.2e-76 289.7 249 58.2
Migut.D00666 Erythranthe guttata HOM05D006850 ORTHO05D008545 2.8e-76 289.3 248 56.0
ECA238G2187 Erigeron canadensis HOM05D006850 ORTHO05D008545 1.8e-75 286.6 206 64.6
Sopen01g004290 Solanum pennellii HOM05D006850 ORTHO05D008545 1.8e-75 286.6 235 58.7
SGA_v2.0_scaffold29G12238 Striga asiatica HOM05D006850 ORTHO05D008545 9.1e-75 284.3 236 57.2
Solyc01g008780.3 Solanum lycopersicum HOM05D006850 ORTHO05D008545 1.2e-74 283.9 235 57.9
BcaC07g38376 Brassica carinata HOM05D006850 ORTHO05D008545 1.6e-74 283.5 236 58.1
C08p11310 Brassica napus HOM05D006850 ORTHO05D008545 1.6e-74 283.5 236 58.1
TAR633G0745 Trochodendron aralioides HOM05D006850 ORTHO05D008545 4.5e-74 282.0 220 58.6
Sed0015967 Sechium edule HOM05D006850 ORTHO05D008545 5.9e-74 281.6 253 54.5
Manes.01G178500 Manihot esculenta HOM05D006850 ORTHO05D008545 1.0e-73 280.8 215 61.4
Sed0010964 Sechium edule HOM05D006850 ORTHO05D008545 1.0e-73 280.8 247 55.9
PGSC0003DMG400022716 Solanum tuberosum HOM05D006850 ORTHO05D008545 1.0e-73 280.8 235 57.0
CAN.G64.14 Capsicum annuum HOM05D006850 ORTHO05D008545 3.2e-72 275.8 266 52.6
PSO339G1255 Papaver somniferum HOM05D006850 ORTHO05D008545 4.2e-72 275.4 239 58.2
PSO384G2311 Papaver somniferum HOM05D006850 ORTHO05D008545 4.2e-72 275.4 239 58.2
SalBow6G2930 Salvia bowleyana HOM05D006850 ORTHO05D008545 2.1e-71 273.1 233 56.2
Thecc.09G248000 Theobroma cacao HOM05D006850 ORTHO05D008545 6.8e-70 268.1 201 63.7
Aqoxy1G00367 Aquilegia oxysepala HOM05D006850 ORTHO05D008545 3.4e-69 265.8 257 49.8
BolC8t48803H Brassica oleracea HOM05D006850 ORTHO05D008545 4.4e-69 265.4 236 55.9
FAN16G3159 Fragaria x ananassa HOM05D006850 ORTHO05D008545 4.4e-69 265.4 249 55.0
FAN21G1525 Fragaria x ananassa HOM05D006850 ORTHO05D008545 4.4e-69 265.4 249 55.0
FAN25G3781 Fragaria x ananassa HOM05D006850 ORTHO05D008545 4.4e-69 265.4 249 55.0
FvH4_3g27811 Fragaria vesca HOM05D006850 ORTHO05D008545 7.5e-69 264.6 249 55.0
COL.COLO4_32765 Corchorus olitorius HOM05D006850 ORTHO05D008545 1.3e-68 263.8 180 66.1
Nitab4.5_0003488g0060 Nicotiana tabacum HOM05D006850 ORTHO05D008545 2.8e-68 262.7 235 55.3
A08p19760 Brassica napus HOM05D004115 ORTHO05D008545 3.7e-68 262.3 180 67.8
BraA08t33936Z Brassica rapa HOM05D004115 ORTHO05D008545 3.7e-68 262.3 180 67.8
unitig_0.g300 Utricularia gibba HOM05D006850 ORTHO05D008545 9.2e-67 257.7 227 55.1
Nitab4.5_0000718g0310 Nicotiana tabacum HOM05D006850 ORTHO05D008545 1.6e-66 256.9 223 57.4
Nn7g36731 Nelumbo nucifera HOM05D006850 ORTHO05D008545 2.7e-66 256.1 205 60.5
MBI07_g26873_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 1.6e-63 246.9 234 53.4
A01p08930 Brassica napus HOM05D004115 ORTHO05D005004 4.7e-63 245.4 208 57.7
BraA01t00839Z Brassica rapa HOM05D004115 ORTHO05D005004 4.7e-63 245.4 208 57.7
MBI07_g21930_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 6.8e-62 241.5 234 52.6
ATR0745G042 Amborella trichopoda HOM05D006850 ORTHO05D008545 3.7e-60 235.7 236 50.0
CDE09G0720 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 1.7e-57 226.9 125 76.0
Lj1P279T21 Lonicera japonica HOM05D006850 ORTHO05D008545 2.1e-55 219.9 162 63.0
CDE08G0294 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 2.3e-54 216.5 140 67.1
SHI34292 Sapria himalayana HOM05D006850 ORTHO05D008545 5.8e-53 211.8 168 60.1
HPP92_025151 Vanilla planifolia HOM05D006850 ORTHO05D008545 5.8e-53 211.8 132 72.7
SEGI_38632 Sequoiadendron giganteum HOM05D006850 ORTHO05D008545 1.7e-49 200.3 160 56.2
BcaB03g12596 Brassica carinata HOM05D006850 ORTHO05D008545 6.2e-47 191.8 236 46.6
Mapoly0002s0074 Marchantia polymorpha HOM05D006850 ORTHO05D008545 2.0e-37 160.2 121 58.7
Pp3c9_17190 Physcomitrium patens HOM05D006850 ORTHO05D008545 4.4e-37 159.1 144 51.4
Pp3c15_13470 Physcomitrium patens HOM05D006850 ORTHO05D008545 1.9e-35 153.7 125 56.0
SMO145G0227 Selaginella moellendorffii HOM05D006850 ORTHO05D008545 2.3e-33 146.7 83 68.7
CBR_g29725 Chara braunii HOM05D006850 ORTHO05D008545 8.4e-28 128.3 78 62.8
HPP92_025149 Vanilla planifolia HOM05D006850 ORTHO05D008545 1.1e-27 127.9 90 66.7
Actinidia13010 Actinidia chinensis HOM05D006850 ORTHO05D008545 4.3e-16 89.4 186 34.9
TPR.G24411 Trifolium pratense HOM05D006850 ORTHO05D412140 1.0e-09 68.2 46 73.9


User provided reference genes

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