Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s3104g0160 Pisum sativum HOM05D007892 ORTHO05D009211 1.6e-256 889.4 466 100.0
Medtr2g078660 Medicago truncatula HOM05D007892 ORTHO05D009211 1.3e-176 624.0 476 73.5
Ca_03530_v3 Cicer arietinum L. HOM05D007892 ORTHO05D009211 9.1e-151 538.1 485 64.9
Lj3g0007189 Lotus japonicus HOM05D007892 ORTHO05D009211 9.5e-124 448.4 478 57.9
Lalb_Chr01g0016751 Lupinus albus HOM05D007892 ORTHO05D009211 2.4e-111 407.1 489 53.4
arahy.Tifrunner.gnm1.ann1.8Q202K Arachis hypogaea HOM05D007892 ORTHO05D009211 6.0e-86 322.8 486 47.1
Glyma.13G273900 Glycine max HOM05D007892 ORTHO05D009211 5.1e-85 319.7 471 46.1
Glyma.12G226900 Glycine max HOM05D007892 ORTHO05D009211 9.0e-82 308.9 469 46.7
VMungo0331G1677 Vigna mungo HOM05D007892 ORTHO05D009211 7.4e-68 262.7 466 42.5
Phvul.010G112300 Phaseolus vulgaris HOM05D007892 ORTHO05D009211 3.1e-66 257.3 460 42.6
Psat0s5292g0040 Pisum sativum HOM05D001175 ORTHO05D001594 3.1e-42 177.6 115 83.5
Cfa020559 Carpinus fangiana HOM05D007892 ORTHO05D009211 6.8e-37 159.8 477 34.8
Haze_09454 Corylus avellana HOM05D007892 ORTHO05D009211 1.2e-33 149.1 477 33.3
COL.COLO4_36713 Corchorus olitorius HOM05D007892 ORTHO05D009211 1.5e-31 142.1 479 34.4
arahy.Tifrunner.gnm1.ann1.N2Q107 Arachis hypogaea HOM05D007892 ORTHO05D009211 3.3e-31 141.0 233 43.8
CiPaw.11G172000 Carya illinoinensis HOM05D007892 ORTHO05D009211 6.8e-29 133.3 498 33.5
Thecc.07G095700 Theobroma cacao HOM05D007892 ORTHO05D009211 1.5e-28 132.1 483 32.5
MD11G1252600 Malus domestica HOM05D007892 ORTHO05D009211 2.2e-27 128.3 477 29.6
Dinv20199 Davidia involucrata HOM05D007892 ORTHO05D009211 8.3e-27 126.3 483 32.7
Manes.15G089300 Manihot esculenta HOM05D007892 ORTHO05D009211 9.2e-26 122.9 481 31.2
TAR626G1218 Trochodendron aralioides HOM05D007892 ORTHO05D009211 1.2e-25 122.5 504 29.0
MD03G1231500 Malus domestica HOM05D007892 ORTHO05D009211 1.6e-25 122.1 477 30.2
QL08p022727 Quercus lobata HOM05D007892 ORTHO05D009211 5.9e-25 120.2 502 31.5
Gohir.D01G048000 Gossypium hirsutum HOM05D007892 ORTHO05D009211 2.3e-24 118.2 480 30.2
GSVIVG01014294001 Vitis vinifera HOM05D007892 ORTHO05D009211 2.9e-24 117.9 476 31.9
Duzib213G0678 Durio zibethinus HOM05D007892 ORTHO05D009211 8.6e-24 116.3 452 31.0
Prupe.4G176400 Prunus persica HOM05D007892 ORTHO05D009211 1.9e-23 115.2 480 30.6
Duzib268G0896 Durio zibethinus HOM05D007892 ORTHO05D009211 5.6e-23 113.6 535 29.5
Duzib244G0002 Durio zibethinus HOM05D007892 ORTHO05D009211 9.5e-23 112.8 533 29.8
Gorai.002G067800 Gossypium raimondii HOM05D007892 ORTHO05D009211 1.6e-22 112.1 480 30.0
TWI38G1391 Tripterygium wilfordii HOM05D007892 ORTHO05D009211 4.7e-22 110.5 486 28.6
RcHm_v2.0_Chr5g0032741 Rosa chinensis HOM05D007892 ORTHO05D009211 5.2e-21 107.1 437 30.9
Dinv14936 Davidia involucrata HOM05D007892 ORTHO05D009211 2.6e-20 104.8 490 30.2
FAN21G3246 Fragaria x ananassa HOM05D007892 ORTHO05D009211 2.6e-20 104.8 483 30.6
FAN11G1893 Fragaria x ananassa HOM05D007892 ORTHO05D009211 4.4e-20 104.0 486 30.9
FvH4_3g19480 Fragaria vesca HOM05D007892 ORTHO05D009211 5.8e-20 103.6 479 30.5
FAN16G1540 Fragaria x ananassa HOM05D007892 ORTHO05D009211 5.8e-20 103.6 460 30.2
FAN25G2763 Fragaria x ananassa HOM05D007892 ORTHO05D009211 2.9e-19 101.3 487 29.8
TPR.G16985 Trifolium pratense HOM05D007892 ORTHO05D009211 8.3e-19 99.8 66 75.8
CSS0030192 Camellia sinensis var. sinensis HOM05D007892 ORTHO05D009211 1.9e-18 98.6 489 29.9
Atru.chr2.2419 Acer truncatum HOM05D007892 ORTHO05D009211 3.2e-18 97.8 346 30.9
CSS0005747 Camellia sinensis var. sinensis HOM05D007892 ORTHO05D009211 3.2e-18 97.8 489 29.7
CANSAT56G4073 Cannabis sativa HOM05D007892 ORTHO05D009211 9.2e-18 96.3 478 31.0
Gohir.A01G061400 Gossypium hirsutum HOM05D007892 ORTHO05D009211 1.2e-17 95.9 455 27.5
Sed0012696 Sechium edule HOM05D007892 ORTHO05D009211 1.6e-17 95.5 481 27.7
ClCG11G017870 Citrullus lanatus HOM05D007892 ORTHO05D009211 4.6e-17 94.0 482 28.0
Ciclev10007798m.g Citrus clementina HOM05D007892 ORTHO05D009211 8.1e-14 83.2 468 28.8
Sc03g0010140 Simmondsia chinensis HOM05D007892 ORTHO05D009211 5.2e-13 80.5 468 29.1
Actinidia09702 Actinidia chinensis HOM05D007892 ORTHO05D009211 1.5e-12 79.0 464 28.7
Potri.011G115900 Populus trichocarpa HOM05D007892 ORTHO05D009211 2.0e-12 78.6 223 37.7
Lj1A840G45 Lonicera japonica HOM05D007892 ORTHO05D009211 9.8e-12 76.3 210 37.1
Sabra11G0101600 Salix brachista HOM05D007892 ORTHO05D009211 1.3e-11 75.9 217 36.4
Rhsim06G0202400 Rhododendron simsii HOM05D007892 ORTHO05D009211 1.7e-11 75.5 482 26.1
CsaV3_4G033500 Cucumis sativus L. HOM05D007892 ORTHO05D009211 2.2e-11 75.1 404 28.2
Nn1g06449 Nelumbo nucifera HOM05D007892 ORTHO05D009211 2.9e-11 74.7 476 25.2
MELO3C025606.2 Cucumis melo HOM05D007892 ORTHO05D009211 3.7e-11 74.3 483 26.1
Eucgr.F01161 Eucalyptus grandis HOM05D007892 ORTHO05D009211 1.1e-10 72.8 438 27.2
AUR62019468 Chenopodium quinoa HOM05D007892 ORTHO05D009211 1.9e-10 72.0 258 31.0
vmacro11887 Vaccinium macrocarpon HOM05D007892 ORTHO05D009211 1.6e-09 68.9 353 28.6
DCAR_019569 Daucus carota HOM05D007892 ORTHO05D009211 6.0e-09 67.0 496 28.0
Hund22811 Selenicereus undatus HOM05D007892 ORTHO05D009211 1.3e-08 65.9 482 26.1
Nitab4.5_0002330g0130 Nicotiana tabacum HOM05D021138 ORTHO05D009211 3.9e-08 64.3 480 26.0
Potri.001G397001 Populus trichocarpa HOM05D007892 ORTHO05D009211 3.3e-07 61.2 193 35.2
TPR.G7948 Trifolium pratense HOM05D007892 ORTHO05D009211 3.3e-07 61.2 36 88.9
Aqoxy1G02331 Aquilegia oxysepala HOM05D007892 ORTHO05D009211 7.3e-07 60.1 254 31.1


User provided reference genes

Program Settings