Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s3066g0080 Pisum sativum HOM05D006614 ORTHO05D008217 2.0e-278 961.8 489 100.0
Psat2g179000 Pisum sativum HOM05D006614 ORTHO05D008217 1.2e-262 909.4 504 93.3
TPR.G25839 Trifolium pratense HOM05D006614 ORTHO05D008217 1.5e-233 812.8 502 82.7
Medtr5g080700 Medicago truncatula HOM05D006614 ORTHO05D008217 4.1e-228 794.7 499 81.6
Ca_05900_v3 Cicer arietinum L. HOM05D006614 ORTHO05D008217 1.0e-218 763.5 492 80.7
Glyma.14G066300 Glycine max HOM05D006614 ORTHO05D008217 5.8e-198 694.5 508 72.8
Phvul.008G231100 Phaseolus vulgaris HOM05D006614 ORTHO05D008217 6.5e-189 664.5 491 71.1
LjContig00141g0022614 Lotus japonicus HOM05D006614 ORTHO05D008217 4.2e-188 661.8 499 70.3
Lalb_Chr17g0346371 Lupinus albus HOM05D006614 ORTHO05D008217 1.3e-184 650.2 507 66.1
VMungo0647G0674 Vigna mungo HOM05D006614 ORTHO05D008217 1.8e-183 646.4 494 70.0
arahy.Tifrunner.gnm1.ann1.UH0U35 Arachis hypogaea HOM05D006614 ORTHO05D008217 3.9e-178 628.6 513 66.9
arahy.Tifrunner.gnm1.ann1.087IU6 Arachis hypogaea HOM05D006614 ORTHO05D008217 6.7e-178 627.9 504 67.7
DCAR_021025 Daucus carota HOM05D006614 ORTHO05D008217 1.1e-151 540.8 438 61.9
TAR375G0652 Trochodendron aralioides HOM05D006614 ORTHO05D008217 7.7e-150 534.6 435 62.5
PGR142G0467 Punica granatum HOM05D006614 ORTHO05D008217 3.8e-149 532.3 436 63.1
ClCG11G017450 Citrullus lanatus HOM05D006614 ORTHO05D008217 1.5e-148 530.4 436 63.5
HanXRQChr15g0476201 Helianthus annuus HOM05D006614 ORTHO05D008217 2.5e-148 529.6 366 67.5
MELO3C025640.2 Cucumis melo HOM05D006614 ORTHO05D008217 4.7e-147 525.4 442 61.5
CsaV3_4G033120 Cucumis sativus L. HOM05D006614 ORTHO05D008217 4.7e-147 525.4 443 61.2
Migut.M00728 Erythranthe guttata HOM05D006614 ORTHO05D008217 5.2e-146 521.9 378 65.9
Manes.15G094800 Manihot esculenta HOM05D006614 ORTHO05D008217 1.7e-144 516.9 441 61.7
Cpa.g.sc77.8 Carica papaya HOM05D006614 ORTHO05D008217 2.2e-144 516.5 423 61.2
Hma1.2p1_0290F.1_g114840 Hydrangea macrophylla HOM05D006614 ORTHO05D008217 6.3e-144 515.0 445 58.7
TWI38G0322 Tripterygium wilfordii HOM05D006614 ORTHO05D008217 6.3e-144 515.0 420 61.7
GSVIVG01014198001 Vitis vinifera HOM05D006614 ORTHO05D008217 1.1e-143 514.2 439 60.4
FAN16G2994 Fragaria x ananassa HOM05D006614 ORTHO05D008217 2.4e-143 513.1 491 55.4
FvH4_3g18290 Fragaria vesca HOM05D006614 ORTHO05D008217 3.1e-143 512.7 491 56.8
Sed0001562 Sechium edule HOM05D006614 ORTHO05D008217 3.1e-143 512.7 446 60.5
Actinidia12578 Actinidia chinensis HOM05D006614 ORTHO05D008217 5.4e-143 511.9 379 63.1
FAN11G1715 Fragaria x ananassa HOM05D006614 ORTHO05D008217 7.0e-143 511.5 491 55.2
Hma1.2p1_0290F.1_g114830 Hydrangea macrophylla HOM05D006614 ORTHO05D008217 9.1e-143 511.1 434 59.7
CSS0027020 Camellia sinensis var. sinensis HOM05D006614 ORTHO05D008217 2.0e-142 510.0 437 60.2
CiPaw.11G160300 Carya illinoinensis HOM05D006614 ORTHO05D008217 3.5e-142 509.2 367 66.2
Sc16g0007600 Simmondsia chinensis HOM05D006614 ORTHO05D008217 3.5e-142 509.2 428 61.2
Prupe.4G164700 Prunus persica HOM05D006614 ORTHO05D008217 5.9e-142 508.4 427 60.7
MD03G1243600 Malus domestica HOM05D006614 ORTHO05D008217 7.7e-142 508.1 433 60.0
CANSAT35G1108 Cannabis sativa HOM05D006614 ORTHO05D008217 3.8e-141 505.8 433 59.8
Rhsim06G0208100 Rhododendron simsii HOM05D006614 ORTHO05D008217 3.8e-141 505.8 374 64.7
THA.LOC104822565 Tarenaya hassleriana HOM05D006614 ORTHO05D008217 1.5e-140 503.8 493 58.0
Thecc.07G117000 Theobroma cacao HOM05D006614 ORTHO05D008217 1.5e-140 503.8 370 65.4
C05p52250 Brassica napus HOM05D006614 ORTHO05D008217 1.9e-140 503.4 444 58.6
PSO421G0295 Papaver somniferum HOM05D006614 ORTHO05D008217 1.9e-140 503.4 417 60.9
COL.COLO4_17543 Corchorus olitorius HOM05D006614 ORTHO05D008217 2.5e-140 503.1 418 60.8
Lj1P829T27 Lonicera japonica HOM05D006614 ORTHO05D008217 2.5e-140 503.1 386 63.7
A05p34510 Brassica napus HOM05D006614 ORTHO05D008217 4.2e-140 502.3 437 59.0
BraA05t22271Z Brassica rapa HOM05D006614 ORTHO05D008217 4.2e-140 502.3 437 59.0
Dinv14994 Davidia involucrata HOM05D006614 ORTHO05D008217 5.5e-140 501.9 455 58.0
PSO063G1163 Papaver somniferum HOM05D006614 ORTHO05D008217 1.2e-139 500.7 433 58.7
RcHm_v2.0_Chr5g0030921 Rosa chinensis HOM05D006614 ORTHO05D008217 1.2e-139 500.7 493 57.6
AT3G14900 Arabidopsis thaliana HOM05D006614 ORTHO05D008217 2.7e-139 499.6 381 64.0
Duzib213G0629 Durio zibethinus HOM05D006614 ORTHO05D008217 3.6e-139 499.2 370 65.4
Carub.0003s1456 Capsella rubella HOM05D006614 ORTHO05D008217 4.7e-139 498.8 381 64.6
Aa31LG8G2110 Aethionema arabicum HOM05D006614 ORTHO05D008217 6.1e-139 498.4 382 63.4
BolC5t33914H Brassica oleracea HOM05D006614 ORTHO05D008217 1.4e-138 497.3 438 58.9
AL3G27220 Arabidopsis lyrata HOM05D006614 ORTHO05D008217 1.8e-138 496.9 381 64.3
Gohir.D07G233600 Gossypium hirsutum HOM05D006614 ORTHO05D008217 1.8e-138 496.9 373 64.3
Peaxi162Scf00111g01423 Petunia axillaris HOM05D006614 ORTHO05D008217 1.8e-138 496.9 445 58.4
vmacro23466 Vaccinium macrocarpon HOM05D006614 ORTHO05D008217 2.3e-138 496.5 382 64.1
Cc05_g11080 Coffea canephora HOM05D006614 ORTHO05D008217 3.0e-138 496.1 452 58.6
Gohir.A07G226400 Gossypium hirsutum HOM05D006614 ORTHO05D008217 3.0e-138 496.1 373 64.3
unitig_747.g21586 Utricularia gibba HOM05D006614 ORTHO05D008217 3.0e-138 496.1 377 63.4
Gorai.001G269000 Gossypium raimondii HOM05D006614 ORTHO05D008217 4.0e-138 495.7 373 64.3
Potri.001G390600 Populus trichocarpa HOM05D006614 ORTHO05D008217 4.0e-138 495.7 377 62.6
Nitab4.5_0006953g0010 Nicotiana tabacum HOM05D006614 ORTHO05D008217 1.2e-137 494.2 436 58.9
Sp3g13110 Schrenkiella parvula HOM05D006614 ORTHO05D008217 1.2e-137 494.2 377 65.0
BcaB06g25331 Brassica carinata HOM05D006614 ORTHO05D008217 3.4e-137 492.7 443 57.8
Thhalv10022322m.g Eutrema salsugineum HOM05D006614 ORTHO05D008217 1.3e-136 490.7 376 64.1
MSTRG.6677 Avicennia marina HOM05D006614 ORTHO05D008217 1.4e-135 487.3 436 59.2
ECA240G1555 Erigeron canadensis HOM05D006614 ORTHO05D008217 1.4e-135 487.3 429 58.0
Nitab4.5_0003565g0010 Nicotiana tabacum HOM05D006614 ORTHO05D008217 1.4e-135 487.3 441 57.8
BcaB06g29517 Brassica carinata HOM05D006614 ORTHO05D008217 1.8e-135 486.9 385 62.1
Haze_09323 Corylus avellana HOM05D006614 ORTHO05D008217 1.8e-135 486.9 412 59.5
EL10Ac8g18445 Beta vulgaris HOM05D006614 ORTHO05D008217 4.1e-135 485.7 432 57.2
Aqoxy1G00012 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 2.7e-134 483.0 438 57.3
Ah.09g230960 Amaranthus hybridus HOM05D006614 ORTHO05D008217 4.5e-134 482.3 426 58.0
CDE12G0873 Ceratophyllum demersum HOM05D006614 ORTHO05D008217 7.7e-134 481.5 429 60.6
SalBow5G0223 Salvia bowleyana HOM05D006614 ORTHO05D008217 7.7e-134 481.5 427 57.4
QL12p002313 Quercus lobata HOM05D006614 ORTHO05D008217 5.0e-133 478.8 375 61.6
Cfa019566 Carpinus fangiana HOM05D006614 ORTHO05D008217 8.6e-133 478.0 366 62.3
SGA_v2.0_scaffold34G13782 Striga asiatica HOM05D006614 ORTHO05D008217 1.9e-132 476.9 437 58.1
Thecc.07G116400 Theobroma cacao HOM05D006614 ORTHO05D008217 2.5e-132 476.5 345 65.2
Sopen07g030680 Solanum pennellii HOM05D006614 ORTHO05D008217 1.6e-131 473.8 368 62.5
PGSC0003DMG400046940 Solanum tuberosum HOM05D006614 ORTHO05D008217 1.6e-131 473.8 368 62.2
Solyc07g062440.1 Solanum lycopersicum HOM05D006614 ORTHO05D008217 3.6e-131 472.6 368 62.2
Sabra16G0256000 Salix brachista HOM05D006614 ORTHO05D008217 1.0e-130 471.1 344 64.2
CAN.G375.15 Capsicum annuum HOM05D006614 ORTHO05D008217 1.4e-130 470.7 435 55.9
CARHR089840 Cardamine hirsuta HOM05D006614 ORTHO05D008217 4.0e-130 469.2 384 61.7
AUR62021467 Chenopodium quinoa HOM05D006614 ORTHO05D008217 1.5e-129 467.2 345 64.3
Atru.chr2.2145 Acer truncatum HOM05D006614 ORTHO05D008217 6.4e-128 461.8 382 58.9
Oeu061358.1 Olea europaea HOM05D006614 ORTHO05D008217 7.0e-127 458.4 363 62.3
AUR62010952 Chenopodium quinoa HOM05D006614 ORTHO05D008217 5.6e-124 448.7 455 53.4
MBI12_g10753_MAGBIO Magnolia biondii HOM05D006614 ORTHO05D008217 1.8e-122 443.7 308 69.2
HPP92_015867 Vanilla planifolia HOM05D006614 ORTHO05D008217 3.1e-122 443.0 373 59.0
vmacro11940 Vaccinium macrocarpon HOM05D006614 ORTHO05D008217 1.4e-119 434.1 409 55.3
FAN25G0567 Fragaria x ananassa HOM05D006614 ORTHO05D008217 1.5e-116 424.1 463 52.1
Zm00001eb078480 Zea mays HOM05D006614 ORTHO05D008217 2.7e-110 403.3 376 52.4
ATR0810G004 Amborella trichopoda HOM05D006614 ORTHO05D008217 1.5e-108 397.5 373 52.0
Os04g0497900 Oryza sativa ssp. japonica HOM05D006614 ORTHO05D008217 3.3e-108 396.4 367 53.4
Eucgr.K01881 Eucalyptus grandis HOM05D006614 ORTHO05D008217 6.6e-101 372.1 345 55.7
Aqoxy3G00116 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 3.5e-86 323.2 241 63.5
Glyma.02G250300 Glycine max HOM05D006614 ORTHO05D008217 1.4e-74 284.6 230 70.4
SEGI_22211 Sequoiadendron giganteum HOM05D006614 ORTHO05D008217 8.2e-59 232.3 409 34.0
Ciclev10023881m.g Citrus clementina HOM05D006614 ORTHO05D008217 2.4e-58 230.7 168 68.5
SMO356G0760 Selaginella moellendorffii HOM05D006614 ORTHO05D008217 2.7e-38 164.1 266 34.2
SMO356G0609 Selaginella moellendorffii HOM05D006614 ORTHO05D008217 4.7e-38 163.3 277 34.3
AagrBONN_evm.TU.Sc2ySwM_228.5094 Anthoceros agrestis HOM05D006614 ORTHO05D008217 2.0e-36 157.9 266 35.0
Mapoly0097s0086 Marchantia polymorpha HOM05D006614 ORTHO05D008217 5.3e-34 149.8 292 29.8
Pp3c16_3160 Physcomitrium patens HOM05D006614 ORTHO05D008217 7.0e-34 149.4 384 30.2
Cfa009322 Carpinus fangiana HOM05D006614 ORTHO05D008217 1.1e-31 142.1 121 57.9
Dinv02793 Davidia involucrata HOM05D006614 ORTHO05D008217 1.2e-25 122.1 93 66.7
Cfa001947 Carpinus fangiana HOM05D006614 ORTHO05D008217 1.3e-24 118.6 83 67.5
MD11G1263800 Malus domestica HOM05D006614 ORTHO05D008217 3.4e-20 104.0 90 54.4
HPP92_015860 Vanilla planifolia HOM05D006614 ORTHO05D008217 3.7e-19 100.5 69 65.2
Aqoxy3G00115 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 1.3e-16 92.0 125 48.8
CBR_g47994 Chara braunii HOM05D006614 ORTHO05D008217 5.4e-10 70.1 242 26.0


User provided reference genes

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