Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s3019g0080 Pisum sativum HOM05D006114 ORTHO05D007609 4.0e-127 458.0 214 100.0
Ca_27292_v3 Cicer arietinum L. HOM05D006114 ORTHO05D007609 9.6e-105 383.6 215 86.0
Medtr6g034935 Medicago truncatula HOM05D006114 ORTHO05D007609 3.4e-102 375.2 218 83.0
Lj2g0010896 Lotus japonicus HOM05D006114 ORTHO05D007609 3.7e-96 355.1 217 77.9
Lalb_Chr19g0130321 Lupinus albus HOM05D006114 ORTHO05D007609 2.1e-91 339.3 219 76.3
VMungo0464G2055 Vigna mungo HOM05D006114 ORTHO05D007609 2.5e-89 332.4 217 73.7
Phvul.004G097500 Phaseolus vulgaris HOM05D006114 ORTHO05D007609 5.7e-89 331.3 214 74.3
Hund26709 Selenicereus undatus HOM05D006114 ORTHO05D000105 3.1e-87 325.5 222 68.0
Prupe.8G025000 Prunus persica HOM05D006114 ORTHO05D007609 3.4e-86 322.0 215 73.0
RcHm_v2.0_Chr6g0276341 Rosa chinensis HOM05D006114 ORTHO05D007609 4.5e-86 321.6 215 71.6
MD10G1022100 Malus domestica HOM05D006114 ORTHO05D007609 7.7e-86 320.9 215 71.2
MD05G1021300 Malus domestica HOM05D006114 ORTHO05D007609 1.0e-85 320.5 215 71.6
Haze_17740 Corylus avellana HOM05D006114 ORTHO05D007609 2.2e-85 319.3 217 71.4
CSS0028797 Camellia sinensis var. sinensis HOM05D006114 ORTHO05D007609 5.0e-85 318.2 215 68.4
Lj7A371T45 Lonicera japonica HOM05D006114 ORTHO05D007609 5.0e-85 318.2 215 69.3
Cfa018335 Carpinus fangiana HOM05D006114 ORTHO05D007609 8.5e-85 317.4 215 71.6
CANSAT25G1256 Cannabis sativa HOM05D006114 ORTHO05D007609 1.9e-84 316.2 214 72.0
TAR381G1603 Trochodendron aralioides HOM05D006114 ORTHO05D007609 4.2e-84 315.1 215 69.8
Dinv41097 Davidia involucrata HOM05D006114 ORTHO05D007609 7.2e-84 314.3 203 71.4
Medtr6g049050 Medicago truncatula HOM05D006114 ORTHO05D007609 1.2e-83 313.5 215 71.2
Actinidia15143 Actinidia chinensis HOM05D006114 ORTHO05D007609 2.1e-83 312.8 215 67.9
Ciclev10001576m.g Citrus clementina HOM05D006114 ORTHO05D007609 3.6e-83 312.0 218 70.2
FvH4_2g14200 Fragaria vesca HOM05D006114 ORTHO05D007609 3.6e-83 312.0 217 71.0
Nn1g06119 Nelumbo nucifera HOM05D006114 ORTHO05D007609 3.6e-83 312.0 215 67.9
TPR.G36696 Trifolium pratense HOM05D006114 ORTHO05D007609 4.6e-83 311.6 163 90.2
EL10Ac7g15790 Beta vulgaris HOM05D006114 ORTHO05D007609 1.0e-82 310.5 215 67.0
Hma1.2p1_0616F.1_g190010 Hydrangea macrophylla HOM05D006114 ORTHO05D007609 1.0e-82 310.5 210 70.5
TAR625G1556 Trochodendron aralioides HOM05D006114 ORTHO05D007609 1.0e-82 310.5 215 67.9
AUR62039242 Chenopodium quinoa HOM05D006114 ORTHO05D007609 1.4e-82 310.1 224 66.5
FAN15G0766 Fragaria x ananassa HOM05D006114 ORTHO05D007609 3.0e-82 308.9 217 70.0
CiPaw.16G014300 Carya illinoinensis HOM05D006114 ORTHO05D007609 3.9e-82 308.5 218 70.6
Glyma.02G083400 Glycine max HOM05D006114 ORTHO05D007609 8.8e-82 307.4 219 71.2
Sed0024386 Sechium edule HOM05D006114 ORTHO05D007609 2.0e-81 306.2 213 69.0
PSO675G2834 Papaver somniferum HOM05D006114 ORTHO05D007609 7.4e-81 304.3 215 65.6
Sabra02G0054600 Salix brachista HOM05D006114 ORTHO05D007609 7.4e-81 304.3 216 68.1
Aqoxy5G02132 Aquilegia oxysepala HOM05D006114 ORTHO05D007609 1.3e-80 303.5 215 65.6
QL02p024207 Quercus lobata HOM05D006114 ORTHO05D007609 1.3e-80 303.5 214 69.6
Ah.08g215970 Amaranthus hybridus HOM05D006114 ORTHO05D007609 1.7e-80 303.1 216 67.1
Cpa.g.sc21.182 Carica papaya HOM05D006114 ORTHO05D007609 1.7e-80 303.1 212 70.3
Eucgr.F02716 Eucalyptus grandis HOM05D006114 ORTHO05D007609 2.8e-80 302.4 217 66.4
PSO541G3056 Papaver somniferum HOM05D006114 ORTHO05D007609 3.7e-80 302.0 215 64.7
FAN27G1342 Fragaria x ananassa HOM05D006114 ORTHO05D007609 6.3e-80 301.2 205 71.2
Lsat_1_v5_gn_1_8460 Lactuca sativa HOM05D006114 ORTHO05D007609 8.2e-80 300.8 215 66.5
Atru.chr13.2189 Acer truncatum HOM05D006114 ORTHO05D007609 1.4e-79 300.1 216 65.7
Rhsim05G0182400 Rhododendron simsii HOM05D006114 ORTHO05D007609 1.8e-79 299.7 217 69.6
Solyc04g071130.1 Solanum lycopersicum HOM05D006114 ORTHO05D007609 2.4e-79 299.3 215 65.6
Sopen04g027070 Solanum pennellii HOM05D006114 ORTHO05D007609 2.4e-79 299.3 215 65.6
Nitab4.5_0006608g0010 Nicotiana tabacum HOM05D006114 ORTHO05D007609 3.1e-79 298.9 215 65.6
TWI34G0188 Tripterygium wilfordii HOM05D006114 ORTHO05D007609 3.1e-79 298.9 217 66.8
PGSC0003DMG400000797 Solanum tuberosum HOM05D006114 ORTHO05D007609 4.1e-79 298.5 215 65.1
AUR62009796 Chenopodium quinoa HOM05D006114 ORTHO05D007609 5.3e-79 298.1 197 70.1
HanXRQChr02g0039921 Helianthus annuus HOM05D006114 ORTHO05D007609 6.9e-79 297.7 215 67.0
ECA247G0840 Erigeron canadensis HOM05D006114 ORTHO05D007609 9.1e-79 297.4 217 65.4
TWI32G1226 Tripterygium wilfordii HOM05D006114 ORTHO05D007609 9.1e-79 297.4 218 66.5
CAN.G175.3 Capsicum annuum HOM05D006114 ORTHO05D007609 1.2e-78 297.0 215 65.6
DCAR_010096 Daucus carota HOM05D006114 ORTHO05D007609 1.5e-78 296.6 215 68.4
PGR042G1057 Punica granatum HOM05D006114 ORTHO05D007609 4.5e-78 295.0 219 67.6
PGR122G0006 Punica granatum HOM05D006114 ORTHO05D007609 4.5e-78 295.0 219 67.6
FAN24G0263 Fragaria x ananassa HOM05D006114 ORTHO05D007609 1.0e-77 293.9 205 70.2
Peaxi162Scf00263g01414 Petunia axillaris HOM05D006114 ORTHO05D007609 2.9e-77 292.4 213 66.7
Potri.002G069900 Populus trichocarpa HOM05D006114 ORTHO05D007609 5.0e-77 291.6 216 65.7
Potri.005G190400 Populus trichocarpa HOM05D006114 ORTHO05D007609 8.5e-77 290.8 214 65.9
Manes.02G177800 Manihot esculenta HOM05D006114 ORTHO05D007609 1.9e-76 289.7 238 61.8
Nitab4.5_0000032g0440 Nicotiana tabacum HOM05D006114 ORTHO05D007609 2.7e-75 285.8 208 64.4
Carub.0002s2378 Capsella rubella HOM05D006114 ORTHO05D007609 7.9e-75 284.3 217 65.4
SpUn0346_0010 Schrenkiella parvula HOM05D006114 ORTHO05D007609 7.9e-75 284.3 217 65.4
AT1G76920 Arabidopsis thaliana HOM05D006114 ORTHO05D007609 1.0e-74 283.9 217 65.0
Migut.C01010 Erythranthe guttata HOM05D006114 ORTHO05D007609 1.0e-74 283.9 226 58.8
AL2G37050 Arabidopsis lyrata HOM05D006114 ORTHO05D007609 1.8e-74 283.1 217 65.0
COL.COLO4_24672 Corchorus olitorius HOM05D006114 ORTHO05D007609 1.8e-74 283.1 221 63.3
BcaB02g07084 Brassica carinata HOM05D006114 ORTHO05D007609 8.8e-74 280.8 213 66.2
BcaB05g25019 Brassica carinata HOM05D006114 ORTHO05D007609 8.8e-74 280.8 212 65.6
BcaC08g45501 Brassica carinata HOM05D006114 ORTHO05D007609 8.8e-74 280.8 212 66.5
C06p31720 Brassica napus HOM05D006114 ORTHO05D007609 8.8e-74 280.8 212 66.5
BolC6t38302H Brassica oleracea HOM05D006114 ORTHO05D007609 8.8e-74 280.8 212 66.5
BraA07t30466Z Brassica rapa HOM05D006114 ORTHO05D007609 8.8e-74 280.8 212 66.5
A07p28250 Brassica napus HOM05D006114 ORTHO05D007609 2.0e-73 279.6 212 66.0
Duzib116G0820 Durio zibethinus HOM05D006114 ORTHO05D007609 2.0e-73 279.6 219 62.6
Cc10_g14550 Coffea canephora HOM05D006114 ORTHO05D007609 2.6e-73 279.3 219 62.6
THA.LOC104812044 Tarenaya hassleriana HOM05D006114 ORTHO05D007609 2.6e-73 279.3 217 63.1
MBI17_g34067_MAGBIO Magnolia biondii HOM05D006114 ORTHO05D007609 3.3e-73 278.9 217 63.1
Thhalv10019824m.g Eutrema salsugineum HOM05D006114 ORTHO05D007609 4.4e-73 278.5 212 65.1
Oeu032982.1 Olea europaea HOM05D006114 ORTHO05D007609 5.7e-73 278.1 225 58.7
SalBow7G1400 Salvia bowleyana HOM05D006114 ORTHO05D007609 2.2e-72 276.2 214 61.2
Aa31LG4G6950 Aethionema arabicum HOM05D006114 ORTHO05D007609 2.8e-72 275.8 217 63.6
MSTRG.1356 Avicennia marina HOM05D006114 ORTHO05D007609 4.8e-72 275.0 224 58.5
Duzib041G0274 Durio zibethinus HOM05D006114 ORTHO05D007609 1.1e-71 273.9 219 62.1
Gohir.D05G271900 Gossypium hirsutum HOM05D006114 ORTHO05D007609 1.1e-71 273.9 221 61.5
Gorai.009G284900 Gossypium raimondii HOM05D006114 ORTHO05D007609 1.1e-71 273.9 221 61.5
THA.LOC104813707 Tarenaya hassleriana HOM05D006114 ORTHO05D007609 1.1e-71 273.9 217 61.8
Gohir.A05G269900 Gossypium hirsutum HOM05D006114 ORTHO05D007609 1.8e-71 273.1 221 61.1
Sed0010814 Sechium edule HOM05D006114 ORTHO05D007609 1.8e-71 273.1 216 63.9
Thecc.08G149100 Theobroma cacao HOM05D006114 ORTHO05D007609 1.8e-71 273.1 221 62.0
MSTRG.22368 Avicennia marina HOM05D006114 ORTHO05D007609 4.2e-68 261.9 223 58.7
unitig_749.g13920 Utricularia gibba HOM05D006114 ORTHO05D007609 5.2e-66 255.0 225 55.1
Zm00001eb434300 Zea mays HOM05D006114 ORTHO05D007609 8.2e-64 247.7 234 51.7
Os04g0686700 Oryza sativa ssp. japonica HOM05D006114 ORTHO05D007609 4.5e-62 241.9 235 51.9
Lj7A371T46 Lonicera japonica HOM05D006114 ORTHO05D007609 2.9e-61 239.2 215 55.3
HPP92_009302 Vanilla planifolia HOM05D006114 ORTHO05D007609 1.6e-59 233.4 224 54.5
Zm00001eb076050 Zea mays HOM05D006114 ORTHO05D007609 3.1e-55 219.2 218 50.0
SGA_v2.0_scaffold48G17978 Striga asiatica HOM05D006114 ORTHO05D007609 5.2e-50 201.8 145 62.1
GSVIVG01034899001 Vitis vinifera HOM05D006114 ORTHO05D007609 7.0e-47 191.4 215 49.3
Zm00001eb268540 Zea mays HOM05D006114 ORTHO05D007609 4.5e-46 188.7 186 50.0
CARHR070420 Cardamine hirsuta HOM05D006114 ORTHO05D007609 7.7e-46 188.0 139 67.6
AUR62009795 Chenopodium quinoa HOM05D006114 ORTHO05D007609 1.8e-39 166.8 207 42.5
AUR62039241 Chenopodium quinoa HOM05D006114 ORTHO05D007609 5.4e-39 165.2 204 44.1
SEGI_30218 Sequoiadendron giganteum HOM05D006114 ORTHO05D007609 2.0e-38 163.3 185 42.7
Migut.N03218 Erythranthe guttata HOM05D006114 ORTHO05D007609 1.3e-37 160.6 227 40.1
Oeu046020.2 Olea europaea HOM05D006114 ORTHO05D007609 1.9e-36 156.8 224 42.4
unitig_26.g9903 Utricularia gibba HOM05D006114 ORTHO05D007609 2.1e-35 153.3 111 62.2
Zm00001eb182860 Zea mays HOM05D006114 ORTHO05D007609 7.3e-28 128.3 146 43.2
ATR0772G199 Amborella trichopoda HOM05D006114 ORTHO05D007609 2.1e-22 110.2 176 39.8
Zm00001eb346130 Zea mays HOM05D003599 ORTHO05D004221 2.1e-22 110.2 93 58.1
Zm00001eb243390 Zea mays HOM05D006114 ORTHO05D007609 2.8e-19 99.8 95 51.6
Zm00001eb268560 Zea mays HOM05D006114 ORTHO05D007609 6.2e-19 98.6 104 45.2
Zm00001eb080990 Zea mays HOM05D006114 ORTHO05D007609 4.4e-17 92.4 77 54.5
unitig_26.g9904 Utricularia gibba HOM05D006114 ORTHO05D007609 1.1e-15 87.8 93 49.5
Zm00001eb080980 Zea mays HOM05D006114 ORTHO05D007609 5.4e-15 85.5 103 39.8
arahy.Tifrunner.gnm1.ann1.0BPN3L Arachis hypogaea HOM05D000034 ORTHO05D000037 1.7e-13 80.5 58 62.1
CDE08G0205 Ceratophyllum demersum HOM05D006114 ORTHO05D007609 3.1e-10 69.7 47 68.1
Zm00001eb268570 Zea mays HOM05D006114 ORTHO05D007609 8.9e-10 68.2 63 52.4
FAN14G0378 Fragaria x ananassa HOM05D006114 ORTHO05D007609 2.0e-09 67.0 53 66.0
VMungo1383G2819 Vigna mungo HOM05D006114 ORTHO05D007609 3.4e-09 66.2 57 59.6
FvH4_6g34680 Fragaria vesca HOM05D006114 ORTHO05D007609 9.9e-09 64.7 54 66.7


User provided reference genes

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