Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s2953g0080 Pisum sativum HOM05D000535 ORTHO05D000427 9.1e-92 340.1 160 100.0
Psat0s2953g0040 Pisum sativum HOM05D000535 ORTHO05D000427 1.1e-55 220.3 151 75.5
Psat0s2953g0120 Pisum sativum HOM05D000535 ORTHO05D000427 2.2e-53 212.6 153 71.9
TPR.G5828 Trifolium pratense HOM05D000535 ORTHO05D000427 4.7e-48 194.9 155 62.6
Medtr6g059730 Medicago truncatula HOM05D000535 ORTHO05D000427 9.9e-46 187.2 155 61.9
Ca_25239_v3 Cicer arietinum L. HOM05D000535 ORTHO05D000427 7.3e-41 171.0 155 58.1
Psat1g112520 Pisum sativum HOM05D000535 ORTHO05D000427 7.3e-33 144.4 157 50.3
Medtr6g059680 Medicago truncatula HOM05D000535 ORTHO05D000427 1.6e-32 143.3 158 50.6
Lj2g0020121 Lotus japonicus HOM05D000535 ORTHO05D000427 2.4e-31 139.4 141 51.1
Glyma.09G155500 Glycine max HOM05D000535 ORTHO05D000427 1.5e-30 136.7 160 50.6
arahy.Tifrunner.gnm1.ann1.9N9F55 Arachis hypogaea HOM05D000535 ORTHO05D000427 2.4e-28 129.4 147 46.9
Phvul.004G129600 Phaseolus vulgaris HOM05D000535 ORTHO05D000427 9.3e-28 127.5 160 49.4
VMungo0464G1579 Vigna mungo HOM05D000535 ORTHO05D000427 4.6e-27 125.2 160 48.8
Lalb_Chr01g0008701 Lupinus albus HOM05D000535 ORTHO05D000427 1.0e-26 124.0 158 46.8
arahy.Tifrunner.gnm1.ann1.U2UX9Q Arachis hypogaea HOM05D000535 ORTHO05D000427 5.1e-26 121.7 147 44.9
TPR.G5811 Trifolium pratense HOM05D000535 ORTHO05D000427 4.0e-23 112.1 161 43.5
Phvul.004G129900 Phaseolus vulgaris HOM05D000535 ORTHO05D000427 9.0e-23 110.9 160 44.4
Phvul.004G129800 Phaseolus vulgaris HOM05D000535 ORTHO05D000427 2.9e-21 105.9 186 39.8
Medtr6g009650 Medicago truncatula HOM05D000535 ORTHO05D000427 9.3e-20 100.9 149 41.6
Medtr6g009563 Medicago truncatula HOM05D000535 ORTHO05D000427 2.1e-19 99.8 149 42.3
Phvul.004G129500 Phaseolus vulgaris HOM05D000535 ORTHO05D000427 8.7e-18 94.4 161 41.6
Psat1g112600 Pisum sativum HOM05D000535 ORTHO05D000427 3.3e-17 92.4 138 42.8
Medtr6g066190 Medicago truncatula HOM05D000535 ORTHO05D000427 9.6e-17 90.9 144 39.6
Psat1g116360 Pisum sativum HOM05D000535 ORTHO05D000427 9.6e-17 90.9 141 39.0
Phvul.004G130000 Phaseolus vulgaris HOM05D000535 ORTHO05D000427 1.6e-16 90.1 81 56.8
Ca_28260_v3 Cicer arietinum L. HOM05D000535 ORTHO05D000427 8.2e-16 87.8 134 41.8
TPR.G8847 Trifolium pratense HOM05D000535 ORTHO05D000427 8.2e-16 87.8 149 36.2
Phvul.004G129700 Phaseolus vulgaris HOM05D000535 ORTHO05D000427 1.1e-15 87.4 130 44.6
Psat0s2953g0160 Pisum sativum HOM05D000535 ORTHO05D000427 2.4e-15 86.3 160 36.9
VMungo0464G2067 Vigna mungo HOM05D000535 ORTHO05D000427 2.4e-15 86.3 150 44.0
Lj2g0028248 Lotus japonicus HOM05D000535 ORTHO05D000427 4.0e-15 85.5 153 42.5
TPR.G5846 Trifolium pratense HOM05D000535 ORTHO05D000427 5.3e-15 85.1 190 33.2
Medtr1g035770 Medicago truncatula HOM05D000535 ORTHO05D000427 4.5e-14 82.0 145 36.6
TPR.G8844 Trifolium pratense HOM05D000535 ORTHO05D000427 4.5e-14 82.0 154 33.1
Medtr6g059650 Medicago truncatula HOM05D000535 ORTHO05D000427 3.8e-13 79.0 146 39.7
Medtr6g059410 Medicago truncatula HOM05D000535 ORTHO05D000427 4.9e-13 78.6 147 37.4
Medtr6g059530 Medicago truncatula HOM05D000535 ORTHO05D000427 4.9e-13 78.6 147 38.1
Medtr6g065460 Medicago truncatula HOM05D000535 ORTHO05D000427 6.5e-13 78.2 149 37.6
Ca_26737_v3 Cicer arietinum L. HOM05D000535 ORTHO05D000427 1.1e-12 77.4 145 35.9
Medtr6g066210 Medicago truncatula HOM05D000535 ORTHO05D000427 1.4e-12 77.0 146 34.9
Medtr6g059810 Medicago truncatula HOM05D000535 ORTHO05D000427 7.1e-12 74.7 85 42.4
Phvul.004G130500 Phaseolus vulgaris HOM05D000535 ORTHO05D000427 2.7e-11 72.8 141 31.9
VMungo0464G1632 Vigna mungo HOM05D000535 ORTHO05D000427 6.1e-11 71.6 120 40.0
Medtr3g463590 Medicago truncatula HOM05D000535 ORTHO05D000427 1.3e-10 70.5 143 37.8
Lj2g0009599 Lotus japonicus HOM05D000535 ORTHO05D000427 2.3e-10 69.7 161 38.5
Phvul.004G130400 Phaseolus vulgaris HOM05D000535 ORTHO05D000427 2.3e-10 69.7 139 38.8
VMungo0464G0329 Vigna mungo HOM05D000535 ORTHO05D000427 5.1e-10 68.6 156 34.0
Psat0s4676g0040 Pisum sativum HOM05D000535 ORTHO05D000427 1.9e-09 66.6 85 45.9
VMungo0464G1990 Vigna mungo HOM05D000535 ORTHO05D000427 3.3e-09 65.9 136 38.2
vmacro18604 Vaccinium macrocarpon HOM05D000535 ORTHO05D000427 7.4e-09 64.7 147 32.0
Medtr6g017225 Medicago truncatula HOM05D000535 ORTHO05D000427 1.3e-08 63.9 163 33.7
Glyma.16G206300 Glycine max HOM05D000535 ORTHO05D000427 1.6e-08 63.5 85 49.4
Gohir.A05G392100 Gossypium hirsutum HOM05D000535 ORTHO05D000427 1.6e-08 63.5 149 34.9
Gohir.D04G025000 Gossypium hirsutum HOM05D000535 ORTHO05D000427 1.6e-08 63.5 149 34.9
Gorai.012G027600 Gossypium raimondii HOM05D000535 ORTHO05D000427 1.6e-08 63.5 149 34.9
Duzib128G1043 Durio zibethinus HOM05D000535 ORTHO05D000427 2.2e-08 63.2 149 34.2
AL2G33060 Arabidopsis lyrata HOM05D000535 ORTHO05D000427 2.8e-08 62.8 153 31.4
Potri.004G067900 Populus trichocarpa HOM05D000535 ORTHO05D000427 3.7e-08 62.4 151 29.8
SGA_v2.0_scaffold25G10739 Striga asiatica HOM05D000535 ORTHO05D000427 3.7e-08 62.4 148 33.1
DCAR_011413 Daucus carota HOM05D000535 ORTHO05D000427 4.8e-08 62.0 147 38.8
Glyma.16G206100 Glycine max HOM05D000535 ORTHO05D000427 4.8e-08 62.0 85 44.7
Medtr6g059760 Medicago truncatula HOM05D000535 ORTHO05D000427 4.8e-08 62.0 158 34.2
Sabra04G0045700 Salix brachista HOM05D000535 ORTHO05D000427 8.2e-08 61.2 149 29.5
SalBow5G3210 Salvia bowleyana HOM05D000535 ORTHO05D000427 1.1e-07 60.8 145 32.4
Rhsim08G0010200 Rhododendron simsii HOM05D000535 ORTHO05D000427 1.4e-07 60.5 141 31.2
SalBow5G1184 Salvia bowleyana HOM05D000535 ORTHO05D000427 1.4e-07 60.5 145 33.1
Glyma.09G163900 Glycine max HOM05D000535 ORTHO05D000427 2.4e-07 59.7 143 29.4
Phvul.004G138500 Phaseolus vulgaris HOM05D000535 ORTHO05D000427 2.4e-07 59.7 145 29.7
arahy.Tifrunner.gnm1.ann1.TZ4EFW Arachis hypogaea HOM05D000535 ORTHO05D011300 4.1e-07 58.9 143 32.2
Glyma.16G212500 Glycine max HOM05D000535 ORTHO05D000427 4.1e-07 58.9 143 29.4
Sabra04G0045300 Salix brachista HOM05D000535 ORTHO05D000427 5.3e-07 58.5 147 35.4
Atru.chr10.1154 Acer truncatum HOM05D000535 ORTHO05D000427 6.9e-07 58.2 146 32.9
AT1G17860 Arabidopsis thaliana HOM05D000535 ORTHO05D000427 6.9e-07 58.2 128 36.7
arahy.Tifrunner.gnm1.ann1.L4PC56 Arachis hypogaea HOM05D013217 ORTHO05D000427 6.9e-07 58.2 71 49.3
COL.COLO4_08721 Corchorus olitorius HOM05D000535 ORTHO05D000427 6.9e-07 58.2 149 32.2
Duzib128G0529 Durio zibethinus HOM05D000535 ORTHO05D000427 6.9e-07 58.2 133 33.8
Lj5g0017298 Lotus japonicus HOM05D000535 ORTHO05D000427 6.9e-07 58.2 145 31.0
Nitab4.5_0010672g0010 Nicotiana tabacum HOM05D000535 ORTHO05D000427 6.9e-07 58.2 127 37.0
Thecc.05G198000 Theobroma cacao HOM05D000535 ORTHO05D000427 6.9e-07 58.2 133 34.6
GSVIVG01012922001 Vitis vinifera HOM05D000535 ORTHO05D000427 6.9e-07 58.2 144 33.3
Aa31LG4G3560 Aethionema arabicum HOM05D000535 ORTHO05D000427 1.2e-06 57.4 142 28.9
Sabra17G0126000 Salix brachista HOM05D000535 ORTHO05D000427 1.5e-06 57.0 160 31.9
arahy.Tifrunner.gnm1.ann1.91JQUG Arachis hypogaea HOM05D000535 ORTHO05D000427 2.0e-06 56.6 59 50.8
Dinv04609 Davidia involucrata HOM05D000535 ORTHO05D000427 2.0e-06 56.6 148 31.8
Atru.chr10.1140 Acer truncatum HOM05D000535 ORTHO05D000427 5.9e-06 55.1 146 32.2
Atru.chr10.1153 Acer truncatum HOM05D000535 ORTHO05D000427 5.9e-06 55.1 146 32.2
CARHR018480 Cardamine hirsuta HOM05D000535 ORTHO05D000427 1.0e-05 54.3 128 34.4


User provided reference genes

Program Settings