Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s2878g0120 Pisum sativum HOM05D006069 ORTHO05D008101 1.1e-59 233.0 116 100.0
Medtr3g113620 Medicago truncatula HOM05D006069 ORTHO05D008101 5.9e-40 167.5 116 72.4
VMungo0647G0980 Vigna mungo HOM05D006069 ORTHO05D008101 1.4e-33 146.4 112 67.0
Phvul.001G005300 Phaseolus vulgaris HOM05D006069 ORTHO05D008101 2.4e-33 145.6 112 67.0
Ca_00837_v3 Cicer arietinum L. HOM05D006069 ORTHO05D008101 3.1e-33 145.2 106 66.0
Lalb_Chr19g0131451 Lupinus albus HOM05D006069 ORTHO05D008101 1.3e-31 139.8 107 65.4
Glyma.14G219800 Glycine max HOM05D006069 ORTHO05D008101 3.8e-31 138.3 110 65.5
arahy.Tifrunner.gnm1.ann1.LEZM1J Arachis hypogaea HOM05D006069 ORTHO05D008101 2.5e-30 135.6 110 63.6
CANSAT25G1864 Cannabis sativa HOM05D006069 ORTHO05D008101 4.2e-30 134.8 113 63.7
Lalb_Chr01g0008621 Lupinus albus HOM05D006069 ORTHO05D008101 4.2e-30 134.8 111 63.1
Lalb_Chr03g0033431 Lupinus albus HOM05D006069 ORTHO05D008101 1.2e-29 133.3 108 65.7
Ciclev10002907m.g Citrus clementina HOM05D006069 ORTHO05D008101 1.0e-28 130.2 107 60.7
Thecc.08G047500 Theobroma cacao HOM05D006069 ORTHO05D008101 1.0e-28 130.2 108 63.0
Duzib041G0459 Durio zibethinus HOM05D006069 ORTHO05D008101 3.9e-28 128.3 108 62.0
Cfa013967 Carpinus fangiana HOM05D006069 ORTHO05D008101 6.7e-28 127.5 116 61.2
COL.COLO4_26120 Corchorus olitorius HOM05D006069 ORTHO05D008101 8.8e-28 127.1 107 59.8
TAR625G1525 Trochodendron aralioides HOM05D006069 ORTHO05D008101 1.1e-27 126.7 106 63.2
Haze_22650 Corylus avellana HOM05D003905 ORTHO05D005329 2.0e-27 125.9 116 60.3
Potri.005G241200 Populus trichocarpa HOM05D006069 ORTHO05D008101 2.0e-27 125.9 105 63.8
Atru.chr13.270 Acer truncatum HOM05D006069 ORTHO05D008101 2.6e-27 125.6 109 58.7
Haze_22649 Corylus avellana HOM05D006069 ORTHO05D008101 2.6e-27 125.6 106 62.3
Sabra05G0186700 Salix brachista HOM05D006069 ORTHO05D008101 2.6e-27 125.6 105 63.8
Sp5g30930 Schrenkiella parvula HOM05D006069 ORTHO05D008101 3.3e-27 125.2 115 58.3
MD08G1011100 Malus domestica HOM05D006069 ORTHO05D008101 4.4e-27 124.8 108 63.9
MD15G1011100 Malus domestica HOM05D006069 ORTHO05D008101 5.7e-27 124.4 107 63.6
Cfa013969 Carpinus fangiana HOM05D006069 ORTHO05D008101 9.7e-27 123.6 106 61.3
AL2G35800 Arabidopsis lyrata HOM05D006069 ORTHO05D008101 1.3e-26 123.2 119 57.1
Eucgr.H00971 Eucalyptus grandis HOM05D006069 ORTHO05D008101 1.3e-26 123.2 111 59.5
Duzib093G2212 Durio zibethinus HOM05D006069 ORTHO05D008101 1.7e-26 122.9 108 61.1
Thhalv10019558m.g Eutrema salsugineum HOM05D006069 ORTHO05D008101 1.7e-26 122.9 115 57.4
Sabra02G0016400 Salix brachista HOM05D006069 ORTHO05D008101 1.7e-26 122.9 105 62.9
AT1G75810 Arabidopsis thaliana HOM05D006069 ORTHO05D008101 3.7e-26 121.7 119 56.3
Gohir.D05G258200 Gossypium hirsutum HOM05D006069 ORTHO05D008101 3.7e-26 121.7 107 57.9
Gorai.009G269500 Gossypium raimondii HOM05D006069 ORTHO05D008101 3.7e-26 121.7 107 57.9
Potri.002G020200 Populus trichocarpa HOM05D006069 ORTHO05D008101 3.7e-26 121.7 106 61.3
BcaC03g15627 Brassica carinata HOM05D006069 ORTHO05D008101 4.8e-26 121.3 117 56.4
C02p33660 Brassica napus HOM05D006069 ORTHO05D008101 4.8e-26 121.3 117 56.4
BolC2t09338H Brassica oleracea HOM05D006069 ORTHO05D008101 4.8e-26 121.3 117 56.4
FvH4_2g38290 Fragaria vesca HOM05D006069 ORTHO05D008101 4.8e-26 121.3 107 61.7
Hma1.2p1_0733F.1_g210300 Hydrangea macrophylla HOM05D006069 ORTHO05D008101 4.8e-26 121.3 105 60.0
Manes.18G012400 Manihot esculenta HOM05D006069 ORTHO05D008101 4.8e-26 121.3 105 61.9
BcaB05g24944 Brassica carinata HOM05D006069 ORTHO05D008101 6.3e-26 120.9 120 54.2
BraA02t07058Z Brassica rapa HOM05D006069 ORTHO05D008101 6.3e-26 120.9 117 55.6
Gohir.A06G002300 Gossypium hirsutum HOM05D006069 ORTHO05D008101 6.3e-26 120.9 110 60.0
CSS0019530 Camellia sinensis var. sinensis HOM05D006069 ORTHO05D008101 1.1e-25 120.2 106 59.4
CiPaw.07G148400 Carya illinoinensis HOM05D006069 ORTHO05D008101 1.1e-25 120.2 106 62.3
Gohir.A05G256400 Gossypium hirsutum HOM05D006069 ORTHO05D008101 1.1e-25 120.2 107 57.0
Prupe.1G363800 Prunus persica HOM05D006069 ORTHO05D008101 1.1e-25 120.2 107 60.7
Gohir.D06G005300 Gossypium hirsutum HOM05D006069 ORTHO05D008101 1.8e-25 119.4 110 59.1
Gorai.010G002500 Gossypium raimondii HOM05D006069 ORTHO05D008101 1.8e-25 119.4 110 59.1
RcHm_v2.0_Chr6g0303091 Rosa chinensis HOM05D006069 ORTHO05D008101 1.8e-25 119.4 107 60.7
TWI56G0900 Tripterygium wilfordii HOM05D006069 ORTHO05D008101 1.8e-25 119.4 107 57.0
A02p20240 Brassica napus HOM05D006069 ORTHO05D008101 3.1e-25 118.6 117 53.8
Nn6g32021 Nelumbo nucifera HOM05D006069 ORTHO05D008101 3.1e-25 118.6 106 58.5
Cpa.g.c46170 Carica papaya HOM05D006069 ORTHO05D008101 4.1e-25 118.2 107 57.0
Cpa.g.sc64.165 Carica papaya HOM05D006069 ORTHO05D008101 4.1e-25 118.2 107 57.0
Migut.N03168 Erythranthe guttata HOM05D006069 ORTHO05D008101 4.1e-25 118.2 108 53.7
FAN15G3329 Fragaria x ananassa HOM05D006069 ORTHO05D008101 4.1e-25 118.2 107 59.8
Lalb_Chr23g0266111 Lupinus albus HOM05D006069 ORTHO05D008101 4.1e-25 118.2 113 56.6
TWI12G0868 Tripterygium wilfordii HOM05D006069 ORTHO05D008101 4.1e-25 118.2 107 57.9
Glyma.17G258800 Glycine max HOM05D006069 ORTHO05D008101 5.3e-25 117.9 104 60.6
VMungo1309G1320 Vigna mungo HOM05D006069 ORTHO05D008101 5.3e-25 117.9 107 57.0
DCAR_013877 Daucus carota HOM05D006069 ORTHO05D000038 7.0e-25 117.5 105 56.2
FAN27G3260 Fragaria x ananassa HOM05D006069 ORTHO05D008101 7.0e-25 117.5 107 59.8
Aa31LG4G6010 Aethionema arabicum HOM05D006069 ORTHO05D008101 9.1e-25 117.1 114 55.3
PGR031G1000 Punica granatum HOM05D006069 ORTHO05D008101 9.1e-25 117.1 106 60.4
QL02p011928 Quercus lobata HOM05D006069 ORTHO05D008101 1.6e-24 116.3 107 59.8
QL11p034297 Quercus lobata HOM05D006069 ORTHO05D008101 1.6e-24 116.3 107 59.8
Glyma.06G023700 Glycine max HOM05D006069 ORTHO05D008101 2.0e-24 115.9 107 53.3
Oeu061972.1 Olea europaea HOM05D006069 ORTHO05D008101 2.0e-24 115.9 106 56.6
Sc02g0008640 Simmondsia chinensis HOM05D006069 ORTHO05D008101 2.0e-24 115.9 106 57.5
Manes.05G145900 Manihot esculenta HOM05D006069 ORTHO05D008101 3.5e-24 115.2 98 62.2
PGSC0003DMG400021511 Solanum tuberosum HOM05D006069 ORTHO05D008101 3.5e-24 115.2 113 54.0
SalBow8G0098 Salvia bowleyana HOM05D006069 ORTHO05D008101 5.9e-24 114.4 106 56.6
THA.LOC104811416 Tarenaya hassleriana HOM05D006069 ORTHO05D008101 5.9e-24 114.4 111 55.9
Nitab4.5_0000934g0080 Nicotiana tabacum HOM05D006069 ORTHO05D008101 7.7e-24 114.0 122 53.3
Solyc04g078060.1 Solanum lycopersicum HOM05D006069 ORTHO05D008101 7.7e-24 114.0 113 53.1
Sopen04g031650 Solanum pennellii HOM05D006069 ORTHO05D008101 1.0e-23 113.6 113 53.1
Nitab4.5_0000569g0030 Nicotiana tabacum HOM05D006069 ORTHO05D008101 1.3e-23 113.2 106 51.9
Oeu014170.1 Olea europaea HOM05D006069 ORTHO05D008101 1.3e-23 113.2 106 55.7
Lsat_1_v5_gn_0_33081 Lactuca sativa HOM05D006069 ORTHO05D008101 1.7e-23 112.8 109 56.0
Dinv31861 Davidia involucrata HOM05D006069 ORTHO05D000038 2.2e-23 112.5 103 59.2
Sc15g0004900 Simmondsia chinensis HOM05D006069 ORTHO05D008101 2.9e-23 112.1 112 53.6
Carub.0002s2266 Capsella rubella HOM05D006069 ORTHO05D008101 3.8e-23 111.7 115 52.2
BcaC08g47325 Brassica carinata HOM05D006069 ORTHO05D008101 8.5e-23 110.5 117 53.8
BolC6t40015H Brassica oleracea HOM05D006069 ORTHO05D008101 8.5e-23 110.5 117 53.8
EL10Ac1g02174 Beta vulgaris HOM05D006069 ORTHO05D008101 1.1e-22 110.2 112 54.5
Oeu054481.1 Olea europaea HOM05D006069 ORTHO05D008101 1.1e-22 110.2 109 54.1
C06p49760 Brassica napus HOM05D006069 ORTHO05D008101 1.5e-22 109.8 115 51.3
SGA_v2.0_scaffold11G05937 Striga asiatica HOM05D006069 ORTHO05D008101 1.5e-22 109.8 105 55.2
AUR62041483 Chenopodium quinoa HOM05D006069 ORTHO05D008101 1.9e-22 109.4 112 53.6
Duzib116G0547 Durio zibethinus HOM05D006069 ORTHO05D008101 1.9e-22 109.4 99 57.6
Nitab4.5_0007809g0010 Nicotiana tabacum HOM05D006069 ORTHO05D008101 1.9e-22 109.4 106 50.9
BcaC08g47069 Brassica carinata HOM05D006069 ORTHO05D008101 3.2e-22 108.6 116 51.7
Medtr1g025490 Medicago truncatula HOM05D006069 ORTHO05D008101 3.2e-22 108.6 106 54.7
BcaC08g47066 Brassica carinata HOM05D006069 ORTHO05D008101 4.2e-22 108.2 122 51.6
DCAR_016725 Daucus carota HOM05D006069 ORTHO05D008101 5.5e-22 107.8 106 50.9
SalBow7G4587 Salvia bowleyana HOM05D006069 ORTHO05D008101 9.4e-22 107.1 104 52.9
PGSC0003DMG400011549 Solanum tuberosum HOM05D006069 ORTHO05D008101 9.4e-22 107.1 116 50.0
CARHR069230 Cardamine hirsuta HOM05D006069 ORTHO05D008101 1.2e-21 106.7 117 49.6
Actinidia16995 Actinidia chinensis HOM05D006069 ORTHO05D006669 2.1e-21 105.9 109 50.5
arahy.Tifrunner.gnm1.ann1.Q2AYB8 Arachis hypogaea HOM05D006069 ORTHO05D008101 2.7e-21 105.5 111 52.3
Sopen12g030410 Solanum pennellii HOM05D006069 ORTHO05D008101 2.7e-21 105.5 113 48.7
unitig_82.g27107 Utricularia gibba HOM05D006069 ORTHO05D008101 4.7e-21 104.8 105 50.5
Lsat_1_v5_gn_8_29900 Lactuca sativa HOM05D006069 ORTHO05D008101 2.3e-20 102.4 106 51.9
unitig_747.g21531 Utricularia gibba HOM05D006069 ORTHO05D008101 2.3e-20 102.4 106 52.8
arahy.Tifrunner.gnm1.ann1.KJD857 Arachis hypogaea HOM05D006069 ORTHO05D008101 4.0e-20 101.7 111 51.4
Phvul.009G017800 Phaseolus vulgaris HOM05D006069 ORTHO05D008101 4.0e-20 101.7 98 52.0
SGA_v2.0_scaffold47G17498 Striga asiatica HOM05D006069 ORTHO05D008101 4.0e-20 101.7 106 50.9
Ah.00g000260 Amaranthus hybridus HOM05D006069 ORTHO05D008101 5.2e-20 101.3 111 51.4
Psat6g002280 Pisum sativum HOM05D006069 ORTHO05D008101 5.2e-20 101.3 118 46.6
Peaxi162Scf00081g00135 Petunia axillaris HOM05D002628 ORTHO05D008101 6.8e-20 100.9 105 48.6
THA.LOC104805018 Tarenaya hassleriana HOM05D006069 ORTHO05D008101 8.8e-20 100.5 113 51.3
Actinidia15431 Actinidia chinensis HOM05D006069 ORTHO05D008101 2.6e-19 99.0 108 49.1
HanXRQChr13g0387231 Helianthus annuus HOM05D006069 ORTHO05D008101 2.6e-19 99.0 109 47.7
ECA233G2757 Erigeron canadensis HOM05D006069 ORTHO05D008101 4.4e-19 98.2 93 52.7
Lalb_Chr11g0061821 Lupinus albus HOM05D006069 ORTHO05D008101 7.5e-19 97.4 113 52.2
Migut.C00852 Erythranthe guttata HOM05D006069 ORTHO05D008101 2.8e-18 95.5 98 51.0
Rhsim06G0020100 Rhododendron simsii HOM05D006069 ORTHO05D008101 8.3e-18 94.0 92 52.2
PSO700G0183 Papaver somniferum HOM05D006069 ORTHO05D008101 4.1e-17 91.7 118 43.2
PSO170G3064 Papaver somniferum HOM05D006069 ORTHO05D008101 7.0e-17 90.9 113 43.4
Aqoxy5G01811 Aquilegia oxysepala HOM05D006069 ORTHO05D008101 9.1e-17 90.5 111 45.9
Nitab4.5_0003228g0030 Nicotiana tabacum HOM05D006069 ORTHO05D008101 1.6e-16 89.7 106 48.1
Peaxi162Scf00160g00114 Petunia axillaris HOM05D006069 ORTHO05D008101 3.2e-14 82.0 111 42.3
Dinv26438 Davidia involucrata HOM05D006069 ORTHO05D008101 2.0e-11 72.8 82 50.0
AUR62040543 Chenopodium quinoa HOM05D006069 ORTHO05D009490 1.4e-09 66.6 61 57.4
A07p41340 Brassica napus HOM05D006069 ORTHO05D032697 2.3e-07 59.3 70 45.7


User provided reference genes

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