Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s2855g0120 Pisum sativum HOM05D002169 ORTHO05D020691 7.1e-44 180.3 94 100.0
Psat4g104600 Pisum sativum HOM05D002169 ORTHO05D006577 4.3e-41 171.0 93 95.7
Glyma.06G143500 Glycine max HOM05D002169 ORTHO05D006577 6.9e-39 163.7 93 91.4
Lj4g0016756 Lotus japonicus HOM05D002169 ORTHO05D006577 7.6e-38 160.2 93 89.2
TPR.G13725 Trifolium pratense HOM05D002169 ORTHO05D006577 7.6e-38 160.2 93 88.2
Glyma.04G221900 Glycine max HOM05D002169 ORTHO05D006577 4.9e-37 157.5 93 88.2
Medtr8g073170 Medicago truncatula HOM05D002169 ORTHO05D006577 6.4e-37 157.1 93 86.0
arahy.Tifrunner.gnm1.ann1.L3E9Q0 Arachis hypogaea HOM05D002169 ORTHO05D006577 1.4e-36 156.0 93 88.2
Ca_02844_v3 Cicer arietinum L. HOM05D002169 ORTHO05D006577 5.4e-36 154.1 93 83.9
arahy.Tifrunner.gnm1.ann1.DGN8CB Arachis hypogaea HOM05D002169 ORTHO05D006577 7.1e-36 153.7 93 86.0
Haze_03631 Corylus avellana HOM05D002169 ORTHO05D006577 1.6e-35 152.5 93 83.9
CiPaw.07G001100 Carya illinoinensis HOM05D002169 ORTHO05D006577 2.7e-35 151.8 93 83.9
Phvul.009G142600 Phaseolus vulgaris HOM05D002169 ORTHO05D006577 6.0e-35 150.6 94 83.0
Sc10g0009280 Simmondsia chinensis HOM05D002169 ORTHO05D006577 1.0e-34 149.8 93 82.8
QL06p053209 Quercus lobata HOM05D002169 ORTHO05D006577 5.1e-34 147.5 93 80.6
Lalb_Chr10g0097551 Lupinus albus HOM05D002169 ORTHO05D006577 8.7e-34 146.7 93 80.6
Actinidia17335 Actinidia chinensis HOM05D002169 ORTHO05D006577 1.5e-33 146.0 93 79.6
vmacro20619 Vaccinium macrocarpon HOM05D002169 ORTHO05D006577 3.3e-33 144.8 93 78.5
Dinv40201 Davidia involucrata HOM05D002169 ORTHO05D006577 9.6e-33 143.3 93 79.6
PGR004G0941 Punica granatum HOM05D002169 ORTHO05D006577 1.3e-32 142.9 93 76.3
MSTRG.3634 Avicennia marina HOM05D002169 ORTHO05D006577 1.6e-32 142.5 93 78.5
Rhsim10G0192800 Rhododendron simsii HOM05D002169 ORTHO05D006577 1.6e-32 142.5 93 77.4
Actinidia22888 Actinidia chinensis HOM05D002169 ORTHO05D006577 2.1e-32 142.1 93 76.3
EL10Ac6g15040 Beta vulgaris HOM05D002169 ORTHO05D006577 2.1e-32 142.1 93 79.6
CSS0008574 Camellia sinensis var. sinensis HOM05D002169 ORTHO05D006577 3.7e-32 141.4 93 77.4
Sed0000096 Sechium edule HOM05D002169 ORTHO05D006577 3.7e-32 141.4 93 79.6
Hund19690 Selenicereus undatus HOM05D002169 ORTHO05D006577 4.8e-32 141.0 93 74.2
MD15G1229000 Malus domestica HOM05D002169 ORTHO05D006577 6.2e-32 140.6 93 76.3
Oeu012456.1 Olea europaea HOM05D002169 ORTHO05D006577 8.1e-32 140.2 93 78.5
CSS0019965 Camellia sinensis var. sinensis HOM05D002169 ORTHO05D006577 1.4e-31 139.4 93 77.4
MELO3C018432.2 Cucumis melo HOM05D002169 ORTHO05D006577 1.4e-31 139.4 93 78.5
CsaV3_7G008800 Cucumis sativus L. HOM05D002169 ORTHO05D006577 1.4e-31 139.4 93 78.5
GSVIVG01022300001 Vitis vinifera HOM05D002169 ORTHO05D006577 1.4e-31 139.4 93 78.5
Migut.L00778 Erythranthe guttata HOM05D002169 ORTHO05D006577 1.8e-31 139.0 93 77.4
MD02G1113900 Malus domestica HOM05D002169 ORTHO05D006577 2.4e-31 138.7 93 75.3
Aqoxy6G01571 Aquilegia oxysepala HOM05D002169 ORTHO05D006577 3.1e-31 138.3 93 77.4
Prupe.7G185100 Prunus persica HOM05D002169 ORTHO05D006577 3.1e-31 138.3 93 76.3
RcHm_v2.0_Chr2g0096961 Rosa chinensis HOM05D002169 ORTHO05D006577 3.1e-31 138.3 93 73.1
ClCG02G005730 Citrullus lanatus HOM05D002169 ORTHO05D006577 4.0e-31 137.9 93 77.4
Dinv28311 Davidia involucrata HOM05D002169 ORTHO05D006577 4.0e-31 137.9 93 76.3
Eucgr.J00205 Eucalyptus grandis HOM05D002169 ORTHO05D006577 4.0e-31 137.9 94 74.5
Cfa007098 Carpinus fangiana HOM05D002169 ORTHO05D006577 9.0e-31 136.7 93 78.5
CDE06G1921 Ceratophyllum demersum HOM05D002169 ORTHO05D006577 9.0e-31 136.7 93 77.4
TAR381G0949 Trochodendron aralioides HOM05D002169 ORTHO05D006577 9.0e-31 136.7 93 77.4
SGA_v2.0_scaffold132G34513 Striga asiatica HOM05D002169 ORTHO05D006577 1.2e-30 136.3 93 74.2
Lsat_1_v5_gn_2_73920 Lactuca sativa HOM05D002169 ORTHO05D006577 2.0e-30 135.6 93 77.4
Cc07_g12000 Coffea canephora HOM05D002169 ORTHO05D006577 2.6e-30 135.2 93 71.0
HanXRQChr14g0443111 Helianthus annuus HOM05D002169 ORTHO05D006577 2.6e-30 135.2 93 74.2
SGA_v2.0_scaffold14G07128 Striga asiatica HOM05D002169 ORTHO05D006577 3.4e-30 134.8 93 74.2
Lj4A238G77 Lonicera japonica HOM05D002169 ORTHO05D006577 4.5e-30 134.4 93 75.3
Hma1.2p1_0085F.1_g044520 Hydrangea macrophylla HOM05D002169 ORTHO05D006577 5.8e-30 134.0 93 75.3
CANSAT64G0090 Cannabis sativa HOM05D002169 ORTHO05D006577 7.6e-30 133.7 94 73.4
DCAR_019080 Daucus carota HOM05D002169 ORTHO05D006577 7.6e-30 133.7 93 72.0
Manes.01G156500 Manihot esculenta HOM05D002169 ORTHO05D006577 4.9e-29 131.0 93 72.0
FvH4_1g10170 Fragaria vesca HOM05D002169 ORTHO05D006577 8.4e-29 130.2 93 68.8
FAN23G0161 Fragaria x ananassa HOM05D002169 ORTHO05D006577 1.1e-28 129.8 93 68.8
FAN23G2634 Fragaria x ananassa HOM05D002169 ORTHO05D006577 1.1e-28 129.8 93 68.8
FAN26G1091 Fragaria x ananassa HOM05D002169 ORTHO05D006577 1.4e-28 129.4 93 68.8
Cpa.g.sc6.358 Carica papaya HOM05D002169 ORTHO05D006577 1.9e-28 129.0 93 77.4
ECA238G3790 Erigeron canadensis HOM05D002169 ORTHO05D006577 1.9e-28 129.0 93 72.0
AUR62016565 Chenopodium quinoa HOM05D002169 ORTHO05D006577 5.5e-28 127.5 93 76.3
Ciclev10024818m.g Citrus clementina HOM05D002169 ORTHO05D006577 5.5e-28 127.5 93 74.2
ATR0807G141 Amborella trichopoda HOM05D002169 ORTHO05D006577 1.6e-27 125.9 93 69.9
AUR62003736 Chenopodium quinoa HOM05D002169 ORTHO05D006577 3.5e-27 124.8 93 75.3
Peaxi162Scf00040g03136 Petunia axillaris HOM05D002169 ORTHO05D006577 1.3e-26 122.9 93 65.6
Nitab4.5_0008533g0010 Nicotiana tabacum HOM05D002169 ORTHO05D006577 1.8e-26 122.5 94 68.1
THA.LOC104819712 Tarenaya hassleriana HOM05D002169 ORTHO05D006577 1.8e-26 122.5 93 72.0
Sabra07G0050400 Salix brachista HOM05D002169 ORTHO05D006577 2.3e-26 122.1 94 70.2
FAN19G1591 Fragaria x ananassa HOM05D002169 ORTHO05D006577 3.0e-26 121.7 104 61.5
AT2G17510 Arabidopsis thaliana HOM05D002169 ORTHO05D006577 3.9e-26 121.3 93 72.0
Cfa013486 Carpinus fangiana HOM05D002169 ORTHO05D006577 3.9e-26 121.3 84 75.0
Nitab4.5_0001467g0120 Nicotiana tabacum HOM05D002169 ORTHO05D006577 3.9e-26 121.3 94 67.0
AL3G50440 Arabidopsis lyrata HOM05D002169 ORTHO05D006577 6.7e-26 120.6 93 72.0
Potri.007G059100 Populus trichocarpa HOM05D002169 ORTHO05D006577 6.7e-26 120.6 94 68.1
CARHR107670 Cardamine hirsuta HOM05D002169 ORTHO05D006577 1.1e-25 119.8 93 71.0
Carub.0003s3157 Capsella rubella HOM05D002169 ORTHO05D006577 1.5e-25 119.4 93 71.0
unitig_747.g21786 Utricularia gibba HOM05D002169 ORTHO05D006577 1.5e-25 119.4 93 69.9
BcaB07g31725 Brassica carinata HOM05D002169 ORTHO05D006577 1.9e-25 119.0 93 69.9
BcaC04g22967 Brassica carinata HOM05D002169 ORTHO05D006577 1.9e-25 119.0 93 69.9
A09p11420 Brassica napus HOM05D002169 ORTHO05D006577 1.9e-25 119.0 93 69.9
C09p13440 Brassica napus HOM05D002169 ORTHO05D006577 1.9e-25 119.0 93 69.9
BolC9t54234H Brassica oleracea HOM05D002169 ORTHO05D006577 1.9e-25 119.0 93 69.9
BraA09t36782Z Brassica rapa HOM05D002169 ORTHO05D006577 1.9e-25 119.0 93 69.9
Thhalv10022534m.g Eutrema salsugineum HOM05D002169 ORTHO05D006577 2.5e-25 118.6 93 69.9
Os03g0129200 Oryza sativa ssp. japonica HOM05D002169 ORTHO05D006577 3.3e-25 118.2 93 66.7
Pp3c16_17530 Physcomitrium patens HOM05D002169 ORTHO05D006577 3.3e-25 118.2 92 66.3
Zm00001eb002260 Zea mays HOM05D002169 ORTHO05D006577 3.3e-25 118.2 94 67.0
ECA238G0185 Erigeron canadensis HOM05D000109 ORTHO05D000520 5.6e-25 117.5 90 67.8
Medtr6g049200 Medicago truncatula HOM05D002169 ORTHO05D020691 5.6e-25 117.5 74 81.1
Zm00001eb330250 Zea mays HOM05D002169 ORTHO05D020691 9.6e-25 116.7 94 66.0
Mapoly0081s0047 Marchantia polymorpha HOM05D002169 ORTHO05D006577 1.3e-24 116.3 93 65.6
Thecc.01G003600 Theobroma cacao HOM05D002169 ORTHO05D006577 2.1e-24 115.5 93 64.5
TWI73G1258 Tripterygium wilfordii HOM05D002169 ORTHO05D006577 2.1e-24 115.5 94 66.0
CAN.G1238.30 Capsicum annuum HOM05D002169 ORTHO05D006577 4.8e-24 114.4 103 63.1
PSO675G7681 Papaver somniferum HOM05D002169 ORTHO05D006577 4.8e-24 114.4 97 63.9
Aa31LG8G14800 Aethionema arabicum HOM05D002169 ORTHO05D006577 6.2e-24 114.0 93 66.7
Solyc02g082460.3 Solanum lycopersicum HOM05D002169 ORTHO05D006577 1.1e-23 113.2 94 64.9
Sopen02g027150 Solanum pennellii HOM05D002169 ORTHO05D006577 1.1e-23 113.2 94 64.9
Atru.chr3.27 Acer truncatum HOM05D002169 ORTHO05D006577 1.4e-23 112.8 95 65.3
Lj4A238T76 Lonicera japonica HOM05D002169 ORTHO05D020691 1.4e-23 112.8 94 67.0
AagrBONN_evm.TU.Sc2ySwM_228.1045 Anthoceros agrestis HOM05D002169 ORTHO05D006577 1.8e-23 112.5 93 63.4
PSO541G0991 Papaver somniferum HOM05D002169 ORTHO05D006577 1.8e-23 112.5 97 62.9
SMO228G0179 Selaginella moellendorffii HOM05D002169 ORTHO05D006577 3.1e-23 111.7 92 64.1
Gohir.A07G171800 Gossypium hirsutum HOM05D002169 ORTHO05D006577 6.9e-23 110.5 94 60.6
Gohir.D07G178500 Gossypium hirsutum HOM05D002169 ORTHO05D006577 1.5e-22 109.4 94 59.6
Gorai.001G199700 Gossypium raimondii HOM05D002169 ORTHO05D006577 1.5e-22 109.4 94 59.6
FAN01G1564 Fragaria x ananassa HOM05D002169 ORTHO05D020691 2.6e-22 108.6 74 74.3
FAN28G2624 Fragaria x ananassa HOM05D002169 ORTHO05D006577 4.5e-22 107.8 83 67.5
FAN06G1171 Fragaria x ananassa HOM05D002169 ORTHO05D020691 7.6e-22 107.1 74 73.0
Duzib147G0840 Durio zibethinus HOM05D002169 ORTHO05D006577 1.1e-20 103.2 93 58.1
HPP92_021382 Vanilla planifolia HOM05D002169 ORTHO05D006577 3.2e-20 101.7 93 59.1
CBR_g8384 Chara braunii HOM05D002169 ORTHO05D006577 9.3e-20 100.1 93 59.1
FvH4_7g18421 Fragaria vesca HOM05D002169 ORTHO05D020691 1.2e-19 99.8 80 67.5
Sp3g30870 Schrenkiella parvula HOM05D002169 ORTHO05D006577 2.1e-19 99.0 76 72.4
Zm00001eb092200 Zea mays HOM05D005147 ORTHO05D006132 1.8e-18 95.9 120 47.5
SHI29554 Sapria himalayana HOM05D002169 ORTHO05D006577 2.3e-18 95.5 130 46.9
Cre14.g613850 Chlamydomonas reinhardtii HOM05D002169 ORTHO05D006577 2.5e-17 92.0 89 55.1
MCO02G146 Micromonas commoda HOM05D002169 ORTHO05D006577 9.7e-17 90.1 96 55.2
Zm00001eb248030 Zea mays HOM05D002169 ORTHO05D004800 9.0e-15 83.6 123 44.7
VMungo1215G1369 Vigna mungo HOM05D002169 ORTHO05D006577 1.7e-13 79.3 59 74.6
PRCOL_00000788 Prasinoderma coloniale HOM05D002169 ORTHO05D006577 2.9e-13 78.6 94 46.8
CsaV3_3G005680 Cucumis sativus L. HOM05D002169 ORTHO05D006577 8.8e-10 67.0 55 69.1
BcaNung02375 Brassica carinata HOM05D002169 ORTHO05D006577 3.1e-07 58.5 53 66.0
Cfa024479 Carpinus fangiana HOM05D002169 ORTHO05D006577 9.1e-07 57.0 109 38.5


User provided reference genes

Program Settings