Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s27g0120 Pisum sativum HOM05D006406 ORTHO05D007883 2.1e-188 662.1 324 100.0
Ca_05800_v3 Cicer arietinum L. HOM05D006406 ORTHO05D007883 4.0e-155 551.6 337 80.4
TPR.G33225 Trifolium pratense HOM05D006406 ORTHO05D007883 1.5e-154 549.7 338 81.4
Medtr7g112650 Medicago truncatula HOM05D006406 ORTHO05D007883 5.8e-154 547.7 332 83.1
Glyma.03G235700 Glycine max HOM05D006406 ORTHO05D007883 5.5e-136 488.0 331 74.3
VMungo0540G0116 Vigna mungo HOM05D006406 ORTHO05D007883 1.8e-134 483.0 331 73.1
Phvul.006G089700 Phaseolus vulgaris HOM05D006406 ORTHO05D007883 4.8e-132 474.9 327 73.1
Lalb_Chr18g0045761 Lupinus albus HOM05D006406 ORTHO05D007883 9.1e-131 470.7 325 72.6
arahy.Tifrunner.gnm1.ann1.Q6XDLT Arachis hypogaea HOM05D006406 ORTHO05D007883 1.7e-129 466.5 325 72.6
arahy.Tifrunner.gnm1.ann1.PP7FUY Arachis hypogaea HOM05D006406 ORTHO05D007883 2.2e-129 466.1 325 72.6
Lj1g0022852 Lotus japonicus HOM05D006406 ORTHO05D007883 1.2e-127 460.3 341 69.2
Sabra13G0015900 Salix brachista HOM05D006406 ORTHO05D007883 1.7e-124 449.9 332 67.2
Sabra13G0020100 Salix brachista HOM05D006406 ORTHO05D007883 1.7e-124 449.9 332 66.9
Potri.013G017100 Populus trichocarpa HOM05D006406 ORTHO05D007883 4.8e-124 448.4 336 66.1
Duzib177G0190 Durio zibethinus HOM05D006406 ORTHO05D007883 4.1e-123 445.3 328 66.8
Cfa006628 Carpinus fangiana HOM05D006406 ORTHO05D007883 5.3e-123 444.9 333 67.3
Haze_04140 Corylus avellana HOM05D006406 ORTHO05D007883 1.3e-121 440.3 334 65.9
Hund07096 Selenicereus undatus HOM05D006406 ORTHO05D007883 3.8e-121 438.7 312 68.9
MD04G1200800 Malus domestica HOM05D006406 ORTHO05D007883 8.5e-121 437.6 309 68.6
Thecc.05G312900 Theobroma cacao HOM05D006406 ORTHO05D007883 4.2e-120 435.3 322 65.8
CiPaw.08G161900 Carya illinoinensis HOM05D006406 ORTHO05D007883 9.4e-120 434.1 332 65.4
Manes.08G117600 Manihot esculenta HOM05D006406 ORTHO05D007883 2.7e-119 432.6 334 62.9
COL.COLO4_10518 Corchorus olitorius HOM05D006406 ORTHO05D007883 3.6e-119 432.2 328 64.3
QL03p020986 Quercus lobata HOM05D006406 ORTHO05D007883 1.0e-118 430.6 333 64.6
QL03p021882 Quercus lobata HOM05D006406 ORTHO05D007883 1.8e-118 429.9 315 66.3
RcHm_v2.0_Chr3g0455711 Rosa chinensis HOM05D006406 ORTHO05D007883 1.8e-118 429.9 333 64.3
Ciclev10001711m.g Citrus clementina HOM05D006406 ORTHO05D007883 5.2e-118 428.3 335 63.3
TAR633G0157 Trochodendron aralioides HOM05D006406 ORTHO05D007883 1.5e-117 426.8 346 62.4
Cpa.g.sc48.95 Carica papaya HOM05D006406 ORTHO05D007883 3.3e-117 425.6 309 67.3
PGR083G2713 Punica granatum HOM05D006406 ORTHO05D007883 3.3e-117 425.6 298 68.8
Sc16g0008820 Simmondsia chinensis HOM05D006406 ORTHO05D007883 9.7e-117 424.1 332 62.7
Atru.chr2.29 Acer truncatum HOM05D006406 ORTHO05D007883 1.3e-116 423.7 332 63.6
Oeu043348.1 Olea europaea HOM05D006406 ORTHO05D007883 1.3e-116 423.7 323 64.4
Aa31LG11G9460 Aethionema arabicum HOM05D006406 ORTHO05D007883 4.8e-116 421.8 326 62.9
Gohir.A13G109200 Gossypium hirsutum HOM05D006406 ORTHO05D007883 6.3e-116 421.4 325 63.7
CsaV3_1G038840 Cucumis sativus L. HOM05D006406 ORTHO05D007883 1.1e-115 420.6 332 61.7
Nn4g25830 Nelumbo nucifera HOM05D006406 ORTHO05D007883 1.1e-115 420.6 349 61.3
Hma1.2p1_1212F.1_g267260 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 1.8e-115 419.9 324 64.5
CAN.G1459.10 Capsicum annuum HOM05D006406 ORTHO05D007883 4.1e-115 418.7 297 67.3
Gorai.013G125700 Gossypium raimondii HOM05D006406 ORTHO05D007883 4.1e-115 418.7 325 63.4
GSVIVG01031144001 Vitis vinifera HOM05D006406 ORTHO05D007883 5.3e-115 418.3 332 63.3
Carub.0006s2486 Capsella rubella HOM05D006406 ORTHO05D007883 9.1e-115 417.5 325 62.5
Eucgr.B01914 Eucalyptus grandis HOM05D006406 ORTHO05D007883 1.6e-114 416.8 357 61.3
Nitab4.5_0003658g0090 Nicotiana tabacum HOM05D006406 ORTHO05D007883 2.6e-114 416.0 305 65.2
TWI12G0288 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 3.5e-114 415.6 328 65.2
Thhalv10005730m.g Eutrema salsugineum HOM05D006406 ORTHO05D007883 1.0e-113 414.1 326 62.6
AT5G27710 Arabidopsis thaliana HOM05D006406 ORTHO05D007883 2.2e-113 412.9 328 63.1
Rhsim07G0188300 Rhododendron simsii HOM05D006406 ORTHO05D007883 2.9e-113 412.5 298 65.8
CANSAT54G1062 Cannabis sativa HOM05D006406 ORTHO05D007883 5.0e-113 411.8 332 62.7
ClCG03G017120 Citrullus lanatus HOM05D006406 ORTHO05D007883 1.1e-112 410.6 331 60.7
Gohir.D13G112000 Gossypium hirsutum HOM05D006406 ORTHO05D007883 1.9e-112 409.8 307 64.5
THA.LOC104818716 Tarenaya hassleriana HOM05D006406 ORTHO05D007883 7.2e-112 407.9 333 61.0
FAN14G3705 Fragaria x ananassa HOM05D006406 ORTHO05D007883 1.2e-111 407.1 300 67.3
AL6G39250 Arabidopsis lyrata HOM05D006406 ORTHO05D007883 2.1e-111 406.4 325 60.3
Lj9C146T2 Lonicera japonica HOM05D006406 ORTHO05D007883 4.7e-111 405.2 309 61.8
SalBow7G2778 Salvia bowleyana HOM05D006406 ORTHO05D007883 4.7e-111 405.2 316 62.7
Sp2g20880 Schrenkiella parvula HOM05D006406 ORTHO05D007883 4.7e-111 405.2 323 61.6
Nitab4.5_0003844g0020 Nicotiana tabacum HOM05D006406 ORTHO05D007883 6.1e-111 404.8 293 66.6
Hund07097 Selenicereus undatus HOM05D006406 ORTHO05D007883 1.0e-110 404.1 289 65.7
Sopen01g043220 Solanum pennellii HOM05D006406 ORTHO05D007883 1.4e-110 403.7 315 63.8
Prupe.6G320900 Prunus persica HOM05D006406 ORTHO05D007883 2.3e-110 402.9 311 64.6
Solyc01g099700.3 Solanum lycopersicum HOM05D006406 ORTHO05D007883 6.8e-110 401.4 315 63.5
SGA_v2.0_scaffold172G38986 Striga asiatica HOM05D006406 ORTHO05D007883 1.5e-109 400.2 325 61.8
Sed0006495 Sechium edule HOM05D006406 ORTHO05D007883 2.0e-109 399.8 322 62.4
vmacro04816 Vaccinium macrocarpon HOM05D006406 ORTHO05D007883 3.4e-109 399.1 346 60.1
TWI36G0652 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 5.7e-109 398.3 315 62.9
Aqoxy5G00730 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 7.5e-109 397.9 319 62.4
MBI18_g46420_MAGBIO Magnolia biondii HOM05D006406 ORTHO05D007883 9.7e-109 397.5 318 61.6
FAN05G5419 Fragaria x ananassa HOM05D006406 ORTHO05D007883 1.3e-108 397.1 290 66.2
Peaxi162Scf00037g01125 Petunia axillaris HOM05D006406 ORTHO05D007883 4.8e-108 395.2 324 61.1
PGSC0003DMG400007542 Solanum tuberosum HOM05D006406 ORTHO05D007883 4.8e-108 395.2 300 63.7
EL10Ac4g09916 Beta vulgaris HOM05D006406 ORTHO05D007883 1.4e-107 393.7 291 64.3
A09p05410 Brassica napus HOM05D006406 ORTHO05D007883 2.0e-106 389.8 326 60.1
BraA09t36179Z Brassica rapa HOM05D006406 ORTHO05D007883 2.0e-106 389.8 326 60.1
Migut.N01744 Erythranthe guttata HOM05D006406 ORTHO05D007883 2.7e-106 389.4 308 62.3
Actinidia35561 Actinidia chinensis HOM05D006406 ORTHO05D007883 2.9e-105 386.0 345 57.7
unitig_52.g17112 Utricularia gibba HOM05D006406 ORTHO05D007883 2.9e-105 386.0 345 58.8
CARHR186230 Cardamine hirsuta HOM05D006406 ORTHO05D007883 6.5e-105 384.8 300 63.0
BcaB04g19684 Brassica carinata HOM05D006406 ORTHO05D007883 8.5e-105 384.4 330 59.7
BcaC04g23642 Brassica carinata HOM05D006406 ORTHO05D007883 8.5e-105 384.4 327 60.2
C09p05890 Brassica napus HOM05D006406 ORTHO05D007883 1.2e-103 380.6 328 60.4
BolC9t53515H Brassica oleracea HOM05D006406 ORTHO05D007883 1.2e-103 380.6 328 60.4
Glyma.19G233500 Glycine max HOM05D006406 ORTHO05D007883 4.7e-103 378.6 277 70.0
AUR62000764 Chenopodium quinoa HOM05D006406 ORTHO05D007883 1.2e-101 374.0 313 59.1
CSS0003718 Camellia sinensis var. sinensis HOM05D006406 ORTHO05D007883 1.5e-101 373.6 333 58.3
PSO210G1688 Papaver somniferum HOM05D006406 ORTHO05D007883 7.5e-101 371.3 319 59.6
PSO210G1514 Papaver somniferum HOM05D006406 ORTHO05D007883 1.1e-99 367.5 323 58.2
HanXRQChr11g0339311 Helianthus annuus HOM05D006406 ORTHO05D007883 4.1e-99 365.5 297 62.3
ECA236G2290 Erigeron canadensis HOM05D006406 ORTHO05D007883 5.9e-98 361.7 285 62.8
CDE11G0411 Ceratophyllum demersum HOM05D001335 ORTHO05D001184 1.3e-97 360.5 303 56.8
Cc02_g34120 Coffea canephora HOM05D006406 ORTHO05D007883 2.5e-96 356.3 215 75.3
Ah.06g189770 Amaranthus hybridus HOM05D006406 ORTHO05D007883 3.3e-96 355.9 264 64.0
Lsat_1_v5_gn_9_88181 Lactuca sativa HOM05D006406 ORTHO05D007883 1.2e-95 354.0 325 56.6
Os07g0673000 Oryza sativa ssp. japonica HOM05D006406 ORTHO05D007883 4.7e-95 352.1 263 62.0
ATR0796G153 Amborella trichopoda HOM05D006406 ORTHO05D007883 1.4e-94 350.5 232 68.5
AUR62005205 Chenopodium quinoa HOM05D006406 ORTHO05D007883 1.5e-93 347.1 318 55.7
Dinv30810 Davidia involucrata HOM05D006406 ORTHO05D007883 1.2e-90 337.4 252 64.3
SEGI_05797 Sequoiadendron giganteum HOM05D006406 ORTHO05D007883 1.4e-86 323.9 295 51.2
DCAR_029393 Daucus carota HOM05D006406 ORTHO05D007883 8.3e-84 314.7 341 50.1
FvH4_6g06560 Fragaria vesca HOM05D006406 ORTHO05D007883 3.1e-78 296.2 237 62.9
MELO3C015308.2 Cucumis melo HOM05D006406 ORTHO05D007883 5.4e-75 285.4 330 47.6
SMO172G0153 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 3.2e-67 259.6 278 46.8
SMO172G0232 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 1.9e-64 250.4 279 45.5
Pp3c6_26830 Physcomitrium patens HOM05D006406 ORTHO05D007883 4.7e-63 245.7 226 51.3
Mapoly0054s0047 Marchantia polymorpha HOM05D006406 ORTHO05D007883 8.1e-63 245.0 308 42.5
Zm00001eb111280 Zea mays HOM05D006406 ORTHO05D007883 4.4e-61 239.2 208 54.8
Hma1.2p1_1212F.1_g267270 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 3.8e-60 236.1 210 59.0
Oeu043349.1 Olea europaea HOM05D006406 ORTHO05D007883 1.2e-58 231.1 209 56.9
CBR_g19246 Chara braunii HOM05D006406 ORTHO05D007883 5.1e-57 225.7 231 45.9
HPP92_011843 Vanilla planifolia HOM05D006406 ORTHO05D007883 3.3e-56 223.0 296 43.2
PGSC0003DMG400024710 Solanum tuberosum HOM05D006406 ORTHO05D007883 7.3e-56 221.9 206 56.3
arahy.Tifrunner.gnm1.ann1.AST3BR Arachis hypogaea HOM05D006406 ORTHO05D007883 1.9e-51 207.2 159 62.9
SMO198G0100 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 2.1e-47 193.7 291 38.5
PSO421G0497 Papaver somniferum HOM05D006406 ORTHO05D007883 3.8e-44 183.0 334 35.9
MSTRG.16393 Avicennia marina HOM05D006406 ORTHO05D007883 1.6e-31 141.0 172 51.2
AagrBONN_evm.TU.Sc2ySwM_362.2555 Anthoceros agrestis HOM05D006406 ORTHO05D007883 4.8e-31 139.4 106 57.5
FAN02G3513 Fragaria x ananassa HOM05D006406 ORTHO05D007883 1.2e-29 134.8 150 51.3
BcaB07g32734 Brassica carinata HOM05D006406 ORTHO05D007883 2.5e-16 90.5 131 44.3
Lsat_1_v5_gn_5_186620 Lactuca sativa HOM05D006406 ORTHO05D007883 3.8e-12 76.6 154 35.7
AL3G41450 Arabidopsis lyrata HOM05D000059 ORTHO05D000128 4.2e-11 73.2 40 77.5
Cre09.g392700 Chlamydomonas reinhardtii HOM05D006406 ORTHO05D007883 5.1e-09 66.2 103 39.8
Aqoxy601s001 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 5.3e-06 56.2 33 72.7


User provided reference genes

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