Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s2633g0080 Pisum sativum HOM05D000959 ORTHO05D327666 3.5e-33 144.4 76 100.0
Medtr2g097520 Medicago truncatula HOM05D000959 ORTHO05D000775 2.7e-09 65.1 36 88.9
TPR.G40397 Trifolium pratense HOM05D000959 ORTHO05D000775 7.8e-09 63.5 36 86.1
Glyma.13G337900 Glycine max HOM05D000959 ORTHO05D000775 1.7e-08 62.4 31 90.3
Glyma.15G036600 Glycine max HOM05D000959 ORTHO05D000775 1.7e-08 62.4 35 80.0
Ca_01315_v3 Cicer arietinum L. HOM05D000959 ORTHO05D000775 6.6e-08 60.5 76 51.3
MD03G1088500 Malus domestica HOM05D000959 ORTHO05D000775 3.3e-07 58.2 44 61.4
Sed0002422 Sechium edule HOM05D000959 ORTHO05D000775 3.3e-07 58.2 44 63.6
Lj3g0025443 Lotus japonicus HOM05D000959 ORTHO05D000775 4.3e-07 57.8 31 83.9
Phvul.L007043 Phaseolus vulgaris HOM05D000959 ORTHO05D000775 4.3e-07 57.8 31 83.9
Hma1.2p1_0757F.1_g213260 Hydrangea macrophylla HOM05D000959 ORTHO05D000775 5.6e-07 57.4 43 62.8
Hma1.2p1_1861F.1_g305685 Hydrangea macrophylla HOM05D000959 ORTHO05D000775 5.6e-07 57.4 43 62.8
MD11G1097500 Malus domestica HOM05D000959 ORTHO05D000775 5.6e-07 57.4 44 63.6
VMungo1080G0169 Vigna mungo HOM05D000959 ORTHO05D000775 5.6e-07 57.4 34 76.5
ClCG03G001370 Citrullus lanatus HOM05D000959 ORTHO05D000775 7.3e-07 57.0 31 80.6
TWI77G0337 Tripterygium wilfordii HOM05D000959 ORTHO05D000775 7.3e-07 57.0 46 60.9
vmacro14547 Vaccinium macrocarpon HOM05D000959 ORTHO05D000775 7.3e-07 57.0 44 61.4
Eucgr.B02326 Eucalyptus grandis HOM05D000959 ORTHO05D000775 9.6e-07 56.6 46 54.3
Gohir.D08G011600 Gossypium hirsutum HOM05D000959 ORTHO05D000775 9.6e-07 56.6 30 83.3
Gorai.004G005300 Gossypium raimondii HOM05D000959 ORTHO05D000775 9.6e-07 56.6 30 83.3
arahy.Tifrunner.gnm1.ann1.PP2Z6E Arachis hypogaea HOM05D000959 ORTHO05D000775 1.2e-06 56.2 31 80.6
Dinv42977 Davidia involucrata HOM05D000959 ORTHO05D000775 1.2e-06 56.2 29 86.2
Phvul.011G062900 Phaseolus vulgaris HOM05D000959 ORTHO05D000775 1.2e-06 56.2 30 83.3
AUR62001759 Chenopodium quinoa HOM05D000959 ORTHO05D000775 1.6e-06 55.8 33 75.8
AUR62009545 Chenopodium quinoa HOM05D000959 ORTHO05D000775 1.6e-06 55.8 33 75.8
Hund04938 Selenicereus undatus HOM05D000959 ORTHO05D000775 1.6e-06 55.8 33 78.8
TPR.G23609 Trifolium pratense HOM05D000959 ORTHO05D000775 1.6e-06 55.8 46 58.7
TWI74G0947 Tripterygium wilfordii HOM05D000959 ORTHO05D000775 1.6e-06 55.8 46 58.7
Actinidia23926 Actinidia chinensis HOM05D000959 ORTHO05D000775 2.1e-06 55.5 61 47.5
Actinidia34420 Actinidia chinensis HOM05D000959 ORTHO05D000775 2.8e-06 55.1 43 58.1
Ah.15g097750 Amaranthus hybridus HOM05D000959 ORTHO05D000775 2.8e-06 55.1 32 75.0
EL10Ac7g16045 Beta vulgaris HOM05D000959 ORTHO05D000775 2.8e-06 55.1 32 78.1
Duzib168G1523 Durio zibethinus HOM05D000959 ORTHO05D000775 2.8e-06 55.1 29 82.8
Gohir.A08G000700 Gossypium hirsutum HOM05D000959 ORTHO05D000775 2.8e-06 55.1 30 80.0
Lj3g0021831 Lotus japonicus HOM05D000959 ORTHO05D000775 2.8e-06 55.1 46 58.7
MD11G1097600 Malus domestica HOM05D000959 ORTHO05D000775 2.8e-06 55.1 44 63.6
THA.LOC104806559 Tarenaya hassleriana HOM05D000959 ORTHO05D000775 2.8e-06 55.1 29 82.8
Thecc.09G318600 Theobroma cacao HOM05D000959 ORTHO05D000775 2.8e-06 55.1 29 82.8
Atru.chr3.3975 Acer truncatum HOM05D000959 ORTHO05D000775 3.6e-06 54.7 33 72.7
Medtr4g064380 Medicago truncatula HOM05D000959 ORTHO05D000775 3.6e-06 54.7 46 58.7
Psat7g215400 Pisum sativum HOM05D000959 ORTHO05D000775 3.6e-06 54.7 46 58.7
Prupe.6G072700 Prunus persica HOM05D000959 ORTHO05D000775 3.6e-06 54.7 44 61.4
Sed0000361 Sechium edule HOM05D000959 ORTHO05D000775 3.6e-06 54.7 29 82.8
CSS0017840 Camellia sinensis var. sinensis HOM05D000959 ORTHO05D000775 4.7e-06 54.3 43 60.5
CSS0019260 Camellia sinensis var. sinensis HOM05D000959 ORTHO05D000775 4.7e-06 54.3 43 60.5
COL.COLO4_18547 Corchorus olitorius HOM05D000959 ORTHO05D000775 4.7e-06 54.3 29 79.3
COL.COLO4_30419 Corchorus olitorius HOM05D000959 ORTHO05D000775 4.7e-06 54.3 29 79.3
Manes.01G171300 Manihot esculenta HOM05D000959 ORTHO05D000775 4.7e-06 54.3 35 71.4
arahy.Tifrunner.gnm1.ann1.K25JBG Arachis hypogaea HOM05D000959 ORTHO05D000775 6.2e-06 53.9 31 77.4
BcaB01g04574 Brassica carinata HOM05D000959 ORTHO05D000775 6.2e-06 53.9 31 77.4
BcaC01g06519 Brassica carinata HOM05D000959 ORTHO05D000775 6.2e-06 53.9 31 77.4
A03p11720 Brassica napus HOM05D000959 ORTHO05D000775 6.2e-06 53.9 31 77.4
C03p13680 Brassica napus HOM05D000959 ORTHO05D000775 6.2e-06 53.9 31 77.4
BolC3t13817H Brassica oleracea HOM05D000959 ORTHO05D000775 6.2e-06 53.9 31 77.4
BraA03t10483Z Brassica rapa HOM05D000959 ORTHO05D000775 6.2e-06 53.9 31 77.4
Carub.0008s2017 Capsella rubella HOM05D000959 ORTHO05D000775 6.2e-06 53.9 32 75.0
Cpa.g.sc81.118 Carica papaya HOM05D000959 ORTHO05D000775 6.2e-06 53.9 28 85.7
Glyma.03G065900 Glycine max HOM05D000959 ORTHO05D000775 6.2e-06 53.9 46 56.5
Glyma.03G073754 Glycine max HOM05D000959 ORTHO05D000775 6.2e-06 53.9 46 56.5
Glyma.03G073758 Glycine max HOM05D000959 ORTHO05D000775 6.2e-06 53.9 46 56.5
Glyma.05G037766 Glycine max HOM05D000959 ORTHO05D000775 6.2e-06 53.9 46 56.5
TAR369G0590 Trochodendron aralioides HOM05D000959 ORTHO05D000775 6.2e-06 53.9 46 58.7
TAR623G0734 Trochodendron aralioides HOM05D000959 ORTHO05D000775 6.2e-06 53.9 46 54.3
TAR636G2660 Trochodendron aralioides HOM05D000959 ORTHO05D000775 6.2e-06 53.9 31 74.2
VMungo1127G1475 Vigna mungo HOM05D000959 ORTHO05D000775 6.2e-06 53.9 28 85.7
A02p07100 Brassica napus HOM05D000959 ORTHO05D000775 8.1e-06 53.5 35 65.7
BraA02t05791Z Brassica rapa HOM05D000959 ORTHO05D000775 8.1e-06 53.5 35 65.7
MELO3C020616.2 Cucumis melo HOM05D000959 ORTHO05D000775 8.1e-06 53.5 29 79.3
Glyma.11G137800 Glycine max HOM05D000959 ORTHO05D000775 8.1e-06 53.5 30 80.0
Gohir.A03G044100 Gossypium hirsutum HOM05D000959 ORTHO05D000775 8.1e-06 53.5 29 79.3
Gohir.D03G123400 Gossypium hirsutum HOM05D000959 ORTHO05D000775 8.1e-06 53.5 29 79.3
Gorai.003G130000 Gossypium raimondii HOM05D000959 ORTHO05D000775 8.1e-06 53.5 29 79.3
Sed0024843 Sechium edule HOM05D000959 ORTHO05D000775 8.1e-06 53.5 44 54.5
TAR633G1195 Trochodendron aralioides HOM05D000959 ORTHO05D000775 8.1e-06 53.5 44 56.8
VMungo0720G1514 Vigna mungo HOM05D000959 ORTHO05D000775 8.1e-06 53.5 44 52.3


User provided reference genes

Program Settings