Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s2555g0200 Pisum sativum HOM05D005661 ORTHO05D007997 2.7e-169 598.6 307 100.0
TPR.G5996 Trifolium pratense HOM05D005661 ORTHO05D007997 4.4e-119 431.8 267 85.4
Lj4g0018255 Lotus japonicus HOM05D005661 ORTHO05D007997 1.2e-113 413.7 318 72.3
Nitab4.5_0006159g0030 Nicotiana tabacum HOM05D005661 ORTHO05D007997 3.4e-111 405.6 290 73.8
CSS0021874 Camellia sinensis var. sinensis HOM05D005661 ORTHO05D007997 4.4e-111 405.2 269 76.2
Manes.14G146200 Manihot esculenta HOM05D005661 ORTHO05D007997 4.4e-111 405.2 256 80.1
Glyma.17G002400 Glycine max HOM05D005661 ORTHO05D007997 5.8e-111 404.8 236 84.7
Nitab4.5_0001085g0130 Nicotiana tabacum HOM05D005661 ORTHO05D007997 9.9e-111 404.1 267 77.2
Aqoxy1G02010 Aquilegia oxysepala HOM05D005661 ORTHO05D007997 3.7e-110 402.1 270 76.7
QL02p103676 Quercus lobata HOM05D005661 ORTHO05D007997 4.9e-110 401.7 257 78.6
CAN.G1379.8 Capsicum annuum HOM05D005661 ORTHO05D007997 6.4e-110 401.4 231 85.7
GSVIVG01023131001 Vitis vinifera HOM05D005661 ORTHO05D007997 6.4e-110 401.4 257 79.8
Oeu000159.1 Olea europaea HOM05D005661 ORTHO05D007997 8.4e-110 401.0 246 83.3
MD15G1444200 Malus domestica HOM05D005661 ORTHO05D007997 1.4e-109 400.2 275 74.9
Manes.14G166900 Manihot esculenta HOM05D005661 ORTHO05D007997 1.4e-109 400.2 254 80.7
TAR628G0241 Trochodendron aralioides HOM05D005661 ORTHO05D007997 3.2e-109 399.1 268 77.2
VMungo1215G1111 Vigna mungo HOM05D005661 ORTHO05D007997 5.4e-109 398.3 251 81.7
Actinidia11729 Actinidia chinensis HOM05D005661 ORTHO05D007997 2.7e-108 396.0 283 73.1
Nn5g27134 Nelumbo nucifera HOM05D005661 ORTHO05D007997 6.0e-108 394.8 237 82.7
Solyc01g102820.4 Solanum lycopersicum HOM05D005661 ORTHO05D007997 6.0e-108 394.8 260 76.9
Sopen01g045220 Solanum pennellii HOM05D005661 ORTHO05D007997 6.0e-108 394.8 260 76.9
PGSC0003DMG401018218 Solanum tuberosum HOM05D005661 ORTHO05D007997 6.0e-108 394.8 248 81.0
HanXRQChr05g0153021 Helianthus annuus HOM05D005661 ORTHO05D007997 1.7e-107 393.3 265 77.7
Dinv38445 Davidia involucrata HOM05D005661 ORTHO05D007997 2.3e-107 392.9 257 78.6
Eucgr.I02806 Eucalyptus grandis HOM05D005661 ORTHO05D007997 2.3e-107 392.9 268 73.9
Prupe.1G586600 Prunus persica HOM05D005661 ORTHO05D007997 3.0e-107 392.5 258 77.5
FvH4_5g27480 Fragaria vesca HOM05D005661 ORTHO05D007997 5.1e-107 391.7 265 76.6
FAN08G1685 Fragaria x ananassa HOM05D005661 ORTHO05D007997 6.6e-107 391.3 259 76.4
FAN04G2212 Fragaria x ananassa HOM05D005661 ORTHO05D007997 8.6e-107 391.0 270 75.6
MSTRG.16459 Avicennia marina HOM05D005661 ORTHO05D007997 1.1e-106 390.6 287 71.8
Thecc.06G064100 Theobroma cacao HOM05D005661 ORTHO05D007997 1.5e-106 390.2 259 78.4
MELO3C016431.2 Cucumis melo HOM05D005661 ORTHO05D007997 2.5e-106 389.4 231 83.1
Lsat_1_v5_gn_9_124861 Lactuca sativa HOM05D005661 ORTHO05D007997 2.5e-106 389.4 262 77.9
RcHm_v2.0_Chr7g0218881 Rosa chinensis HOM05D005661 ORTHO05D007997 4.3e-106 388.7 259 75.7
Medtr4g134540 Medicago truncatula HOM05D005661 ORTHO05D007997 5.6e-106 388.3 286 72.4
Peaxi162Scf00194g01045 Petunia axillaris HOM05D005661 ORTHO05D007997 5.6e-106 388.3 230 83.0
Potri.004G230200 Populus trichocarpa HOM05D005661 ORTHO05D007997 5.6e-106 388.3 231 83.1
CsaV3_3G006740 Cucumis sativus L. HOM05D005661 ORTHO05D007997 7.3e-106 387.9 301 68.4
Migut.B00706 Erythranthe guttata HOM05D005661 ORTHO05D007997 7.3e-106 387.9 246 80.1
Ciclev10002035m.g Citrus clementina HOM05D005661 ORTHO05D007997 9.6e-106 387.5 259 76.4
Gorai.010G134700 Gossypium raimondii HOM05D005661 ORTHO05D007997 1.6e-105 386.7 251 78.5
ECA246G0516 Erigeron canadensis HOM05D005661 ORTHO05D007997 2.8e-105 386.0 230 83.9
THA.LOC104801778 Tarenaya hassleriana HOM05D005661 ORTHO05D007997 2.8e-105 386.0 297 68.7
Phvul.003G090900 Phaseolus vulgaris HOM05D005661 ORTHO05D007997 3.6e-105 385.6 293 71.7
Cfa004424 Carpinus fangiana HOM05D005661 ORTHO05D007997 8.1e-105 384.4 248 77.8
MD08G1249400 Malus domestica HOM05D005661 ORTHO05D007997 1.8e-104 383.3 238 79.8
Cc02_g23630 Coffea canephora HOM05D005661 ORTHO05D007997 3.1e-104 382.5 254 77.6
PGR142G1782 Punica granatum HOM05D005661 ORTHO05D007997 5.2e-104 381.7 263 73.8
DCAR_031998 Daucus carota HOM05D005661 ORTHO05D007997 6.8e-104 381.3 252 75.8
Gohir.A06G112500 Gossypium hirsutum HOM05D005661 ORTHO05D007997 6.8e-104 381.3 251 78.1
DCAR_001732 Daucus carota HOM05D005661 ORTHO05D007997 8.9e-104 380.9 251 78.1
Gohir.D06G117100 Gossypium hirsutum HOM05D005661 ORTHO05D007997 8.9e-104 380.9 231 82.3
Rhsim11G0115300 Rhododendron simsii HOM05D005661 ORTHO05D007997 1.2e-103 380.6 294 70.1
FAN13G1518 Fragaria x ananassa HOM05D005661 ORTHO05D007997 1.5e-103 380.2 230 81.7
TWI23G0175 Tripterygium wilfordii HOM05D005661 ORTHO05D007997 2.0e-103 379.8 230 82.2
ATR1089G013 Amborella trichopoda HOM05D005661 ORTHO05D007997 5.8e-103 378.3 237 80.6
MSTRG.20341 Avicennia marina HOM05D005661 ORTHO05D007997 5.8e-103 378.3 290 69.7
HanXRQChr09g0249911 Helianthus annuus HOM05D005661 ORTHO05D007997 1.3e-102 377.1 223 83.4
unitig_21.g20570 Utricularia gibba HOM05D005661 ORTHO05D007997 1.3e-102 377.1 249 79.1
Sc09g0007750 Simmondsia chinensis HOM05D005661 ORTHO05D007997 1.7e-102 376.7 246 75.2
BcaB07g30331 Brassica carinata HOM05D005661 ORTHO05D007997 2.9e-102 375.9 249 75.9
PSO210G4998 Papaver somniferum HOM05D005661 ORTHO05D007997 3.8e-102 375.6 276 71.0
CARHR145060 Cardamine hirsuta HOM05D005661 ORTHO05D007997 8.4e-102 374.4 264 72.7
CANSAT01G0358 Cannabis sativa HOM05D005661 ORTHO05D007997 1.1e-101 374.0 248 77.4
Carub.0005s0153 Capsella rubella HOM05D005661 ORTHO05D007997 1.9e-101 373.2 249 75.1
A02p32920 Brassica napus HOM05D005661 ORTHO05D007997 4.2e-101 372.1 297 66.0
BraA02t08315Z Brassica rapa HOM05D005661 ORTHO05D007997 4.2e-101 372.1 249 75.1
Aa31LG2G7610 Aethionema arabicum HOM05D005661 ORTHO05D007997 7.1e-101 371.3 249 74.7
BcaC03g17145 Brassica carinata HOM05D005661 ORTHO05D007997 9.3e-101 370.9 249 74.7
C02p50650 Brassica napus HOM05D005661 ORTHO05D007997 1.2e-100 370.5 249 74.3
Thhalv10004647m.g Eutrema salsugineum HOM05D005661 ORTHO05D007997 1.2e-100 370.5 265 72.5
BolC2t11148H Brassica oleracea HOM05D005661 ORTHO05D007997 1.6e-100 370.2 298 65.4
AL5G11770 Arabidopsis lyrata HOM05D005661 ORTHO05D007997 3.5e-100 369.0 249 73.9
Sp2g13750 Schrenkiella parvula HOM05D005661 ORTHO05D007997 4.6e-100 368.6 285 68.4
AT2G02500 Arabidopsis thaliana HOM05D005661 ORTHO05D007997 6.0e-100 368.2 249 74.7
MBI06_g17067_MAGBIO Magnolia biondii HOM05D005661 ORTHO05D007997 6.0e-100 368.2 261 73.2
Lalb_Chr07g0176831 Lupinus albus HOM05D005661 ORTHO05D007997 1.7e-99 366.7 259 74.9
HPP92_003721 Vanilla planifolia HOM05D005661 ORTHO05D007997 1.3e-97 360.5 245 73.9
HPP92_003715 Vanilla planifolia HOM05D005661 ORTHO05D007997 2.1e-97 359.8 242 74.4
Zm00001eb365960 Zea mays HOM05D005661 ORTHO05D007997 4.8e-97 358.6 283 67.8
arahy.Tifrunner.gnm1.ann1.PPAS6H Arachis hypogaea HOM05D005661 ORTHO05D007997 8.1e-97 357.8 275 67.3
AUR62042241 Chenopodium quinoa HOM05D005661 ORTHO05D007997 2.4e-96 356.3 304 63.2
SEGI_39309 Sequoiadendron giganteum HOM05D005661 ORTHO05D007997 2.4e-96 356.3 249 73.1
Sabra01G0175500 Salix brachista HOM05D005661 ORTHO05D007997 7.6e-95 351.3 300 64.0
COL.COLO4_31208 Corchorus olitorius HOM05D005661 ORTHO05D007997 1.3e-94 350.5 209 83.3
arahy.Tifrunner.gnm1.ann1.FQN863 Arachis hypogaea HOM05D005661 ORTHO05D007997 2.2e-94 349.7 272 68.0
Zm00001eb145390 Zea mays HOM05D005661 ORTHO05D007997 6.4e-94 348.2 240 73.8
Dinv29650 Davidia involucrata HOM05D005661 ORTHO05D007997 1.1e-93 347.4 212 81.6
Haze_09964 Corylus avellana HOM05D005661 ORTHO05D007997 2.1e-92 343.2 253 71.5
Mapoly0006s0146 Marchantia polymorpha HOM05D005661 ORTHO05D007997 2.1e-92 343.2 243 72.0
Ca_13523_v3 Cicer arietinum L. HOM05D005661 ORTHO05D007997 3.9e-91 339.0 193 87.6
EL10Ac6g13962 Beta vulgaris HOM05D005661 ORTHO05D007997 1.1e-90 337.4 230 73.0
AUR62032486 Chenopodium quinoa HOM05D005661 ORTHO05D007997 1.5e-90 337.0 307 61.6
Pp3c15_1010 Physcomitrium patens HOM05D005661 ORTHO05D007997 2.8e-89 332.8 231 71.4
ClCG10G007530 Citrullus lanatus HOM05D005661 ORTHO05D007997 4.8e-89 332.0 321 58.3
Pp3c9_590 Physcomitrium patens HOM05D005661 ORTHO05D007997 6.2e-89 331.6 238 70.6
SMO367G1090 Selaginella moellendorffii HOM05D005661 ORTHO05D007997 2.0e-87 326.6 226 70.4
SGA_v2.0_scaffold131G34439 Striga asiatica HOM05D005661 ORTHO05D007997 1.1e-85 320.9 259 69.1
vmacro01624 Vaccinium macrocarpon HOM05D005661 ORTHO05D007997 9.3e-85 317.8 258 69.8
CDE02G0980 Ceratophyllum demersum HOM05D005661 ORTHO05D007997 1.2e-84 317.4 294 62.2
Ah.02g128470 Amaranthus hybridus HOM05D005661 ORTHO05D007997 1.3e-83 313.9 300 59.0
Sed0000786 Sechium edule HOM05D005661 ORTHO05D007997 2.1e-81 306.6 207 75.4
Cpa.g.sc173.2 Carica papaya HOM05D005661 ORTHO05D007997 3.7e-81 305.8 196 78.6
CiPaw.06G177000 Carya illinoinensis HOM05D005661 ORTHO05D007997 5.8e-79 298.5 186 78.5
CDE04G2298 Ceratophyllum demersum HOM05D005661 ORTHO05D007997 2.9e-78 296.2 252 64.7
MCO15G500 Micromonas commoda HOM05D005661 ORTHO05D007997 2.5e-74 283.1 273 56.4
Os01g0887100 Oryza sativa ssp. japonica HOM05D005661 ORTHO05D007997 5.3e-72 275.4 172 78.5
Lj5A292T55 Lonicera japonica HOM05D005661 ORTHO05D007997 3.4e-71 272.7 212 68.9
Cre16.g679669 Chlamydomonas reinhardtii HOM05D005661 ORTHO05D007997 5.0e-70 268.9 224 61.2
Atru.chr6.139 Acer truncatum HOM05D005661 ORTHO05D007997 2.2e-62 243.4 177 72.3
Actinidia00142 Actinidia chinensis HOM05D005661 ORTHO05D007997 3.8e-62 242.7 178 68.0
CBR_g214 Chara braunii HOM05D005661 ORTHO05D007997 2.0e-55 220.3 183 59.6
Lj5A292T53 Lonicera japonica HOM05D005661 ORTHO05D007997 1.4e-53 214.2 175 66.9
arahy.Tifrunner.gnm1.ann1.H0NKK3 Arachis hypogaea HOM05D005661 ORTHO05D007997 3.0e-43 179.9 178 57.3
Hund15335 Selenicereus undatus HOM05D005661 ORTHO05D007997 1.1e-40 171.4 162 57.4
AagrBONN_evm.TU.Sc2ySwM_362.430 Anthoceros agrestis HOM05D005661 ORTHO05D007997 7.0e-40 168.7 154 59.1
Ca_21047_v3 Cicer arietinum L. HOM05D005661 ORTHO05D147477 5.0e-38 162.5 287 42.5
AUR62030219 Chenopodium quinoa HOM05D005661 ORTHO05D007997 5.5e-37 159.1 168 54.2
HanXRQChr03g0069601 Helianthus annuus HOM05D005661 ORTHO05D007997 5.5e-37 159.1 104 73.1
VMungo1364G0001 Vigna mungo HOM05D005661 ORTHO05D005421 1.8e-27 127.5 150 47.3
FvH4_5g27493 Fragaria vesca HOM05D005661 ORTHO05D007997 4.0e-27 126.3 266 39.8
FAN08G3692 Fragaria x ananassa HOM05D005661 ORTHO05D208506 2.0e-23 114.0 182 44.0
SMO367G1054 Selaginella moellendorffii HOM05D005661 ORTHO05D007997 5.9e-23 112.5 144 48.6
FAN08G1519 Fragaria x ananassa HOM05D005661 ORTHO05D210776 1.0e-22 111.7 144 50.0
AagrBONN_evm.TU.Sc2ySwM_362.419 Anthoceros agrestis HOM05D005661 ORTHO05D007997 4.7e-20 102.8 66 72.7
Haze_27119 Corylus avellana HOM05D005196 ORTHO05D006107 6.8e-19 99.0 236 30.1
Ca_29126_v3 Cicer arietinum L. HOM05D005661 ORTHO05D148461 4.9e-17 92.8 218 30.3
CAN.G242.16 Capsicum annuum HOM05D005661 ORTHO05D007997 1.6e-15 87.8 56 67.9
Lj5A292T54 Lonicera japonica HOM05D005661 ORTHO05D007997 4.6e-15 86.3 48 79.2
FvH4_5g27491 Fragaria vesca HOM05D005661 ORTHO05D046262 6.6e-14 82.4 108 48.1
HanXRQChr14g0444001 Helianthus annuus HOM05D005661 ORTHO05D007997 8.6e-14 82.0 63 58.7
FAN08G0833 Fragaria x ananassa HOM05D005661 ORTHO05D203111 1.3e-09 68.2 61 65.6
FAN13G2879 Fragaria x ananassa HOM05D005661 ORTHO05D046262 7.0e-08 62.4 195 32.8
Medtr4g129075 Medicago truncatula HOM05D005661 ORTHO05D266434 1.7e-06 57.8 32 81.2


User provided reference genes

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