Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s1901g0040 Pisum sativum HOM05D041111 ORTHO05D000230 4.4e-104 381.7 255 100.0
Psat5g241680 Pisum sativum HOM05D041111 ORTHO05D000230 1.4e-89 333.6 250 92.8
Psat5g241640 Pisum sativum HOM05D041111 ORTHO05D000230 5.2e-89 331.6 250 92.4
Psat5g237360 Pisum sativum HOM05D000187 ORTHO05D000230 1.1e-11 74.7 57 64.9
Ca_04027_v3 Cicer arietinum L. HOM05D000187 ORTHO05D000230 1.3e-10 71.2 181 32.0
TPR.G13937 Trifolium pratense HOM05D000187 ORTHO05D000230 2.1e-10 70.5 57 59.6
TPR.G29648 Trifolium pratense HOM05D000187 ORTHO05D000230 2.1e-10 70.5 233 30.0
Psat5g241040 Pisum sativum HOM05D000187 ORTHO05D000230 4.8e-10 69.3 181 31.5
Lalb_Chr01g0016741 Lupinus albus HOM05D000187 ORTHO05D000230 1.4e-09 67.8 57 59.6
Manes.03G104000 Manihot esculenta HOM05D000187 ORTHO05D000230 1.4e-09 67.8 57 63.2
Medtr2g076290 Medicago truncatula HOM05D000187 ORTHO05D000230 1.4e-09 67.8 320 36.2
VMungo1080G0860 Vigna mungo HOM05D000187 ORTHO05D000230 3.1e-09 66.6 57 63.2
Nn1g04281 Nelumbo nucifera HOM05D000187 ORTHO05D000230 9.0e-09 65.1 58 55.2
CiPaw.11G166100 Carya illinoinensis HOM05D000187 ORTHO05D000230 1.2e-08 64.7 57 57.9
Haze_09375 Corylus avellana HOM05D000187 ORTHO05D000230 1.5e-08 64.3 57 61.4
Phvul.005G068800 Phaseolus vulgaris HOM05D000187 ORTHO05D000230 1.5e-08 64.3 57 59.6
Hund22763 Selenicereus undatus HOM05D000187 ORTHO05D000230 1.5e-08 64.3 57 59.6
Ciclev10007976m.g Citrus clementina HOM05D000187 ORTHO05D000230 2.6e-08 63.5 57 57.9
Lalb_Chr01g0006661 Lupinus albus HOM05D000187 ORTHO05D000230 2.6e-08 63.5 56 60.7
Lalb_Chr20g0109431 Lupinus albus HOM05D000187 ORTHO05D000230 2.6e-08 63.5 57 59.6
Duzib268G0814 Durio zibethinus HOM05D000187 ORTHO05D000230 3.4e-08 63.2 59 55.9
Glyma.12G158500 Glycine max HOM05D000187 ORTHO05D000230 3.4e-08 63.2 58 62.1
Gohir.D13G152400 Gossypium hirsutum HOM05D000187 ORTHO05D000230 3.4e-08 63.2 57 59.6
Gorai.013G172300 Gossypium raimondii HOM05D000187 ORTHO05D000230 3.4e-08 63.2 57 59.6
Medtr2g078450 Medicago truncatula HOM05D000187 ORTHO05D000230 3.4e-08 63.2 181 29.8
Gohir.A13G147800 Gossypium hirsutum HOM05D000187 ORTHO05D000230 4.5e-08 62.8 57 57.9
PGR083G0122 Punica granatum HOM05D000187 ORTHO05D000230 4.5e-08 62.8 57 63.2
Gohir.D11G306400 Gossypium hirsutum HOM05D000187 ORTHO05D000230 5.8e-08 62.4 57 59.6
Gorai.007G325600 Gossypium raimondii HOM05D000187 ORTHO05D000230 5.8e-08 62.4 57 59.6
Duzib213G0202 Durio zibethinus HOM05D000187 ORTHO05D000230 7.6e-08 62.0 57 57.9
EL10Ac4g08284 Beta vulgaris HOM05D000187 ORTHO05D000230 1.0e-07 61.6 57 57.9
Thecc.07G100600 Theobroma cacao HOM05D000187 ORTHO05D000230 1.0e-07 61.6 57 57.9
Cpa.g.sc841.2 Carica papaya HOM05D000187 ORTHO05D000230 1.3e-07 61.2 57 57.9
CiPaw.12G116200 Carya illinoinensis HOM05D000187 ORTHO05D000230 1.3e-07 61.2 57 56.1
Manes.15G090400 Manihot esculenta HOM05D000187 ORTHO05D000230 1.3e-07 61.2 57 56.1
Gohir.A11G286700 Gossypium hirsutum HOM05D000187 ORTHO05D000230 1.7e-07 60.8 57 57.9
MELO3C016085.2 Cucumis melo HOM05D000187 ORTHO05D000230 2.9e-07 60.1 62 53.2
Eucgr.F01182 Eucalyptus grandis HOM05D000187 ORTHO05D000230 2.9e-07 60.1 57 59.6
Sc16g0007360 Simmondsia chinensis HOM05D000187 ORTHO05D000230 2.9e-07 60.1 58 60.3
ClCG11G017720 Citrullus lanatus HOM05D000187 ORTHO05D000230 5.0e-07 59.3 57 57.9
Duzib170G0195 Durio zibethinus HOM05D000187 ORTHO05D000230 5.0e-07 59.3 57 57.9
QL08p023141 Quercus lobata HOM05D000187 ORTHO05D000230 5.0e-07 59.3 57 59.6
AUR62036129 Chenopodium quinoa HOM05D000187 ORTHO05D000230 6.5e-07 58.9 57 52.6
Potri.001G373700 Populus trichocarpa HOM05D000187 ORTHO05D000230 6.5e-07 58.9 57 57.9
Potri.011G097100 Populus trichocarpa HOM05D000187 ORTHO05D000230 6.5e-07 58.9 57 61.4
Sabra11G0090200 Salix brachista HOM05D000187 ORTHO05D000230 8.4e-07 58.5 57 61.4
Sabra11G0091800 Salix brachista HOM05D000187 ORTHO05D000230 8.4e-07 58.5 57 61.4
AUR62019508 Chenopodium quinoa HOM05D000187 ORTHO05D000230 1.1e-06 58.2 57 52.6
Lalb_Chr25g0286151 Lupinus albus HOM05D000187 ORTHO05D000230 1.1e-06 58.2 274 26.6
Nn1g06360 Nelumbo nucifera HOM05D000187 ORTHO05D000230 1.1e-06 58.2 61 50.8
Sed0003262 Sechium edule HOM05D000187 ORTHO05D000230 1.1e-06 58.2 60 53.3
SGA_v2.0_scaffold73G24216 Striga asiatica HOM05D000187 ORTHO05D000230 1.1e-06 58.2 58 50.0
Atru.chr2.2348 Acer truncatum HOM05D000187 ORTHO05D000230 1.4e-06 57.8 57 56.1
Glyma.06G234300 Glycine max HOM05D000187 ORTHO05D000230 1.4e-06 57.8 58 58.6
Sopen12g005840 Solanum pennellii HOM05D000187 ORTHO05D000230 1.4e-06 57.8 61 55.7
SGA_v2.0_scaffold34G13761 Striga asiatica HOM05D000187 ORTHO05D000230 1.4e-06 57.8 58 48.3
CSS0038930 Camellia sinensis var. sinensis HOM05D000187 ORTHO05D000230 2.5e-06 57.0 57 54.4
MD03G1237000 Malus domestica HOM05D000187 ORTHO05D000230 2.5e-06 57.0 57 54.4
DCAR_013131 Daucus carota HOM05D000187 ORTHO05D000230 3.2e-06 56.6 57 52.6
Gohir.A01G059800 Gossypium hirsutum HOM05D000187 ORTHO05D000230 3.2e-06 56.6 57 56.1
CANSAT35G1306 Cannabis sativa HOM05D000187 ORTHO05D000230 4.2e-06 56.2 57 52.6
CsaV3_4G008450 Cucumis sativus L. HOM05D000187 ORTHO05D000230 4.2e-06 56.2 61 50.8
Lj3g0014756 Lotus japonicus HOM05D000187 ORTHO05D000230 4.2e-06 56.2 274 27.0
ClCG07G009880 Citrullus lanatus HOM05D000187 ORTHO05D000230 5.5e-06 55.8 59 50.8
MD11G1257600 Malus domestica HOM05D000187 ORTHO05D000230 5.5e-06 55.8 57 54.4
Prupe.4G172400 Prunus persica HOM05D000187 ORTHO05D000230 5.5e-06 55.8 57 56.1
GSVIVG01014254001 Vitis vinifera HOM05D000187 ORTHO05D000230 5.5e-06 55.8 57 57.9
Migut.M00762 Erythranthe guttata HOM05D000187 ORTHO05D000230 7.2e-06 55.5 57 49.1
Glyma.13G272700 Glycine max HOM05D000187 ORTHO05D000230 7.2e-06 55.5 182 29.1
Gohir.D01G046200 Gossypium hirsutum HOM05D000187 ORTHO05D000230 7.2e-06 55.5 57 54.4
Gorai.002G065600 Gossypium raimondii HOM05D000187 ORTHO05D000230 7.2e-06 55.5 57 54.4
CiPaw.11G165800 Carya illinoinensis HOM05D000187 ORTHO05D000230 9.3e-06 55.1 57 56.1
Lalb_Chr19g0134011 Lupinus albus HOM05D000187 ORTHO05D000230 9.3e-06 55.1 56 55.4


User provided reference genes

Program Settings