Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s1841g0080 Pisum sativum HOM05D007620 ORTHO05D009568 1.0e-127 461.5 606 100.0
Psat6g139880 Pisum sativum HOM05D007620 ORTHO05D009568 2.6e-86 323.9 653 84.5
Psat0s1841g0040 Pisum sativum HOM05D007620 ORTHO05D009568 3.0e-63 247.3 235 60.0
Phvul.008G151824 Phaseolus vulgaris HOM05D007620 ORTHO05D009568 2.5e-49 201.1 175 58.9
VMungo0720G2663 Vigna mungo HOM05D007620 ORTHO05D009568 1.4e-47 195.3 175 58.9
Glyma.20G222800 Glycine max HOM05D007620 ORTHO05D009568 3.7e-45 187.2 178 55.1
Glyma.10G166400 Glycine max HOM05D007620 ORTHO05D009568 3.0e-42 177.6 175 56.0
TPR.G22332 Trifolium pratense HOM05D007620 ORTHO05D009568 3.0e-42 177.6 177 57.6
Thecc.05G270800 Theobroma cacao HOM05D007620 ORTHO05D009568 6.6e-42 176.4 174 52.3
Haze_04424 Corylus avellana HOM05D007620 ORTHO05D009568 5.6e-41 173.3 175 52.6
Medtr1g080110 Medicago truncatula HOM05D007620 ORTHO05D009568 7.3e-41 172.9 145 68.3
Gohir.D11G257601 Gossypium hirsutum HOM05D007620 ORTHO05D009568 2.1e-40 171.4 172 51.7
Gorai.007G275900 Gossypium raimondii HOM05D007620 ORTHO05D009568 2.1e-40 171.4 172 51.7
QL03p030456 Quercus lobata HOM05D007620 ORTHO05D009568 2.8e-40 171.0 176 52.8
Hma1.2p1_1512F.1_g287900 Hydrangea macrophylla HOM05D007620 ORTHO05D009568 3.6e-40 170.6 174 52.9
FAN14G2205 Fragaria x ananassa HOM05D004964 ORTHO05D005918 6.2e-40 169.9 183 49.2
Lalb_Chr06g0168291 Lupinus albus HOM05D007620 ORTHO05D009568 1.1e-39 169.1 173 53.2
Lalb_Chr21g0311191 Lupinus albus HOM05D007620 ORTHO05D009568 5.2e-39 166.8 174 53.4
PSO210G6557 Papaver somniferum HOM05D007620 ORTHO05D009568 5.2e-39 166.8 176 49.4
Lsat_1_v5_gn_8_24880 Lactuca sativa HOM05D007620 ORTHO05D009568 2.0e-38 164.9 169 47.9
Nn1g02811 Nelumbo nucifera HOM05D007620 ORTHO05D009568 1.7e-37 161.8 175 50.3
Duzib177G1032 Durio zibethinus HOM05D007620 ORTHO05D009568 2.2e-37 161.4 172 46.5
CSS0021218 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 4.1e-36 157.1 178 48.9
CSS0034254 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 4.1e-36 157.1 178 48.9
CSS0013452 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 7.1e-36 156.4 178 47.8
MD04G1230300 Malus domestica HOM05D007620 ORTHO05D009568 4.6e-35 153.7 134 56.7
Ca_09448_v3 Cicer arietinum L. HOM05D007620 ORTHO05D009568 3.9e-34 150.6 180 44.4
CDE04G2606 Ceratophyllum demersum HOM05D007620 ORTHO05D009568 6.6e-34 149.8 178 46.6
Migut.F00879 Erythranthe guttata HOM05D007620 ORTHO05D009568 1.1e-33 149.1 183 47.0
Gohir.A11G247300 Gossypium hirsutum HOM05D007620 ORTHO05D009568 1.5e-33 148.7 97 68.0
Lj2C43T7 Lonicera japonica HOM05D007620 ORTHO05D009568 5.6e-33 146.7 133 51.9
Atru.chr2.986 Acer truncatum HOM05D007620 ORTHO05D009568 7.3e-33 146.4 176 44.3
THA.LOC104801727 Tarenaya hassleriana HOM05D007620 ORTHO05D009568 1.2e-32 145.6 179 43.6
Cc02_g08810 Coffea canephora HOM05D007620 ORTHO05D009568 1.6e-32 145.2 173 46.8
Aqoxy5G00210 Aquilegia oxysepala HOM05D007620 ORTHO05D009568 2.8e-32 144.4 158 47.5
Oeu026591.1 Olea europaea HOM05D007620 ORTHO05D009568 2.8e-32 144.4 172 45.3
MELO3C010128.2 Cucumis melo HOM05D007620 ORTHO05D009568 4.7e-32 143.7 175 43.4
Dinv24674 Davidia involucrata HOM05D007620 ORTHO05D009568 6.2e-32 143.3 174 45.4
TAR362G1297 Trochodendron aralioides HOM05D007620 ORTHO05D009568 1.4e-31 142.1 172 46.5
C05p62520 Brassica napus HOM05D007620 ORTHO05D009568 3.1e-31 141.0 173 43.9
Cfa006355 Carpinus fangiana HOM05D007620 ORTHO05D009568 4.0e-31 140.6 175 46.9
COL.COLO4_15485 Corchorus olitorius HOM05D007620 ORTHO05D009568 5.2e-31 140.2 99 61.6
CsaV3_1G045110 Cucumis sativus L. HOM05D007620 ORTHO05D009568 5.2e-31 140.2 175 42.9
BolC5t34907H Brassica oleracea HOM05D007620 ORTHO05D009568 1.5e-30 138.7 173 43.4
Solyc04g010060.2 Solanum lycopersicum HOM05D007620 ORTHO05D009568 1.5e-30 138.7 129 52.7
A05p42800 Brassica napus HOM05D007620 ORTHO05D009568 2.6e-30 137.9 173 42.8
BraA05t22972Z Brassica rapa HOM05D007620 ORTHO05D009568 2.6e-30 137.9 173 42.8
CANSAT21G0311 Cannabis sativa HOM05D007620 ORTHO05D009568 3.4e-30 137.5 178 38.8
ClCG03G009720 Citrullus lanatus HOM05D007620 ORTHO05D009568 3.4e-30 137.5 170 42.9
Sed0010835 Sechium edule HOM05D007620 ORTHO05D009568 7.6e-30 136.3 173 42.8
Ciclev10019446m.g Citrus clementina HOM05D007620 ORTHO05D009568 9.9e-30 136.0 150 46.0
EL10Ac4g09018 Beta vulgaris HOM05D007620 ORTHO05D009568 1.3e-29 135.6 173 42.2
FvH4_6g01920 Fragaria vesca HOM05D007620 ORTHO05D009568 2.9e-29 134.4 182 42.9
Lj5g0020911 Lotus japonicus HOM05D007620 ORTHO05D009568 2.9e-29 134.4 150 50.0
FAN05G4025 Fragaria x ananassa HOM05D004964 ORTHO05D005918 3.8e-29 134.0 177 44.6
FAN05G4826 Fragaria x ananassa HOM05D004964 ORTHO05D005918 3.8e-29 134.0 177 44.6
FAN02G1272 Fragaria x ananassa HOM05D004964 ORTHO05D005918 6.4e-29 133.3 183 42.6
Sc09g0004220 Simmondsia chinensis HOM05D007620 ORTHO05D009568 1.4e-28 132.1 173 40.5
Sabra13G0043000 Salix brachista HOM05D007620 ORTHO05D009568 1.9e-28 131.7 186 45.2
Potri.013G047000 Populus trichocarpa HOM05D007620 ORTHO05D009568 7.1e-28 129.8 177 42.9
Potri.019G019300 Populus trichocarpa HOM05D007620 ORTHO05D009568 1.6e-27 128.6 178 42.1
ATR0736G141 Amborella trichopoda HOM05D007620 ORTHO05D009568 2.1e-27 128.3 99 59.6
RcHm_v2.0_Chr3g0449651 Rosa chinensis HOM05D007620 ORTHO05D009568 6.0e-27 126.7 183 41.5
SGA_v2.0_scaffold13G06478 Striga asiatica HOM05D007620 ORTHO05D009568 1.3e-26 125.6 100 56.0
Lj1g0023548 Lotus japonicus HOM05D007620 ORTHO05D009568 3.0e-26 124.4 173 41.0
GSVIVG01023503001 Vitis vinifera HOM05D007620 ORTHO05D009568 5.1e-26 123.6 174 43.1
Lj2C43T8 Lonicera japonica HOM05D007620 ORTHO05D009568 8.7e-26 122.9 150 42.0
CSS0031974 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 1.1e-25 122.5 175 41.7
MD12G1247200 Malus domestica HOM05D007620 ORTHO05D009568 3.3e-25 120.9 99 59.6
ECA233G5729 Erigeron canadensis HOM05D007620 ORTHO05D009568 1.1e-23 115.9 77 66.2
Manes.08G053900 Manihot esculenta HOM05D007620 ORTHO05D009568 6.9e-23 113.2 174 36.8
MD12G1247400 Malus domestica HOM05D007620 ORTHO05D009568 9.0e-23 112.8 114 50.0
HPP92_005407 Vanilla planifolia HOM05D007620 ORTHO05D009568 1.5e-22 112.1 133 42.1
PGR004G2089 Punica granatum HOM05D007620 ORTHO05D009568 2.0e-22 111.7 135 43.0
SalBow6G2000 Salvia bowleyana HOM05D007620 ORTHO05D009568 2.6e-22 111.3 75 65.3
Sp3g03610 Schrenkiella parvula HOM05D007620 ORTHO05D009568 2.6e-22 111.3 188 37.8
Glyma.03G251200 Glycine max HOM05D007620 ORTHO05D009568 2.4e-20 104.8 134 44.8
DCAR_023086 Daucus carota HOM05D007620 ORTHO05D009568 4.2e-20 104.0 175 36.6
Eucgr.H04228 Eucalyptus grandis HOM05D007620 ORTHO05D009568 1.6e-19 102.1 170 40.0
PGSC0003DMG400011475 Solanum tuberosum HOM05D007620 ORTHO05D009568 3.5e-19 100.9 147 39.5
CAN.G358.141 Capsicum annuum HOM05D007620 ORTHO05D009568 4.6e-19 100.5 147 43.5
Peaxi162Scf00528g00227 Petunia axillaris HOM05D007620 ORTHO05D009568 4.6e-19 100.5 147 41.5
AUR62040929 Chenopodium quinoa HOM05D007620 ORTHO05D009568 6.0e-19 100.1 140 42.1
AL3G14890 Arabidopsis lyrata HOM05D007620 ORTHO05D009568 1.8e-18 98.6 184 34.2
AUR62004839 Chenopodium quinoa HOM05D007620 ORTHO05D009568 1.8e-18 98.6 143 42.0
Aa31LG5G15170 Aethionema arabicum HOM05D007620 ORTHO05D009568 2.3e-18 98.2 181 32.6
Glyma.19G248500 Glycine max HOM05D007620 ORTHO05D009568 5.1e-18 97.1 118 44.9
AT3G04760 Arabidopsis thaliana HOM05D007620 ORTHO05D009568 1.5e-17 95.5 188 34.6
Carub.0003s0393 Capsella rubella HOM05D007620 ORTHO05D009568 1.9e-17 95.1 194 34.5
PGR004G1481 Punica granatum HOM05D007620 ORTHO05D009568 3.6e-16 90.9 69 60.9
CARHR079010 Cardamine hirsuta HOM05D007620 ORTHO05D009568 4.8e-16 90.5 189 32.3
Ah.06g191910 Amaranthus hybridus HOM05D007620 ORTHO05D009568 8.1e-16 89.7 138 39.1
Prupe.6G350200 Prunus persica HOM05D007620 ORTHO05D009568 2.9e-13 81.3 75 54.7
COL.COLO4_15482 Corchorus olitorius HOM05D007620 ORTHO05D009568 2.3e-10 71.6 53 60.4
Ca_05489_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 6.7e-10 70.1 124 33.9
Ca_29619_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 6.7e-10 70.1 124 33.9
CDE01G0171 Ceratophyllum demersum HOM05D007620 ORTHO05D009568 2.5e-09 68.2 86 39.5
Thhalv10022408m.g Eutrema salsugineum HOM05D007620 ORTHO05D009568 2.8e-08 64.7 43 62.8
Actinidia10267 Actinidia chinensis HOM05D006739 ORTHO05D008402 3.7e-08 64.3 152 33.6
Sopen04g005200 Solanum pennellii HOM05D007620 ORTHO05D009568 3.7e-08 64.3 45 60.0
Nitab4.5_0006737g0010 Nicotiana tabacum HOM05D007620 ORTHO05D009568 6.2e-08 63.5 43 62.8
Lj2C43T6 Lonicera japonica HOM05D017878 ORTHO05D018225 2.4e-07 61.6 56 48.2
Nitab4.5_0003780g0130 Nicotiana tabacum HOM05D007620 ORTHO05D009568 2.4e-07 61.6 43 62.8
THA.LOC104808562 Tarenaya hassleriana HOM05D000424 ORTHO05D000355 2.4e-07 61.6 98 32.7
Migut.D02192 Erythranthe guttata HOM05D007402 ORTHO05D003673 6.9e-07 60.1 120 30.0
CANSAT56G3111 Cannabis sativa HOM05D003900 ORTHO05D005009 9.0e-07 59.7 160 29.4
Hund21880 Selenicereus undatus HOM05D000162 ORTHO05D000090 1.5e-06 58.9 93 31.2
Sc11g0002770 Simmondsia chinensis HOM05D007570 ORTHO05D009365 1.5e-06 58.9 95 35.8
Hma1.2p1_1572F.1_g291500 Hydrangea macrophylla HOM05D000424 ORTHO05D000355 2.0e-06 58.5 96 29.2
CARHR120500 Cardamine hirsuta HOM05D007402 ORTHO05D003673 2.6e-06 58.2 98 34.7
Lj2P1035T18 Lonicera japonica HOM05D007402 ORTHO05D003673 3.4e-06 57.8 120 30.8
SMO143G0105 Selaginella moellendorffii HOM05D017046 ORTHO05D010847 3.4e-06 57.8 89 28.1
SMO367G1176 Selaginella moellendorffii HOM05D009701 ORTHO05D000003 3.4e-06 57.8 83 31.3
BcaB02g10117 Brassica carinata HOM05D007402 ORTHO05D003673 4.5e-06 57.4 98 33.7
Sopen02g016380 Solanum pennellii HOM05D006569 ORTHO05D007515 4.5e-06 57.4 93 25.8
Atru.BG.118.p Acer truncatum HOM05D007402 ORTHO05D003673 5.8e-06 57.0 119 29.4
Actinidia08438 Actinidia chinensis HOM05D000162 ORTHO05D000090 5.8e-06 57.0 91 35.2
DCAR_018829 Daucus carota HOM05D007402 ORTHO05D003673 5.8e-06 57.0 79 34.2
Lalb_Chr19g0137401 Lupinus albus HOM05D007402 ORTHO05D003673 5.8e-06 57.0 81 33.3
PSO832G3824 Papaver somniferum HOM05D007155 ORTHO05D003034 5.8e-06 57.0 111 27.9
CDE07G0667 Ceratophyllum demersum HOM05D001587 ORTHO05D002654 7.6e-06 56.6 90 35.6
Sp4g10640 Schrenkiella parvula HOM05D007402 ORTHO05D003673 7.6e-06 56.6 98 33.7


User provided reference genes

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