Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s1841g0040 Pisum sativum HOM05D007620 ORTHO05D009568 3.8e-110 402.9 528 100.0
Psat6g139880 Pisum sativum HOM05D007620 ORTHO05D009568 8.5e-70 268.9 653 70.6
Psat0s1841g0080 Pisum sativum HOM05D007620 ORTHO05D009568 4.5e-63 246.5 235 60.0
Lalb_Chr06g0168291 Lupinus albus HOM05D007620 ORTHO05D009568 3.4e-34 150.6 130 60.8
TPR.G22332 Trifolium pratense HOM05D007620 ORTHO05D009568 1.3e-33 148.7 131 60.3
Medtr1g080110 Medicago truncatula HOM05D007620 ORTHO05D009568 6.4e-33 146.4 137 63.5
Lalb_Chr21g0311191 Lupinus albus HOM05D007620 ORTHO05D009568 9.2e-32 142.5 131 60.3
Phvul.008G151824 Phaseolus vulgaris HOM05D007620 ORTHO05D009568 2.3e-27 127.9 217 39.2
Lj5g0020911 Lotus japonicus HOM05D007620 ORTHO05D009568 1.1e-24 119.0 142 47.2
VMungo0720G2663 Vigna mungo HOM05D007620 ORTHO05D009568 2.4e-24 117.9 215 36.7
Glyma.20G222800 Glycine max HOM05D007620 ORTHO05D009568 5.4e-24 116.7 135 49.6
Hma1.2p1_1512F.1_g287900 Hydrangea macrophylla HOM05D007620 ORTHO05D009568 7.8e-23 112.8 216 37.0
QL03p030456 Quercus lobata HOM05D007620 ORTHO05D009568 1.7e-22 111.7 217 35.9
FAN14G2205 Fragaria x ananassa HOM05D004964 ORTHO05D005918 3.9e-22 110.5 221 36.7
Haze_04424 Corylus avellana HOM05D007620 ORTHO05D009568 5.1e-22 110.2 219 36.1
Cfa006355 Carpinus fangiana HOM05D007620 ORTHO05D009568 1.9e-21 108.2 133 48.9
FAN05G4025 Fragaria x ananassa HOM05D004964 ORTHO05D005918 2.5e-21 107.8 137 47.4
FAN05G4826 Fragaria x ananassa HOM05D004964 ORTHO05D005918 2.5e-21 107.8 137 47.4
FvH4_6g01920 Fragaria vesca HOM05D007620 ORTHO05D009568 4.3e-21 107.1 135 45.9
Glyma.10G166400 Glycine max HOM05D007620 ORTHO05D009568 9.6e-21 105.9 132 51.5
TAR362G1297 Trochodendron aralioides HOM05D007620 ORTHO05D009568 9.6e-21 105.9 131 48.1
FAN02G1272 Fragaria x ananassa HOM05D004964 ORTHO05D005918 1.2e-20 105.5 136 45.6
GSVIVG01023503001 Vitis vinifera HOM05D007620 ORTHO05D009568 1.6e-20 105.1 130 46.2
Glyma.03G251200 Glycine max HOM05D007620 ORTHO05D009568 3.6e-20 104.0 129 47.3
Potri.019G019300 Populus trichocarpa HOM05D007620 ORTHO05D009568 4.7e-20 103.6 223 44.4
Thecc.05G270800 Theobroma cacao HOM05D007620 ORTHO05D009568 6.2e-20 103.2 217 31.8
Lj1g0023548 Lotus japonicus HOM05D007620 ORTHO05D009568 1.8e-19 101.7 130 43.1
MD04G1230300 Malus domestica HOM05D007620 ORTHO05D009568 2.4e-19 101.3 176 39.8
Gohir.D11G257601 Gossypium hirsutum HOM05D007620 ORTHO05D009568 4.0e-19 100.5 214 33.6
Gorai.007G275900 Gossypium raimondii HOM05D007620 ORTHO05D009568 4.0e-19 100.5 214 33.6
Lsat_1_v5_gn_8_24880 Lactuca sativa HOM05D007620 ORTHO05D009568 5.2e-19 100.1 211 30.8
Nn1g02811 Nelumbo nucifera HOM05D007620 ORTHO05D009568 6.8e-19 99.8 217 33.2
RcHm_v2.0_Chr3g0449651 Rosa chinensis HOM05D007620 ORTHO05D009568 8.9e-19 99.4 135 43.0
Potri.013G047000 Populus trichocarpa HOM05D007620 ORTHO05D009568 1.5e-18 98.6 134 44.0
PSO210G6557 Papaver somniferum HOM05D007620 ORTHO05D009568 2.0e-18 98.2 218 32.6
Sabra13G0043000 Salix brachista HOM05D007620 ORTHO05D009568 3.4e-18 97.4 137 45.3
Dinv24674 Davidia involucrata HOM05D007620 ORTHO05D009568 5.8e-18 96.7 127 48.8
Duzib177G1032 Durio zibethinus HOM05D007620 ORTHO05D009568 5.8e-18 96.7 217 30.4
Glyma.19G248500 Glycine max HOM05D007620 ORTHO05D009568 1.3e-17 95.5 81 58.0
Manes.08G053900 Manihot esculenta HOM05D007620 ORTHO05D009568 2.9e-17 94.4 132 40.9
CSS0021218 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 1.4e-16 92.0 218 32.6
CSS0034254 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 1.4e-16 92.0 218 32.6
CSS0013452 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 2.4e-16 91.3 218 31.7
Ca_09448_v3 Cicer arietinum L. HOM05D007620 ORTHO05D009568 3.2e-16 90.9 224 31.2
MELO3C010128.2 Cucumis melo HOM05D007620 ORTHO05D009568 4.2e-16 90.5 212 31.1
DCAR_023086 Daucus carota HOM05D007620 ORTHO05D009568 4.2e-16 90.5 63 61.9
CDE04G2606 Ceratophyllum demersum HOM05D007620 ORTHO05D009568 1.2e-15 89.0 217 32.3
AUR62040929 Chenopodium quinoa HOM05D007620 ORTHO05D009568 1.2e-15 89.0 131 38.9
AUR62004839 Chenopodium quinoa HOM05D007620 ORTHO05D009568 1.6e-15 88.6 131 38.9
Sp3g03610 Schrenkiella parvula HOM05D007620 ORTHO05D009568 6.0e-15 86.7 144 38.9
MD12G1247400 Malus domestica HOM05D007620 ORTHO05D009568 7.8e-15 86.3 64 60.9
CsaV3_1G045110 Cucumis sativus L. HOM05D007620 ORTHO05D009568 1.0e-14 85.9 212 30.7
Migut.F00879 Erythranthe guttata HOM05D007620 ORTHO05D009568 1.3e-14 85.5 224 30.4
PGR004G2089 Punica granatum HOM05D007620 ORTHO05D009568 1.7e-14 85.1 128 41.4
CANSAT21G0311 Cannabis sativa HOM05D007620 ORTHO05D009568 5.1e-14 83.6 59 62.7
COL.COLO4_15485 Corchorus olitorius HOM05D007620 ORTHO05D009568 5.1e-14 83.6 141 34.8
Gohir.A11G247300 Gossypium hirsutum HOM05D007620 ORTHO05D009568 5.1e-14 83.6 139 36.0
Lj2C43T7 Lonicera japonica HOM05D007620 ORTHO05D009568 5.1e-14 83.6 175 31.4
AT3G04760 Arabidopsis thaliana HOM05D007620 ORTHO05D009568 8.7e-14 82.8 146 38.4
Oeu026591.1 Olea europaea HOM05D007620 ORTHO05D009568 8.7e-14 82.8 129 39.5
Cc02_g08810 Coffea canephora HOM05D007620 ORTHO05D009568 1.1e-13 82.4 130 41.5
Atru.chr2.986 Acer truncatum HOM05D007620 ORTHO05D009568 1.5e-13 82.0 218 28.4
AL3G14890 Arabidopsis lyrata HOM05D007620 ORTHO05D009568 1.5e-13 82.0 142 37.3
ClCG03G009720 Citrullus lanatus HOM05D007620 ORTHO05D009568 1.5e-13 82.0 212 30.2
Carub.0003s0393 Capsella rubella HOM05D007620 ORTHO05D009568 4.3e-13 80.5 150 36.0
EL10Ac4g09018 Beta vulgaris HOM05D007620 ORTHO05D009568 9.6e-13 79.3 130 36.2
A05p42800 Brassica napus HOM05D007620 ORTHO05D009568 1.6e-12 78.6 219 28.8
BraA05t22972Z Brassica rapa HOM05D007620 ORTHO05D009568 1.6e-12 78.6 219 28.8
Aqoxy5G00210 Aquilegia oxysepala HOM05D007620 ORTHO05D009568 2.1e-12 78.2 64 51.6
C05p62520 Brassica napus HOM05D007620 ORTHO05D009568 2.1e-12 78.2 215 30.2
Eucgr.H04228 Eucalyptus grandis HOM05D007620 ORTHO05D009568 2.1e-12 78.2 127 41.7
ATR0736G141 Amborella trichopoda HOM05D007620 ORTHO05D009568 2.8e-12 77.8 61 59.0
Ah.06g191910 Amaranthus hybridus HOM05D007620 ORTHO05D009568 3.6e-12 77.4 130 36.9
Sed0010835 Sechium edule HOM05D007620 ORTHO05D009568 3.6e-12 77.4 213 29.1
BolC5t34907H Brassica oleracea HOM05D007620 ORTHO05D009568 8.1e-12 76.3 215 29.8
Peaxi162Scf00528g00227 Petunia axillaris HOM05D007620 ORTHO05D009568 8.1e-12 76.3 117 40.2
MD12G1247200 Malus domestica HOM05D007620 ORTHO05D009568 1.1e-11 75.9 54 63.0
Aa31LG5G15170 Aethionema arabicum HOM05D007620 ORTHO05D009568 1.4e-11 75.5 154 37.7
CARHR079010 Cardamine hirsuta HOM05D007620 ORTHO05D009568 1.8e-11 75.1 146 41.1
THA.LOC104801727 Tarenaya hassleriana HOM05D007620 ORTHO05D009568 1.8e-11 75.1 222 27.9
COL.COLO4_15482 Corchorus olitorius HOM05D007620 ORTHO05D009568 2.4e-11 74.7 53 62.3
PGR004G1481 Punica granatum HOM05D007620 ORTHO05D009568 2.4e-11 74.7 62 56.5
Ciclev10019446m.g Citrus clementina HOM05D007620 ORTHO05D009568 3.1e-11 74.3 216 28.2
Prupe.6G350200 Prunus persica HOM05D007620 ORTHO05D009568 6.9e-11 73.2 51 62.7
Sc09g0004220 Simmondsia chinensis HOM05D007620 ORTHO05D009568 6.9e-11 73.2 54 61.1
Solyc04g010060.2 Solanum lycopersicum HOM05D007620 ORTHO05D009568 2.0e-10 71.6 146 33.6
PGSC0003DMG400011475 Solanum tuberosum HOM05D007620 ORTHO05D009568 2.2e-09 68.2 61 52.5
Lj2C43T6 Lonicera japonica HOM05D017878 ORTHO05D018225 8.4e-09 66.2 53 49.1
CAN.G358.141 Capsicum annuum HOM05D007620 ORTHO05D009568 1.9e-08 65.1 60 58.3
SGA_v2.0_scaffold13G06478 Striga asiatica HOM05D007620 ORTHO05D009568 1.9e-08 65.1 58 53.4
HPP92_005406 Vanilla planifolia HOM05D006918 ORTHO05D008525 4.2e-08 63.9 74 37.8
Lj2C43T8 Lonicera japonica HOM05D007620 ORTHO05D009568 1.0e-06 59.3 193 26.4
ECA233G5729 Erigeron canadensis HOM05D007620 ORTHO05D009568 1.3e-06 58.9 119 32.8
CSS0031974 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 3.9e-06 57.4 217 27.2


User provided reference genes

Program Settings