Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s1573g0200 Pisum sativum HOM05D000589 ORTHO05D000401 1.4e-72 276.2 143 100.0
Psat3g071440 Pisum sativum HOM05D000589 ORTHO05D000401 3.1e-59 231.9 143 85.3
Psat4g220720 Pisum sativum HOM05D000589 ORTHO05D000401 3.1e-59 231.9 143 85.3
Psat5g257800 Pisum sativum HOM05D000214 ORTHO05D000401 3.1e-59 231.9 143 85.3
Psat7g167200 Pisum sativum HOM05D000589 ORTHO05D000401 3.1e-59 231.9 143 85.3
Psat7g215720 Pisum sativum HOM05D000589 ORTHO05D000401 3.1e-59 231.9 143 85.3
Psat0ss1279g0240 Pisum sativum HOM05D000589 ORTHO05D000401 5.0e-57 224.6 143 83.2
Psat2g006720 Pisum sativum HOM05D000589 ORTHO05D000401 2.5e-56 222.2 143 81.8
Psat4g018520 Pisum sativum HOM05D000589 ORTHO05D000401 2.1e-55 219.2 133 87.2
Psat0s4925g0040 Pisum sativum HOM05D000589 ORTHO05D000401 8.8e-54 213.8 133 84.2
Psat7g031880 Pisum sativum HOM05D000214 ORTHO05D000131 1.8e-51 206.1 117 91.5
Psat5g094880 Pisum sativum HOM05D000589 ORTHO05D000401 2.3e-41 172.6 108 85.2
Psat3g201760 Pisum sativum HOM05D000589 ORTHO05D000401 8.0e-39 164.1 109 83.5
Psat5g141560 Pisum sativum HOM05D000214 ORTHO05D000401 5.2e-38 161.4 103 85.4
Psat6g187720 Pisum sativum HOM05D000589 ORTHO05D000401 3.1e-35 152.1 96 86.5
Medtr7g107340 Medicago truncatula HOM05D000589 ORTHO05D000401 5.6e-32 141.4 152 58.6
Psat7g219080 Pisum sativum HOM05D000589 ORTHO05D000401 2.0e-26 122.9 71 83.1
Glyma.19G095100 Glycine max HOM05D000589 ORTHO05D000401 4.6e-18 95.1 119 47.9
Glyma.07G140900 Glycine max HOM05D001576 ORTHO05D000401 1.0e-17 94.0 117 49.6
Medtr7g088160 Medicago truncatula HOM05D002397 ORTHO05D000401 2.3e-17 92.8 114 50.0
Glyma.17G168800 Glycine max HOM05D001576 ORTHO05D000401 5.0e-17 91.7 142 42.3
Glyma.09G103200 Glycine max HOM05D000589 ORTHO05D000401 1.5e-16 90.1 118 46.6
Psat6g017600 Pisum sativum HOM05D000589 ORTHO05D000401 1.5e-16 90.1 48 83.3
TPR.G38844 Trifolium pratense HOM05D000589 ORTHO05D000401 1.5e-16 90.1 113 53.1
TPR.G23664 Trifolium pratense HOM05D000589 ORTHO05D000401 3.3e-16 89.0 112 50.0
Medtr4g083510 Medicago truncatula HOM05D000589 ORTHO05D000401 4.3e-16 88.6 140 45.0
Ca_08337_v3 Cicer arietinum L. HOM05D002397 ORTHO05D002667 1.2e-15 87.0 161 41.6
Medtr4g063670 Medicago truncatula HOM05D000589 ORTHO05D000401 1.2e-15 87.0 110 52.7
Glyma.04G114000 Glycine max HOM05D000589 ORTHO05D000401 2.1e-15 86.3 115 40.9
Glyma.06G285600 Glycine max HOM05D000589 ORTHO05D000401 2.8e-15 85.9 118 45.8
TPR.G21478 Trifolium pratense HOM05D000589 ORTHO05D000401 8.1e-15 84.3 113 52.2
Medtr0867s0010 Medicago truncatula HOM05D001576 ORTHO05D000401 1.1e-14 84.0 152 40.8
Medtr1g051185 Medicago truncatula HOM05D000589 ORTHO05D000401 4.0e-14 82.0 109 53.2
Psat2g133640 Pisum sativum HOM05D000214 ORTHO05D000131 1.2e-13 80.5 89 58.4
Sp5g15617 Schrenkiella parvula HOM05D000589 ORTHO05D000401 1.1e-11 73.9 117 38.5
Glyma.12G112700 Glycine max HOM05D001576 ORTHO05D000401 1.4e-11 73.6 142 38.0
Psat6g013200 Pisum sativum HOM05D000589 ORTHO05D000401 1.2e-10 70.5 92 56.5
Carub.0336s0001 Capsella rubella HOM05D000589 ORTHO05D000401 6.0e-10 68.2 138 37.0
BolC6t38795H Brassica oleracea HOM05D001308 ORTHO05D000401 1.3e-09 67.0 114 37.7
Medtr7g114170 Medicago truncatula HOM05D000589 ORTHO05D000401 1.7e-09 66.6 149 38.9
Carub.0006s1187 Capsella rubella HOM05D000589 ORTHO05D000401 2.3e-09 66.2 138 37.0
Glyma.08G292200 Glycine max HOM05D000589 ORTHO05D000401 2.3e-09 66.2 118 40.7
BolC2t11251H Brassica oleracea HOM05D000589 ORTHO05D000401 8.6e-09 64.3 109 39.4
BolC4t26616H Brassica oleracea HOM05D000589 ORTHO05D000401 1.1e-08 63.9 113 36.3
TPR.G35801 Trifolium pratense HOM05D000589 ORTHO05D000401 1.5e-08 63.5 110 40.9
Glyma.01G062500 Glycine max HOM05D001576 ORTHO05D000401 2.5e-08 62.8 137 35.8
Medtr8g015750 Medicago truncatula HOM05D000589 ORTHO05D000401 2.5e-08 62.8 152 40.8
BolC3t14123H Brassica oleracea HOM05D000589 ORTHO05D000401 3.3e-08 62.4 109 38.5
BolC2t10503H Brassica oleracea HOM05D000589 ORTHO05D000401 4.3e-08 62.0 110 40.0
BolC7t42664H Brassica oleracea HOM05D000589 ORTHO05D000401 4.3e-08 62.0 56 46.4
BolC7t44270H Brassica oleracea HOM05D000126 ORTHO05D000085 5.6e-08 61.6 112 37.5
Medtr3g069460 Medicago truncatula HOM05D000589 ORTHO05D000401 7.3e-08 61.2 55 56.4
BolC6t39627H Brassica oleracea HOM05D001308 ORTHO05D000401 1.2e-07 60.5 54 46.3
BolC5t30732H Brassica oleracea HOM05D000589 ORTHO05D005968 2.1e-07 59.7 109 33.0
CANSAT21G0176 Cannabis sativa HOM05D016588 ORTHO05D000401 2.1e-07 59.7 145 31.7
BolC7t42127H Brassica oleracea HOM05D000589 ORTHO05D000401 2.8e-07 59.3 113 32.7
Medtr4g046740 Medicago truncatula HOM05D035725 ORTHO05D000401 2.8e-07 59.3 107 43.9
RcHm_v2.0_Chr6g0270241 Rosa chinensis HOM05D001576 ORTHO05D000401 2.8e-07 59.3 117 35.9
SGA_v2.0_scaffold167G38458 Striga asiatica HOM05D001576 ORTHO05D000401 2.8e-07 59.3 146 32.2
BolC9t53773H Brassica oleracea HOM05D000589 ORTHO05D000401 3.6e-07 58.9 114 31.6
AL8G16460 Arabidopsis lyrata HOM05D000589 ORTHO05D000401 6.2e-07 58.2 143 31.5
BolC4t27712H Brassica oleracea HOM05D000589 ORTHO05D000401 6.2e-07 58.2 141 30.5
BcaC07g36993 Brassica carinata HOM05D000589 ORTHO05D000401 8.1e-07 57.8 117 34.2
BolC2t08273H Brassica oleracea HOM05D000589 ORTHO05D000401 8.1e-07 57.8 56 42.9
AL8G33970 Arabidopsis lyrata HOM05D000589 ORTHO05D000401 1.1e-06 57.4 143 31.5
AT5G41240 Arabidopsis thaliana HOM05D002591 ORTHO05D002791 1.1e-06 57.4 115 35.7
BcaC01g01358 Brassica carinata HOM05D000589 ORTHO05D000401 1.8e-06 56.6 147 29.9
BcaC06g34273 Brassica carinata HOM05D000589 ORTHO05D000401 1.8e-06 56.6 143 31.5
BcaC09g48715 Brassica carinata HOM05D000589 ORTHO05D000401 1.8e-06 56.6 110 34.5
BolC5t31626H Brassica oleracea HOM05D000589 ORTHO05D000401 1.8e-06 56.6 109 33.9
BolC2t08934H Brassica oleracea HOM05D000589 ORTHO05D000401 2.4e-06 56.2 120 36.7
BolC3t18868H Brassica oleracea HOM05D001308 ORTHO05D000401 2.4e-06 56.2 55 43.6
AT3G47680 Arabidopsis thaliana HOM05D000589 ORTHO05D000401 4.0e-06 55.5 109 33.9
BolC7t43862H Brassica oleracea HOM05D000589 ORTHO05D000401 4.0e-06 55.5 57 40.4
AT5G41220 Arabidopsis thaliana HOM05D002591 ORTHO05D002791 5.2e-06 55.1 116 31.0
BolC2t09098H Brassica oleracea HOM05D000589 ORTHO05D000401 5.2e-06 55.1 112 32.1
Carub.0004s0729 Capsella rubella HOM05D000589 ORTHO05D000401 5.2e-06 55.1 108 38.9
AL8G21500 Arabidopsis lyrata HOM05D000589 ORTHO05D000401 8.9e-06 54.3 152 32.2
BcaB05g23161 Brassica carinata HOM05D000589 ORTHO05D000401 8.9e-06 54.3 143 31.5
BolC3t16377H Brassica oleracea HOM05D000589 ORTHO05D000401 8.9e-06 54.3 55 41.8
BolC6t39513H Brassica oleracea HOM05D000589 ORTHO05D000401 8.9e-06 54.3 112 33.9
Medtr6g081150 Medicago truncatula HOM05D001576 ORTHO05D000401 8.9e-06 54.3 88 42.0
Psat6g043560 Pisum sativum HOM05D000589 ORTHO05D000401 8.9e-06 54.3 96 43.8
QL02p093127 Quercus lobata HOM05D001576 ORTHO05D000401 8.9e-06 54.3 118 33.9


User provided reference genes

Program Settings