Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s1568g0040 Pisum sativum HOM05D003771 ORTHO05D004396 5.8e-62 240.7 123 100.0
Ca_17443_v3 Cicer arietinum L. HOM05D003771 ORTHO05D004396 1.6e-35 152.9 90 85.6
Lj4g0002190 Lotus japonicus HOM05D003771 ORTHO05D004396 1.6e-35 152.9 90 85.6
Psat7g020760 Pisum sativum HOM05D003771 ORTHO05D004396 1.6e-35 152.9 90 85.6
Potri.018G149400 Populus trichocarpa HOM05D003771 ORTHO05D004396 1.6e-35 152.9 90 85.6
TPR.G25458 Trifolium pratense HOM05D003771 ORTHO05D004396 1.6e-35 152.9 90 85.6
CANSAT64G2070 Cannabis sativa HOM05D003771 ORTHO05D004396 2.7e-35 152.1 90 84.4
CiPaw.15G162500 Carya illinoinensis HOM05D003771 ORTHO05D004396 2.7e-35 152.1 90 85.6
Eucgr.E04317 Eucalyptus grandis HOM05D003771 ORTHO05D004396 3.5e-35 151.8 90 85.6
Glyma.05G220300 Glycine max HOM05D003771 ORTHO05D004396 3.5e-35 151.8 90 84.4
Glyma.08G026700 Glycine max HOM05D003771 ORTHO05D004396 3.5e-35 151.8 90 84.4
MD04G1002300 Malus domestica HOM05D003771 ORTHO05D004396 3.5e-35 151.8 90 85.6
RcHm_v2.0_Chr4g0384941 Rosa chinensis HOM05D003771 ORTHO05D004396 3.5e-35 151.8 90 84.4
COL.COLO4_37655 Corchorus olitorius HOM05D003771 ORTHO05D004396 4.6e-35 151.4 90 84.4
Medtr8g100105 Medicago truncatula HOM05D003771 ORTHO05D004396 4.6e-35 151.4 87 87.4
Prupe.7G042600 Prunus persica HOM05D003771 ORTHO05D004396 4.6e-35 151.4 90 84.4
VMungo0251G3699 Vigna mungo HOM05D003771 ORTHO05D004396 4.6e-35 151.4 90 84.4
FvH4_4g00210 Fragaria vesca HOM05D003771 ORTHO05D004396 6.0e-35 151.0 90 83.3
FAN12G2055 Fragaria x ananassa HOM05D003771 ORTHO05D004396 6.0e-35 151.0 90 83.3
FAN22G1465 Fragaria x ananassa HOM05D003771 ORTHO05D004396 6.0e-35 151.0 90 83.3
QL11p007303 Quercus lobata HOM05D003771 ORTHO05D004396 6.0e-35 151.0 90 84.4
Sp6g13880 Schrenkiella parvula HOM05D003771 ORTHO05D004396 6.0e-35 151.0 90 84.4
SGA_v2.0_scaffold21G09599 Striga asiatica HOM05D003771 ORTHO05D004396 6.0e-35 151.0 90 83.3
Haze_19080 Corylus avellana HOM05D003771 ORTHO05D004396 7.9e-35 150.6 90 84.4
Sabra18G0126200 Salix brachista HOM05D003771 ORTHO05D004396 7.9e-35 150.6 90 84.4
Thecc.09G205400 Theobroma cacao HOM05D003771 ORTHO05D004396 7.9e-35 150.6 90 84.4
CSS0004980 Camellia sinensis var. sinensis HOM05D003771 ORTHO05D004396 1.0e-34 150.2 90 83.3
CSS0043776 Camellia sinensis var. sinensis HOM05D003771 ORTHO05D004396 1.0e-34 150.2 90 83.3
DCAR_020453 Daucus carota HOM05D003771 ORTHO05D004396 1.0e-34 150.2 90 83.3
Dinv12623 Davidia involucrata HOM05D003771 ORTHO05D004396 1.0e-34 150.2 90 83.3
MD15G1427900 Malus domestica HOM05D003771 ORTHO05D004396 1.0e-34 150.2 90 83.3
TAR383G0820 Trochodendron aralioides HOM05D003771 ORTHO05D004396 1.0e-34 150.2 90 83.3
CDE07G1201 Ceratophyllum demersum HOM05D003771 ORTHO05D004396 1.3e-34 149.8 90 84.4
Migut.L01925 Erythranthe guttata HOM05D003771 ORTHO05D004396 1.3e-34 149.8 90 83.3
Lju50C19G3 Lonicera japonica HOM05D003771 ORTHO05D004396 1.3e-34 149.8 90 83.3
Aqoxy3G02691 Aquilegia oxysepala HOM05D003771 ORTHO05D004396 1.8e-34 149.4 90 83.3
Aqoxy3G04250 Aquilegia oxysepala HOM05D003771 ORTHO05D004396 1.8e-34 149.4 90 83.3
AL3G44140 Arabidopsis lyrata HOM05D003771 ORTHO05D004396 1.8e-34 149.4 90 82.2
AT2G07360 Arabidopsis thaliana HOM05D003771 ORTHO05D004396 1.8e-34 149.4 90 82.2
arahy.Tifrunner.gnm1.ann1.TH49EC Arachis hypogaea HOM05D003771 ORTHO05D004396 1.8e-34 149.4 90 83.3
arahy.Tifrunner.gnm1.ann1.XKPK2Z Arachis hypogaea HOM05D003771 ORTHO05D004396 1.8e-34 149.4 90 83.3
Carub.0013s0005 Capsella rubella HOM05D003771 ORTHO05D004396 1.8e-34 149.4 90 82.2
GSVIVG01022289001 Vitis vinifera HOM05D003771 ORTHO05D004396 1.8e-34 149.4 90 82.2
Actinidia02465 Actinidia chinensis HOM05D003771 ORTHO05D004396 2.3e-34 149.1 90 82.2
BcaB01g04159 Brassica carinata HOM05D003771 ORTHO05D004396 2.3e-34 149.1 90 82.2
BcaC01g06134 Brassica carinata HOM05D003771 ORTHO05D004396 2.3e-34 149.1 90 82.2
A03p16060 Brassica napus HOM05D003771 ORTHO05D004396 2.3e-34 149.1 90 82.2
C03p18900 Brassica napus HOM05D003771 ORTHO05D004396 2.3e-34 149.1 90 82.2
BolC3t14282H Brassica oleracea HOM05D003771 ORTHO05D004396 2.3e-34 149.1 90 82.2
BraA03t10897Z Brassica rapa HOM05D003771 ORTHO05D004396 2.3e-34 149.1 90 82.2
Duzib168G1435 Durio zibethinus HOM05D003771 ORTHO05D004396 2.3e-34 149.1 90 83.3
Gohir.A05G000200 Gossypium hirsutum HOM05D003771 ORTHO05D004396 2.3e-34 149.1 90 83.3
Gohir.D05G000400 Gossypium hirsutum HOM05D003771 ORTHO05D004396 2.3e-34 149.1 90 83.3
Gorai.009G000200 Gossypium raimondii HOM05D003771 ORTHO05D004396 2.3e-34 149.1 90 83.3
Nn1g00173 Nelumbo nucifera HOM05D003771 ORTHO05D004396 2.3e-34 149.1 90 83.3
Nn3g19428 Nelumbo nucifera HOM05D003771 ORTHO05D004396 2.3e-34 149.1 90 84.4
THA.LOC104808936 Tarenaya hassleriana HOM05D003771 ORTHO05D004396 2.3e-34 149.1 90 82.2
CARHR104050 Cardamine hirsuta HOM05D003771 ORTHO05D004396 3.0e-34 148.7 90 81.1
SalBow5G2520 Salvia bowleyana HOM05D003771 ORTHO05D004396 3.0e-34 148.7 90 82.2
BcaC04g20648 Brassica carinata HOM05D003771 ORTHO05D004396 3.9e-34 148.3 90 82.2
A10p09550 Brassica napus HOM05D003771 ORTHO05D004396 3.9e-34 148.3 90 82.2
C09p41070 Brassica napus HOM05D003771 ORTHO05D004396 3.9e-34 148.3 90 82.2
Thhalv10012482m.g Eutrema salsugineum HOM05D003771 ORTHO05D004396 3.9e-34 148.3 90 81.1
HPP92_018040 Vanilla planifolia HOM05D003771 ORTHO05D004396 3.9e-34 148.3 90 84.4
Ah.04g162600 Amaranthus hybridus HOM05D003771 ORTHO05D004396 5.1e-34 147.9 90 82.2
Peaxi162Scf00322g01517 Petunia axillaris HOM05D003771 ORTHO05D004396 5.1e-34 147.9 90 82.2
Phvul.002G302000 Phaseolus vulgaris HOM05D003771 ORTHO05D004396 5.1e-34 147.9 90 82.2
PGR044G2258 Punica granatum HOM05D003771 ORTHO05D004396 5.1e-34 147.9 90 83.3
Sopen05g020060 Solanum pennellii HOM05D003771 ORTHO05D004396 5.1e-34 147.9 90 82.2
Lj5A798G49 Lonicera japonica HOM05D003771 ORTHO05D004396 6.7e-34 147.5 90 81.1
Manes.02G223900 Manihot esculenta HOM05D003771 ORTHO05D004396 6.7e-34 147.5 90 83.3
PSO063G0153 Papaver somniferum HOM05D003771 ORTHO05D004396 6.7e-34 147.5 88 81.8
ATR0626G390 Amborella trichopoda HOM05D003771 ORTHO05D004396 8.7e-34 147.1 90 82.2
BcaB08g35516 Brassica carinata HOM05D003771 ORTHO05D004396 8.7e-34 147.1 90 81.1
Cc06_g23760 Coffea canephora HOM05D003771 ORTHO05D004396 8.7e-34 147.1 90 82.2
Nitab4.5_0000019g0010 Nicotiana tabacum HOM05D003771 ORTHO05D004396 8.7e-34 147.1 90 82.2
Sc06g0002410 Simmondsia chinensis HOM05D003771 ORTHO05D004396 1.5e-33 146.4 90 80.0
Zm00001eb011800 Zea mays HOM05D003771 ORTHO05D004396 1.5e-33 146.4 90 82.2
Aa31sc328G10 Aethionema arabicum HOM05D003771 ORTHO05D004396 1.9e-33 146.0 90 80.0
EL10Ac4g08749 Beta vulgaris HOM05D003771 ORTHO05D004396 1.9e-33 146.0 90 81.1
AUR62034148 Chenopodium quinoa HOM05D003771 ORTHO05D004396 1.9e-33 146.0 90 81.1
Nitab4.5_0006114g0010 Nicotiana tabacum HOM05D003771 ORTHO05D004396 1.9e-33 146.0 90 81.1
unitig_899.g15422 Utricularia gibba HOM05D003771 ORTHO05D004396 1.9e-33 146.0 115 70.4
FAN17G2138 Fragaria x ananassa HOM05D003771 ORTHO05D004396 2.5e-33 145.6 90 81.1
Oeu008632.1 Olea europaea HOM05D003771 ORTHO05D004396 2.5e-33 145.6 90 81.1
RcHm_v2.0_Chr4g0384821 Rosa chinensis HOM05D003771 ORTHO05D004396 2.5e-33 145.6 90 81.1
TWI34G0561 Tripterygium wilfordii HOM05D003771 ORTHO05D004396 2.5e-33 145.6 87 82.8
Atru.chr12.1314 Acer truncatum HOM05D003771 ORTHO05D004396 3.3e-33 145.2 90 81.1
Ciclev10007279m.g Citrus clementina HOM05D003771 ORTHO05D004396 3.3e-33 145.2 90 81.1
HanXRQChr02g0040541 Helianthus annuus HOM05D003771 ORTHO05D004396 3.3e-33 145.2 87 82.8
Lalb_Chr05g0223831 Lupinus albus HOM05D003771 ORTHO05D004396 4.3e-33 144.8 90 80.0
MSTRG.26513 Avicennia marina HOM05D003771 ORTHO05D004396 5.6e-33 144.4 116 69.8
Cpa.g.sc91.64 Carica papaya HOM05D003771 ORTHO05D004396 5.6e-33 144.4 90 78.9
SEGI_40037 Sequoiadendron giganteum HOM05D003771 ORTHO05D004396 7.4e-33 144.1 90 81.1
AUR62014286 Chenopodium quinoa HOM05D003771 ORTHO05D004396 9.6e-33 143.7 90 80.0
Rhsim01G0106700 Rhododendron simsii HOM05D003771 ORTHO05D004396 9.6e-33 143.7 90 81.1
vmacro20748 Vaccinium macrocarpon HOM05D003771 ORTHO05D004396 9.6e-33 143.7 90 81.1
CAN.G587.52 Capsicum annuum HOM05D003771 ORTHO05D004396 1.3e-32 143.3 90 78.9
Hund03218 Selenicereus undatus HOM05D003771 ORTHO05D004396 1.3e-32 143.3 90 78.9
Os03g0265700 Oryza sativa ssp. japonica HOM05D003771 ORTHO05D004396 1.6e-32 142.9 90 80.0
ClCG04G000570 Citrullus lanatus HOM05D003771 ORTHO05D004396 2.1e-32 142.5 90 80.0
CsaV3_4G031470 Cucumis sativus L. HOM05D003771 ORTHO05D004396 2.1e-32 142.5 90 80.0
HanXRQChr05g0138111 Helianthus annuus HOM05D003771 ORTHO05D004396 2.1e-32 142.5 90 78.9
Sed0018603 Sechium edule HOM05D003771 ORTHO05D004396 2.1e-32 142.5 90 80.0
Lsat_1_v5_gn_1_6680 Lactuca sativa HOM05D003771 ORTHO05D004396 2.8e-32 142.1 87 81.6
MELO3C009070.2 Cucumis melo HOM05D003771 ORTHO05D004396 3.7e-32 141.7 90 80.0
ECA233G1083 Erigeron canadensis HOM05D003771 ORTHO05D004396 3.7e-32 141.7 87 80.5
PSO782G3876 Papaver somniferum HOM05D003771 ORTHO05D004396 3.7e-32 141.7 88 79.5
Lsat_1_v5_gn_8_69981 Lactuca sativa HOM05D003771 ORTHO05D004396 8.2e-32 140.6 90 77.8
Mapoly0015s0202 Marchantia polymorpha HOM05D003771 ORTHO05D004396 3.4e-30 135.2 115 66.1
Hund19352 Selenicereus undatus HOM05D003771 ORTHO05D004396 5.8e-30 134.4 90 74.4
SMO367G0435 Selaginella moellendorffii HOM05D003771 ORTHO05D004396 8.4e-29 130.6 89 73.0
Pp3c15_18470 Physcomitrium patens HOM05D003771 ORTHO05D004396 3.5e-27 125.2 77 79.2
AagrBONN_evm.TU.Sc2ySwM_228.2998 Anthoceros agrestis HOM05D003771 ORTHO05D004396 3.9e-26 121.7 86 67.4
AagrBONN_evm.TU.Sc2ySwM_228.3008 Anthoceros agrestis HOM05D003771 ORTHO05D004396 3.9e-26 121.7 86 67.4
AagrBONN_evm.TU.Sc2ySwM_369.331 Anthoceros agrestis HOM05D003771 ORTHO05D004396 3.9e-26 121.7 86 67.4
Zm00001eb307240 Zea mays HOM05D003771 ORTHO05D004396 3.3e-25 118.6 71 81.7
COL.COLO4_38524 Corchorus olitorius HOM05D003771 ORTHO05D004396 1.6e-24 116.3 90 66.7
Zm00001eb154330 Zea mays HOM05D003771 ORTHO05D004396 1.6e-24 116.3 71 80.3
Lsat_1_v5_gn_5_155680 Lactuca sativa HOM05D003771 ORTHO05D004396 5.9e-14 81.3 86 53.5
Psat0ss6263g0280 Pisum sativum HOM05D041104 ORTHO05D004396 1.1e-12 77.0 76 59.2
Psat3g071280 Pisum sativum HOM05D000062 ORTHO05D004396 3.2e-12 75.5 76 57.9
MD07G1055400 Malus domestica HOM05D003771 ORTHO05D004396 2.7e-11 72.4 40 87.5
Psat5g077000 Pisum sativum HOM05D000062 ORTHO05D004396 7.9e-11 70.9 76 53.9
Psat6g005640 Pisum sativum HOM05D003771 ORTHO05D004396 2.4e-07 59.3 31 87.1
CBR_g10825 Chara braunii HOM05D000019 ORTHO05D000048 1.2e-06 57.0 65 49.2
MD07G1055300 Malus domestica HOM05D003771 ORTHO05D004396 7.7e-06 54.3 31 83.9


User provided reference genes

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