Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s1551g0280 Pisum sativum HOM05D004145 ORTHO05D004879 4.1e-75 284.6 145 100.0
Ca_12868_v3 Cicer arietinum L. HOM05D004145 ORTHO05D004879 9.8e-69 263.5 142 95.8
Medtr7g115610 Medicago truncatula HOM05D004145 ORTHO05D004879 3.2e-67 258.5 140 95.7
VMungo0540G0740 Vigna mungo HOM05D004145 ORTHO05D004879 1.2e-66 256.5 140 92.9
Lj5g0001865 Lotus japonicus HOM05D004145 ORTHO05D004879 2.0e-66 255.8 140 92.9
Phvul.006G097200 Phaseolus vulgaris HOM05D004145 ORTHO05D004879 4.6e-66 254.6 140 92.1
Glyma.03G243100 Glycine max HOM05D004145 ORTHO05D004879 6.0e-66 254.2 140 91.4
Lalb_Chr15g0076981 Lupinus albus HOM05D004145 ORTHO05D004879 1.1e-64 250.0 140 89.3
MD00G1051200 Malus domestica HOM05D004145 ORTHO05D004879 1.6e-63 246.1 143 86.7
Glyma.19G240600 Glycine max HOM05D004145 ORTHO05D004879 3.6e-63 245.0 140 90.0
MD12G1232500 Malus domestica HOM05D004145 ORTHO05D004879 1.4e-62 243.0 143 85.3
TPR.G33341 Trifolium pratense HOM05D004145 ORTHO05D004879 3.1e-62 241.9 128 93.8
Prupe.6G335900 Prunus persica HOM05D004145 ORTHO05D004879 4.0e-62 241.5 143 86.0
PGR004G0092 Punica granatum HOM05D004145 ORTHO05D004879 8.9e-62 240.4 148 83.1
QL03p001164 Quercus lobata HOM05D004145 ORTHO05D004879 2.0e-61 239.2 143 83.9
CANSAT54G2505 Cannabis sativa HOM05D004145 ORTHO05D004879 3.4e-61 238.4 140 85.7
RcHm_v2.0_Chr6g0273391 Rosa chinensis HOM05D004145 ORTHO05D004879 4.4e-61 238.0 143 82.5
RcHm_v2.0_Chr2g0129391 Rosa chinensis HOM05D004145 ORTHO05D004879 5.8e-61 237.7 143 83.9
Manes.09G159400 Manihot esculenta HOM05D004145 ORTHO05D004879 1.3e-60 236.5 142 81.7
FAN15G1727 Fragaria x ananassa HOM05D004145 ORTHO05D004879 1.7e-60 236.1 143 83.2
FAN20G3151 Fragaria x ananassa HOM05D004145 ORTHO05D004879 1.7e-60 236.1 143 83.2
FAN27G3237 Fragaria x ananassa HOM05D004145 ORTHO05D004879 1.7e-60 236.1 143 83.2
Gohir.A13G101100 Gossypium hirsutum HOM05D004145 ORTHO05D004879 2.2e-60 235.7 141 85.8
Gohir.D13G104600 Gossypium hirsutum HOM05D004145 ORTHO05D004879 2.2e-60 235.7 141 85.8
arahy.Tifrunner.gnm1.ann1.Q65QWU Arachis hypogaea HOM05D004145 ORTHO05D004879 6.4e-60 234.2 144 84.0
Haze_04291 Corylus avellana HOM05D004145 ORTHO05D004879 8.3e-60 233.8 143 81.8
Gorai.013G117100 Gossypium raimondii HOM05D004145 ORTHO05D004879 8.3e-60 233.8 141 85.1
arahy.Tifrunner.gnm1.ann1.N9EJ2X Arachis hypogaea HOM05D004145 ORTHO05D004879 1.4e-59 233.0 146 82.2
Haze_14654 Corylus avellana HOM05D004145 ORTHO05D004879 1.4e-59 233.0 143 81.8
TWI12G1275 Tripterygium wilfordii HOM05D004145 ORTHO05D004879 1.4e-59 233.0 143 81.1
Atru.chr2.638 Acer truncatum HOM05D004145 ORTHO05D004879 2.4e-59 232.3 140 83.6
Cpa.g.sc117.30 Carica papaya HOM05D004145 ORTHO05D004879 2.4e-59 232.3 143 81.1
FvH4_2g12670 Fragaria vesca HOM05D004145 ORTHO05D004879 2.4e-59 232.3 143 81.1
TWI56G0710 Tripterygium wilfordii HOM05D004145 ORTHO05D004879 3.2e-59 231.9 140 82.1
MELO3C004345.2 Cucumis melo HOM05D004145 ORTHO05D004879 1.6e-58 229.6 140 80.7
ClCG07G016490 Citrullus lanatus HOM05D004145 ORTHO05D004879 2.1e-58 229.2 140 81.4
CsaV3_2G004470 Cucumis sativus L. HOM05D004145 ORTHO05D004879 3.5e-58 228.4 140 80.0
Ciclev10019027m.g Citrus clementina HOM05D004145 ORTHO05D004879 4.6e-58 228.0 146 80.8
Potri.005G045200 Populus trichocarpa HOM05D004145 ORTHO05D004879 1.3e-57 226.5 139 82.7
Thecc.05G254300 Theobroma cacao HOM05D004145 ORTHO05D004879 1.3e-57 226.5 141 82.3
COL.COLO4_36032 Corchorus olitorius HOM05D004145 ORTHO05D004879 1.7e-57 226.1 141 82.3
Eucgr.H04421 Eucalyptus grandis HOM05D004145 ORTHO05D004879 1.7e-57 226.1 143 78.3
Sed0004488 Sechium edule HOM05D004145 ORTHO05D004879 2.3e-57 225.7 142 79.6
TPR.G28883 Trifolium pratense HOM05D004145 ORTHO05D004879 8.6e-57 223.8 117 94.0
GSVIVG01026774001 Vitis vinifera HOM05D004145 ORTHO05D004879 4.3e-56 221.5 136 81.6
CSS0045127 Camellia sinensis var. sinensis HOM05D004145 ORTHO05D004879 1.2e-55 219.9 137 78.8
CDE05G0178 Ceratophyllum demersum HOM05D004145 ORTHO05D004879 1.6e-55 219.5 135 80.0
MBI12_g33070_MAGBIO Magnolia biondii HOM05D004145 ORTHO05D004879 1.6e-55 219.5 139 78.4
CSS0025723 Camellia sinensis var. sinensis HOM05D004145 ORTHO05D004879 3.6e-55 218.4 137 78.1
Hma1.2p1_1636F.1_g294830 Hydrangea macrophylla HOM05D004145 ORTHO05D004879 3.6e-55 218.4 137 81.0
SHI18260 Sapria himalayana HOM05D004145 ORTHO05D004879 3.6e-55 218.4 142 77.5
Nn2g12613 Nelumbo nucifera HOM05D004145 ORTHO05D004879 4.7e-55 218.0 136 79.4
Dinv09830 Davidia involucrata HOM05D004145 ORTHO05D004879 1.1e-54 216.9 137 81.0
EL10Ac4g09963 Beta vulgaris HOM05D004145 ORTHO05D004879 2.4e-54 215.7 136 77.2
Actinidia30923 Actinidia chinensis HOM05D004145 ORTHO05D004879 1.2e-53 213.4 140 76.4
Peaxi162Scf00225g00424 Petunia axillaris HOM05D004145 ORTHO05D004879 1.5e-53 213.0 137 75.9
CAN.G134.208 Capsicum annuum HOM05D004145 ORTHO05D004879 2.0e-53 212.6 146 74.0
PSO675G1731 Papaver somniferum HOM05D004145 ORTHO05D004879 2.0e-53 212.6 130 80.0
Sopen01g041760 Solanum pennellii HOM05D004145 ORTHO05D004879 2.0e-53 212.6 131 78.6
SGA_v2.0_scaffold80G25752 Striga asiatica HOM05D004145 ORTHO05D004879 2.0e-53 212.6 135 77.0
Solyc01g098180.3 Solanum lycopersicum HOM05D004145 ORTHO05D004879 2.6e-53 212.2 135 74.8
GSVIVG01032341001 Vitis vinifera HOM05D004145 ORTHO05D004879 4.4e-53 211.5 136 77.9
Lsat_1_v5_gn_6_96941 Lactuca sativa HOM05D004145 ORTHO05D004879 5.8e-53 211.1 141 75.9
Oeu028497.4 Olea europaea HOM05D004145 ORTHO05D004879 5.8e-53 211.1 138 74.6
GSVIVG01032295001 Vitis vinifera HOM05D004145 ORTHO05D004879 5.8e-53 211.1 131 79.4
THA.LOC104805832 Tarenaya hassleriana HOM05D004145 ORTHO05D004879 7.6e-53 210.7 143 76.2
MSTRG.2685 Avicennia marina HOM05D004145 ORTHO05D004879 9.9e-53 210.3 141 74.5
AUR62006653 Chenopodium quinoa HOM05D004145 ORTHO05D004879 9.9e-53 210.3 136 74.3
Sc16g0010400 Simmondsia chinensis HOM05D004145 ORTHO05D004879 9.9e-53 210.3 136 77.2
Cc02_g32210 Coffea canephora HOM05D004145 ORTHO05D004879 1.3e-52 209.9 125 82.4
FAN24G1676 Fragaria x ananassa HOM05D004145 ORTHO05D004879 2.2e-52 209.1 130 78.5
PSO017G5505 Papaver somniferum HOM05D004145 ORTHO05D004879 2.2e-52 209.1 130 78.5
Aqoxy2G04020 Aquilegia oxysepala HOM05D004145 ORTHO05D004879 8.4e-52 207.2 138 77.5
BolC4t22972H Brassica oleracea HOM05D004145 ORTHO05D004879 8.4e-52 207.2 147 73.5
AUR62000308 Chenopodium quinoa HOM05D004145 ORTHO05D004879 1.1e-51 206.8 136 72.8
Migut.H01121 Erythranthe guttata HOM05D004145 ORTHO05D004879 1.1e-51 206.8 125 80.0
Ah.06g195470 Amaranthus hybridus HOM05D004145 ORTHO05D004879 3.2e-51 205.3 136 73.5
Nitab4.5_0010351g0020 Nicotiana tabacum HOM05D004145 ORTHO05D004879 3.2e-51 205.3 125 79.2
RcHm_v2.0_Chr4g0430791 Rosa chinensis HOM05D004145 ORTHO05D004879 4.1e-51 204.9 151 72.8
Nitab4.5_0000245g0100 Nicotiana tabacum HOM05D004145 ORTHO05D004879 5.4e-51 204.5 125 78.4
Aa31sc654G10 Aethionema arabicum HOM05D004145 ORTHO05D004879 7.1e-51 204.1 147 72.8
Sp4g17260 Schrenkiella parvula HOM05D004145 ORTHO05D004879 7.1e-51 204.1 147 70.7
BcaC02g11578 Brassica carinata HOM05D004145 ORTHO05D004879 9.2e-51 203.8 147 71.4
A05p10730 Brassica napus HOM05D004145 ORTHO05D004879 9.2e-51 203.8 147 71.4
C04p13820 Brassica napus HOM05D004145 ORTHO05D004879 9.2e-51 203.8 147 71.4
BraA05t20017Z Brassica rapa HOM05D004145 ORTHO05D004879 9.2e-51 203.8 147 71.4
BcaB02g09494 Brassica carinata HOM05D004145 ORTHO05D004879 1.2e-50 203.4 147 71.4
ECA246G2136 Erigeron canadensis HOM05D004145 ORTHO05D004879 1.2e-50 203.4 140 70.7
vmacro06192 Vaccinium macrocarpon HOM05D004145 ORTHO05D004879 1.2e-50 203.4 157 67.5
AT2G34970 Arabidopsis thaliana HOM05D004145 ORTHO05D004879 1.3e-49 199.9 149 71.1
AL4G30980 Arabidopsis lyrata HOM05D004145 ORTHO05D004879 1.7e-49 199.5 148 71.6
Carub.0004s1666 Capsella rubella HOM05D004145 ORTHO05D004879 5.1e-49 198.0 148 70.3
HanXRQChr15g0469811 Helianthus annuus HOM05D004145 ORTHO05D004879 1.9e-48 196.1 140 70.7
Dinv01337 Davidia involucrata HOM05D004145 ORTHO05D004879 3.3e-48 195.3 120 81.7
BcaB06g28816 Brassica carinata HOM05D004145 ORTHO05D004879 1.2e-47 193.4 147 70.7
CARHR129130 Cardamine hirsuta HOM05D004145 ORTHO05D004879 1.2e-47 193.4 150 68.7
DCAR_006415 Daucus carota HOM05D004145 ORTHO05D004879 1.2e-47 193.4 160 64.4
Thhalv10016297m.g Eutrema salsugineum HOM05D004145 ORTHO05D004879 1.2e-47 193.4 139 71.2
Mapoly0056s0115 Marchantia polymorpha HOM05D004145 ORTHO05D004879 4.7e-47 191.4 135 72.6
unitig_748.g8566 Utricularia gibba HOM05D004145 ORTHO05D004879 6.2e-47 191.0 134 72.4
ATR0564G152 Amborella trichopoda HOM05D004145 ORTHO05D004879 8.1e-47 190.7 133 72.9
AL7G36090 Arabidopsis lyrata HOM05D004145 ORTHO05D004879 1.1e-46 190.3 150 67.3
AT4G18300 Arabidopsis thaliana HOM05D004145 ORTHO05D004879 1.1e-46 190.3 150 67.3
FAN17G0778 Fragaria x ananassa HOM05D004145 ORTHO05D004879 1.1e-46 190.3 144 69.4
FvH4_4g24061 Fragaria vesca HOM05D004145 ORTHO05D004879 1.4e-46 189.9 144 69.4
Pp3c1_20030 Physcomitrium patens HOM05D004145 ORTHO05D004879 1.4e-46 189.9 136 69.9
AagrBONN_evm.TU.Sc2ySwM_228.295 Anthoceros agrestis HOM05D004145 ORTHO05D004879 2.0e-45 186.0 135 68.1
Hund07348 Selenicereus undatus HOM05D004145 ORTHO05D004879 2.9e-44 182.2 145 65.5
Os02g0812400 Oryza sativa ssp. japonica HOM05D004145 ORTHO05D004879 3.8e-44 181.8 131 70.2
Carub.0007s2297 Capsella rubella HOM05D004145 ORTHO05D004879 1.1e-43 180.3 146 65.1
Zm00001eb258570 Zea mays HOM05D004145 ORTHO05D004879 2.4e-43 179.1 132 69.7
SMO356G0330 Selaginella moellendorffii HOM05D004145 ORTHO05D004879 5.4e-43 177.9 144 64.6
PRCOL_00001177 Prasinoderma coloniale HOM05D004145 ORTHO05D004879 1.6e-39 166.4 128 62.5
AT3G02270 Arabidopsis thaliana HOM05D004145 ORTHO05D004879 2.1e-39 166.0 150 62.7
MCO16G505 Micromonas commoda HOM05D004145 ORTHO05D004879 3.1e-38 162.2 124 64.5
PSO541G4045 Papaver somniferum HOM05D004145 ORTHO05D004879 9.0e-38 160.6 137 59.1
Lsat_1_v5_gn_3_33301 Lactuca sativa HOM05D004145 ORTHO05D004879 1.7e-36 156.4 122 66.4
Haze_00048 Corylus avellana HOM05D000222 ORTHO05D004879 2.9e-36 155.6 98 77.6
PSO675G6749 Papaver somniferum HOM05D004145 ORTHO05D004879 4.9e-36 154.8 137 56.9
HPP92_016926 Vanilla planifolia HOM05D004145 ORTHO05D004879 2.7e-34 149.1 100 74.0
ECA246G4181 Erigeron canadensis HOM05D004145 ORTHO05D004879 7.9e-34 147.5 143 53.8
AL3G11540 Arabidopsis lyrata HOM05D004145 ORTHO05D004879 1.3e-33 146.7 130 64.6
Lj9A674T60 Lonicera japonica HOM05D004145 ORTHO05D004879 1.8e-33 146.4 125 63.2
Dinv04277 Davidia involucrata HOM05D004145 ORTHO05D004879 3.9e-33 145.2 86 81.4
TPR.G33351 Trifolium pratense HOM05D004145 ORTHO05D004879 4.3e-32 141.7 73 91.8
Cre12.g502200 Chlamydomonas reinhardtii HOM05D004145 ORTHO05D004879 5.6e-32 141.4 124 58.9
HPP92_016860 Vanilla planifolia HOM05D004145 ORTHO05D004879 9.6e-32 140.6 99 72.7
Sabra16G0314500 Salix brachista HOM05D004145 ORTHO05D004879 4.0e-30 135.2 76 85.5
Sabra16G0314400 Salix brachista HOM05D004145 ORTHO05D004879 5.3e-30 134.8 85 76.5
FAN07G1263 Fragaria x ananassa HOM05D000016 ORTHO05D004879 5.8e-29 131.3 109 65.1
PSO339G4752 Papaver somniferum HOM05D004145 ORTHO05D004879 9.9e-29 130.6 156 51.3
Rhsim03G0245100 Rhododendron simsii HOM05D004145 ORTHO05D004879 3.2e-27 125.6 109 60.6
BcaB02g09493 Brassica carinata HOM05D004145 ORTHO05D004879 5.5e-27 124.8 93 66.7
CBR_g23483 Chara braunii HOM05D004145 ORTHO05D004879 2.1e-26 122.9 174 40.2
TPR.G20882 Trifolium pratense HOM05D004145 ORTHO05D004879 3.9e-25 118.6 63 92.1
Medtr6g023790 Medicago truncatula HOM05D004145 ORTHO05D004879 8.5e-12 74.3 67 61.2
EL10Ac3g07149 Beta vulgaris HOM05D004145 ORTHO05D004879 1.3e-07 60.5 44 65.9
unitig_27.g25069 Utricularia gibba HOM05D002357 ORTHO05D002676 1.4e-06 57.0 123 28.5
C03p26380 Brassica napus HOM05D002357 ORTHO05D002676 2.4e-06 56.2 142 25.4
BcaC02g12111 Brassica carinata HOM05D002357 ORTHO05D002676 6.9e-06 54.7 116 27.6


User provided reference genes

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