Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s1478g0200 Pisum sativum HOM05D002090 ORTHO05D001923 1.1e-118 429.9 206 100.0
Psat5g054720 Pisum sativum HOM05D002090 ORTHO05D001923 7.7e-43 177.9 206 43.7
Psat5g061840 Pisum sativum HOM05D002090 ORTHO05D001923 1.8e-39 166.8 208 41.3
Psat1g078880 Pisum sativum HOM05D002090 ORTHO05D001923 4.2e-33 145.6 153 45.8
Psat4g042560 Pisum sativum HOM05D002090 ORTHO05D001923 4.9e-29 132.1 179 37.4
Psat3g162360 Pisum sativum HOM05D002090 ORTHO05D001923 1.7e-26 123.6 97 61.9
Psat4g071480 Pisum sativum HOM05D002090 ORTHO05D001923 2.3e-23 113.2 166 37.3
TPR.G15265 Trifolium pratense HOM05D002090 ORTHO05D001923 3.0e-23 112.8 214 31.8
Medtr6g464080 Medicago truncatula HOM05D002090 ORTHO05D001923 6.8e-23 111.7 206 35.0
TPR.G26860 Trifolium pratense HOM05D002090 ORTHO05D001923 5.8e-22 108.6 214 31.3
TPR.G15173 Trifolium pratense HOM05D002090 ORTHO05D001923 7.5e-22 108.2 204 33.3
Psat6g105800 Pisum sativum HOM05D002090 ORTHO05D001923 2.2e-21 106.7 97 51.5
Psat1g093760 Pisum sativum HOM05D002090 ORTHO05D001923 3.7e-21 105.9 166 34.3
Psat1g120640 Pisum sativum HOM05D002090 ORTHO05D015180 1.1e-20 104.4 165 37.6
Medtr8g076570 Medicago truncatula HOM05D002790 ORTHO05D003033 3.2e-20 102.8 206 33.5
Lalb_Chr13g0293801 Lupinus albus HOM05D002090 ORTHO05D001923 9.5e-17 91.3 203 29.1
Lalb_Chr11g0063921 Lupinus albus HOM05D002090 ORTHO05D001923 4.0e-15 85.9 202 26.7
Lalb_Chr15g0080831 Lupinus albus HOM05D002090 ORTHO05D001923 4.0e-15 85.9 202 26.7
Lalb_Chr24g0395611 Lupinus albus HOM05D002090 ORTHO05D001923 4.0e-15 85.9 202 26.7
Lalb_Chr25g0279801 Lupinus albus HOM05D002090 ORTHO05D001923 4.0e-15 85.9 202 26.7
Lalb_Chr25g0284421 Lupinus albus HOM05D002090 ORTHO05D001923 4.0e-15 85.9 202 26.7
Lalb_Chr11g0064711 Lupinus albus HOM05D002090 ORTHO05D001923 5.2e-15 85.5 202 26.7
Lalb_Chr12g0196331 Lupinus albus HOM05D002090 ORTHO05D001923 6.8e-15 85.1 202 26.2
Lalb_Chr16g0381501 Lupinus albus HOM05D002090 ORTHO05D001923 6.8e-15 85.1 202 26.2
Lalb_Chr20g0117751 Lupinus albus HOM05D002090 ORTHO05D001923 6.8e-15 85.1 202 26.2
Lalb_Chr23g0269621 Lupinus albus HOM05D002090 ORTHO05D001923 6.8e-15 85.1 202 26.2
Lalb_Chr03g0030491 Lupinus albus HOM05D002090 ORTHO05D001923 8.9e-15 84.7 202 26.7
Lalb_Chr07g0195661 Lupinus albus HOM05D002090 ORTHO05D001923 1.2e-14 84.3 202 27.2
Lalb_Chr01g0020731 Lupinus albus HOM05D002090 ORTHO05D001923 1.5e-14 84.0 202 26.2
Lalb_Chr10g0095211 Lupinus albus HOM05D002090 ORTHO05D001923 1.5e-14 84.0 202 26.2
Lalb_Chr14g0376091 Lupinus albus HOM05D002090 ORTHO05D001923 1.5e-14 84.0 202 26.2
Glyma.03G083300 Glycine max HOM05D002090 ORTHO05D001923 2.0e-14 83.6 205 28.3
VMungo0540G0980 Vigna mungo HOM05D002090 ORTHO05D001923 3.4e-14 82.8 180 28.9
Medtr5g053590 Medicago truncatula HOM05D002090 ORTHO05D001923 4.4e-14 82.4 215 25.6
Medtr4g014890 Medicago truncatula HOM05D002090 ORTHO05D001923 4.9e-13 79.0 198 24.7
TPR.G31936 Trifolium pratense HOM05D002090 ORTHO05D001923 4.9e-13 79.0 196 26.5
Medtr3g055660 Medicago truncatula HOM05D002090 ORTHO05D001923 8.3e-13 78.2 198 24.7
Lalb_Chr10g0095221 Lupinus albus HOM05D002090 ORTHO05D001923 2.4e-12 76.6 135 28.1
Psat3g137520 Pisum sativum HOM05D002090 ORTHO05D001923 2.4e-12 76.6 90 40.0
Lalb_Chr06g0171211 Lupinus albus HOM05D002090 ORTHO05D001923 3.2e-12 76.3 146 29.5
Psat5g183760 Pisum sativum HOM05D015378 ORTHO05D015180 3.2e-12 76.3 78 43.6
Medtr1g092930 Medicago truncatula HOM05D000096 ORTHO05D000045 9.2e-12 74.7 126 27.8
Psat1g115320 Pisum sativum HOM05D002090 ORTHO05D001923 9.2e-12 74.7 116 33.6
Lalb_Chr02g0152971 Lupinus albus HOM05D002090 ORTHO05D001923 2.0e-11 73.6 131 28.2
TPR.G13259 Trifolium pratense HOM05D002090 ORTHO05D001923 2.0e-11 73.6 170 24.7
Lalb_Chr09g0332281 Lupinus albus HOM05D002090 ORTHO05D001923 2.7e-11 73.2 124 29.8
Lalb_Chr04g0253881 Lupinus albus HOM05D002090 ORTHO05D001923 3.5e-11 72.8 131 28.2
Lalb_Chr04g0258381 Lupinus albus HOM05D002090 ORTHO05D001923 6.0e-11 72.0 129 27.9
arahy.Tifrunner.gnm1.ann1.7R55CH Arachis hypogaea HOM05D008664 ORTHO05D000174 1.0e-10 71.2 185 28.1
arahy.Tifrunner.gnm1.ann1.AJVM0N Arachis hypogaea HOM05D008664 ORTHO05D000174 1.0e-10 71.2 185 28.1
arahy.Tifrunner.gnm1.ann1.7L6ESV Arachis hypogaea HOM05D008664 ORTHO05D000174 1.3e-10 70.9 185 28.1
Lalb_Chr02g0157101 Lupinus albus HOM05D002090 ORTHO05D001923 1.7e-10 70.5 126 28.6
Lalb_Chr09g0334041 Lupinus albus HOM05D002090 ORTHO05D001923 1.7e-10 70.5 126 28.6
Glyma.20G053800 Glycine max HOM05D002090 ORTHO05D001923 3.0e-10 69.7 201 23.9
Lalb_Chr11g0071391 Lupinus albus HOM05D002090 ORTHO05D001923 3.0e-10 69.7 129 27.9
TPR.G2805 Trifolium pratense HOM05D002090 ORTHO05D001923 3.0e-10 69.7 177 27.7
TPR.G34836 Trifolium pratense HOM05D000096 ORTHO05D000045 3.0e-10 69.7 200 24.5
Lalb_Chr07g0192401 Lupinus albus HOM05D002090 ORTHO05D001923 3.9e-10 69.3 130 28.5
Lalb_Chr25g0281591 Lupinus albus HOM05D002090 ORTHO05D001923 8.6e-10 68.2 257 23.3
Medtr1g092990 Medicago truncatula HOM05D000096 ORTHO05D000045 1.1e-09 67.8 109 28.4
arahy.Tifrunner.gnm1.ann1.VX4W4R Arachis hypogaea HOM05D008664 ORTHO05D000174 1.5e-09 67.4 185 27.6
Lalb_Chr09g0332941 Lupinus albus HOM05D002090 ORTHO05D001923 1.5e-09 67.4 125 27.2
Medtr1g011320 Medicago truncatula HOM05D002090 ORTHO05D001923 1.5e-09 67.4 144 31.9
Psat1g107760 Pisum sativum HOM05D002090 ORTHO05D015180 1.5e-09 67.4 70 50.0
Psat1g017400 Pisum sativum HOM05D002090 ORTHO05D001923 1.9e-09 67.0 47 63.8
Lalb_Chr20g0113671 Lupinus albus HOM05D002090 ORTHO05D001923 5.6e-09 65.5 127 26.8
arahy.Tifrunner.gnm1.ann1.0VM956 Arachis hypogaea HOM05D008664 ORTHO05D000174 9.5e-09 64.7 185 27.0
Lalb_Chr21g0316651 Lupinus albus HOM05D002090 ORTHO05D001923 9.5e-09 64.7 121 28.1
Lalb_Chr09g0332121 Lupinus albus HOM05D002090 ORTHO05D001923 1.2e-08 64.3 130 28.5
Lalb_Chr02g0157151 Lupinus albus HOM05D002090 ORTHO05D001923 2.8e-08 63.2 121 27.3
Medtr8g077490 Medicago truncatula HOM05D002090 ORTHO05D001923 2.8e-08 63.2 126 27.0
Ca_15804_v3 Cicer arietinum L. HOM05D002090 ORTHO05D001923 6.2e-08 62.0 105 33.3
Medtr2g055290 Medicago truncatula HOM05D002090 ORTHO05D001923 8.1e-08 61.6 199 24.6
TPR.G15973 Trifolium pratense HOM05D001685 ORTHO05D007488 1.1e-07 61.2 163 30.1
Lalb_Chr11g0070891 Lupinus albus HOM05D002090 ORTHO05D001923 2.3e-07 60.1 129 25.6
Lalb_Chr20g0108911 Lupinus albus HOM05D002090 ORTHO05D001923 6.8e-07 58.5 92 32.6
Lalb_Chr24g0402901 Lupinus albus HOM05D002090 ORTHO05D001923 1.2e-06 57.8 119 27.7
Lalb_Chr11g0072591 Lupinus albus HOM05D002090 ORTHO05D001923 1.5e-06 57.4 156 25.0
Psat6g155560 Pisum sativum HOM05D002090 ORTHO05D001923 1.5e-06 57.4 65 41.5
Psat6g209680 Pisum sativum HOM05D002090 ORTHO05D001923 1.5e-06 57.4 60 43.3
Medtr6g055250 Medicago truncatula HOM05D002090 ORTHO05D001923 2.0e-06 57.0 165 24.2
Glyma.03G068701 Glycine max HOM05D002090 ORTHO05D001923 2.6e-06 56.6 136 27.9
Medtr1g011490 Medicago truncatula HOM05D008036 ORTHO05D000174 3.4e-06 56.2 175 21.7
Medtr1g082860 Medicago truncatula HOM05D008036 ORTHO05D000174 3.4e-06 56.2 175 21.7
Glyma.16G086766 Glycine max HOM05D002090 ORTHO05D001923 7.5e-06 55.1 121 28.9


User provided reference genes

Program Settings