Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s1353g0040 Pisum sativum HOM05D012055 ORTHO05D014183 9.4e-86 320.1 154 100.0
Psat1g009360 Pisum sativum HOM05D012055 ORTHO05D014183 4.2e-70 268.1 155 87.7
Medtr2g071760 Medicago truncatula HOM05D012055 ORTHO05D014183 7.2e-62 240.7 158 80.4
Medtr2g071790 Medicago truncatula HOM05D012055 ORTHO05D014183 1.5e-59 233.0 158 77.8
Medtr2g071750 Medicago truncatula HOM05D012055 ORTHO05D014183 2.0e-59 232.6 158 76.6
TPR.G26651 Trifolium pratense HOM05D012055 ORTHO05D014183 4.1e-57 224.9 160 75.0
TPR.G26637 Trifolium pratense HOM05D012055 ORTHO05D014183 7.0e-57 224.2 158 74.1
Ca_03397_v3 Cicer arietinum L. HOM05D012055 ORTHO05D014183 4.6e-56 221.5 162 73.5
Medtr2g071740 Medicago truncatula HOM05D012055 ORTHO05D014183 1.3e-55 219.9 151 78.1
Glyma.13G260000 Glycine max HOM05D012055 ORTHO05D014183 6.8e-28 127.9 167 49.7
Glyma.15G248000 Glycine max HOM05D012055 ORTHO05D014183 1.2e-27 127.1 166 49.4
Lj3g0014819 Lotus japonicus HOM05D012055 ORTHO05D014183 7.6e-27 124.4 164 48.2
Phvul.005G061600 Phaseolus vulgaris HOM05D012055 ORTHO05D014183 1.7e-26 123.2 161 49.1
VMungo1080G1331 Vigna mungo HOM05D012055 ORTHO05D014183 1.1e-20 104.0 156 48.1
Lalb_Chr25g0285461 Lupinus albus HOM05D012055 ORTHO05D014183 4.0e-12 75.5 121 46.3
Actinidia35170 Actinidia chinensis HOM05D008142 ORTHO05D009674 1.4e-09 67.0 148 35.1
Nn3g20734 Nelumbo nucifera HOM05D008142 ORTHO05D009674 1.9e-09 66.6 155 36.8
Eucgr.F03213 Eucalyptus grandis HOM05D008142 ORTHO05D009674 5.5e-09 65.1 154 33.8
Nn4g26546 Nelumbo nucifera HOM05D008142 ORTHO05D009674 5.5e-09 65.1 159 33.3
Thecc.07G144400 Theobroma cacao HOM05D008142 ORTHO05D009674 3.5e-08 62.4 138 32.6
Dinv13326 Davidia involucrata HOM05D000230 ORTHO05D000176 4.6e-08 62.0 137 38.7
Dinv26679 Davidia involucrata HOM05D008142 ORTHO05D009674 6.0e-08 61.6 118 39.8
Hma1.2p1_0280F.1_g112890 Hydrangea macrophylla HOM05D008142 ORTHO05D009674 6.0e-08 61.6 158 32.3
QL04p069987 Quercus lobata HOM05D008142 ORTHO05D009674 6.0e-08 61.6 143 33.6
Glyma.15G247800 Glycine max HOM05D010689 ORTHO05D012855 1.0e-07 60.8 150 35.3
QL04p069966 Quercus lobata HOM05D008142 ORTHO05D009674 8.7e-07 57.8 143 32.9
TAR629G2490 Trochodendron aralioides HOM05D008142 ORTHO05D009674 8.7e-07 57.8 166 30.1
Oeu001311.1 Olea europaea HOM05D008142 ORTHO05D009674 3.3e-06 55.8 146 31.5
Glyma.15G247900 Glycine max HOM05D010689 ORTHO05D012855 5.6e-06 55.1 150 33.3
RcHm_v2.0_Chr5g0028181 Rosa chinensis HOM05D008142 ORTHO05D009674 5.6e-06 55.1 144 33.3
ECA236G2480 Erigeron canadensis HOM05D002418 ORTHO05D002572 7.4e-06 54.7 134 34.3
FvH4_3g16940 Fragaria vesca HOM05D008142 ORTHO05D009674 7.4e-06 54.7 153 30.1
FAN11G1471 Fragaria x ananassa HOM05D008142 ORTHO05D009674 7.4e-06 54.7 153 30.1
FAN16G2943 Fragaria x ananassa HOM05D008142 ORTHO05D009674 9.6e-06 54.3 153 30.1


User provided reference genes

Program Settings