Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat0s1330g0240 Pisum sativum HOM05D004473 ORTHO05D005652 1.1e-124 449.9 221 100.0
Medtr3g035685 Medicago truncatula HOM05D004473 ORTHO05D005652 5.0e-88 328.2 191 86.9
Medtr4g051280 Medicago truncatula HOM05D004473 ORTHO05D005652 5.0e-88 328.2 191 86.9
Medtr7g021760 Medicago truncatula HOM05D004473 ORTHO05D005652 2.5e-87 325.9 191 86.9
PGR111G0117 Punica granatum HOM05D004473 ORTHO05D005652 4.5e-65 251.9 214 63.6
ScUNg0001290 Simmondsia chinensis HOM05D004473 ORTHO05D005652 5.5e-63 245.0 204 63.7
RcHm_v2.0_CPg0502521 Rosa chinensis HOM05D004473 ORTHO05D005652 4.7e-62 241.9 191 67.0
LjContig00318g0021272 Lotus japonicus HOM05D004473 ORTHO05D005652 4.0e-61 238.8 179 72.1
Hma1.2p1_4210F.1_g338470 Hydrangea macrophylla HOM05D004473 ORTHO05D005652 2.6e-60 236.1 204 62.3
Eucgr.D01147 Eucalyptus grandis HOM05D004473 ORTHO05D005652 7.5e-60 234.6 214 62.1
Potri.013G138201 Populus trichocarpa HOM05D004473 ORTHO05D005652 9.7e-60 234.2 192 67.7
Lalb_Chr07g0191541 Lupinus albus HOM05D004473 ORTHO05D005652 5.3e-58 228.4 163 75.5
Solyc00g500048.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 5.9e-57 224.9 211 60.7
Solyc00g500131.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 5.9e-57 224.9 211 60.7
Solyc00g500201.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 5.9e-57 224.9 211 60.7
Solyc00g500295.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 5.9e-57 224.9 211 60.7
Solyc00g500330.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 5.9e-57 224.9 211 60.7
Sopen01g008040 Solanum pennellii HOM05D004473 ORTHO05D005652 5.9e-57 224.9 211 60.7
CAN.G939.10 Capsicum annuum HOM05D004473 ORTHO05D005652 1.7e-56 223.4 212 59.9
Gohir.A04G039120 Gossypium hirsutum HOM05D004473 ORTHO05D005652 3.8e-56 222.2 216 59.7
Gohir.A04G039150 Gossypium hirsutum HOM05D004473 ORTHO05D005652 3.8e-56 222.2 216 59.7
Lj2P1239T154 Lonicera japonica HOM05D004473 ORTHO05D005652 8.5e-56 221.1 204 60.3
Hund10282 Selenicereus undatus HOM05D004473 ORTHO05D005652 8.5e-56 221.1 195 64.6
Hund27810 Selenicereus undatus HOM05D004473 ORTHO05D005652 8.5e-56 221.1 195 64.6
Hund28272 Selenicereus undatus HOM05D004473 ORTHO05D005652 8.5e-56 221.1 195 64.6
Hund29400 Selenicereus undatus HOM05D004473 ORTHO05D005652 8.5e-56 221.1 195 64.6
Hund30056 Selenicereus undatus HOM05D004473 ORTHO05D005652 8.5e-56 221.1 195 64.6
EL10As2g23210 Beta vulgaris HOM05D004473 ORTHO05D005652 1.2e-54 217.2 210 59.0
LjContig00489g0020099 Lotus japonicus HOM05D004473 ORTHO05D005652 6.1e-54 214.9 197 60.9
Hund29659 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.0e-53 214.2 193 63.2
DCAR_032465 Daucus carota HOM05D004473 ORTHO05D005652 5.2e-53 211.8 211 57.8
arahy.Tifrunner.gnm1.ann1.40BINF Arachis hypogaea HOM05D004473 ORTHO05D005652 1.2e-52 210.7 184 64.7
Hund29405 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.2e-52 210.7 188 64.4
Sed0024057 Sechium edule HOM05D004473 ORTHO05D005652 2.0e-52 209.9 189 59.8
HanXRQChr00c0368g0574161 Helianthus annuus HOM05D004473 ORTHO05D005652 1.3e-51 207.2 192 58.3
HanXRQChr11g0326581 Helianthus annuus HOM05D004473 ORTHO05D005652 1.3e-51 207.2 192 58.3
HanXRQCPg0579741 Helianthus annuus HOM05D004473 ORTHO05D005652 1.3e-51 207.2 192 58.3
SalBow1G8010 Salvia bowleyana HOM05D004473 ORTHO05D005652 1.3e-51 207.2 208 56.2
HanXRQChr00c0125g0571751 Helianthus annuus HOM05D004473 ORTHO05D005652 8.3e-51 204.5 176 61.4
Atru.chr6.757 Acer truncatum HOM05D004473 ORTHO05D005652 1.4e-50 203.8 210 56.2
Gohir.1Z049403 Gossypium hirsutum HOM05D004473 ORTHO05D005652 3.8e-48 195.7 216 55.1
ATCG00040 Arabidopsis thaliana HOM05D004473 ORTHO05D005652 1.9e-47 193.4 197 56.3
C06p21390 Brassica napus HOM05D004473 ORTHO05D005652 1.2e-46 190.7 195 56.4
BraSC143t45676Z Brassica rapa HOM05D004473 ORTHO05D005652 1.2e-46 190.7 195 56.4
BraSC151t45687Z Brassica rapa HOM05D004473 ORTHO05D005652 1.2e-46 190.7 195 56.4
BraSC25t45889Z Brassica rapa HOM05D004473 ORTHO05D005652 1.2e-46 190.7 195 56.4
BcaC05g28805 Brassica carinata HOM05D004473 ORTHO05D005652 2.7e-46 189.5 195 56.9
Hund30352 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.7e-46 189.5 193 58.0
PSO548G0076 Papaver somniferum HOM05D004473 ORTHO05D005652 6.1e-46 188.3 199 55.3
Peaxi162Scf00211g00244 Petunia axillaris HOM05D004473 ORTHO05D005652 3.4e-44 182.6 167 60.5
Hund11181 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.8e-43 179.5 191 53.9
Sed0017792 Sechium edule HOM05D004473 ORTHO05D005652 8.3e-43 177.9 194 53.6
Medtr0002s0390 Medicago truncatula HOM05D004473 ORTHO05D005652 5.4e-42 175.3 196 53.6
CAN.G386.22 Capsicum annuum HOM05D004473 ORTHO05D005652 1.2e-41 174.1 154 61.7
Medtr7g117940 Medicago truncatula HOM05D004473 ORTHO05D005652 5.9e-41 171.8 104 83.7
arahy.Tifrunner.gnm1.ann1.EJ7WQI Arachis hypogaea HOM05D004473 ORTHO05D005652 7.7e-41 171.4 129 70.5
Eucgr.D00924 Eucalyptus grandis HOM05D004473 ORTHO05D005652 1.1e-39 167.5 167 57.5
Hund29000 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.9e-39 166.8 193 54.4
Hund29926 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.9e-39 166.8 193 54.4
Oeu012780.1 Olea europaea HOM05D001387 ORTHO05D001250 5.6e-39 165.2 126 65.9
Hund10683 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.6e-38 163.7 193 52.8
GSVIVG01022885001 Vitis vinifera HOM05D004473 ORTHO05D005652 1.4e-37 160.6 125 65.6
TWI34G1450 Tripterygium wilfordii HOM05D004473 ORTHO05D005652 1.2e-36 157.5 128 64.1
Solyc09g061390.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 8.3e-35 151.4 118 68.6
Lsat_1_v5_gn_7_76981 Lactuca sativa HOM05D004473 ORTHO05D005652 4.1e-34 149.1 131 58.8
SGA_v2.0_scaffold479G52250 Striga asiatica HOM05D004473 ORTHO05D005652 9.2e-34 147.9 215 46.0
Gohir.1Z050066 Gossypium hirsutum HOM05D004473 ORTHO05D005652 2.5e-31 139.8 216 44.9
HanXRQChr16g0503961 Helianthus annuus HOM05D004473 ORTHO05D005652 4.4e-28 129.0 117 59.8
BcaB03g16404 Brassica carinata HOM05D004473 ORTHO05D005652 2.2e-27 126.7 127 55.9
Peaxi162Scf00219g00049 Petunia axillaris HOM05D004473 ORTHO05D005652 1.3e-24 117.5 96 63.5
Nn1g08463 Nelumbo nucifera HOM05D004473 ORTHO05D005652 3.0e-24 116.3 107 60.7
Gohir.A08G070362 Gossypium hirsutum HOM05D004473 ORTHO05D005652 1.5e-23 114.0 123 54.5
Nitab4.5_0001439g0120 Nicotiana tabacum HOM05D004473 ORTHO05D005652 1.5e-23 114.0 107 59.8
Gorai.001G044100 Gossypium raimondii HOM05D004473 ORTHO05D005652 1.9e-23 113.6 99 61.6
Hund25918 Selenicereus undatus HOM05D004473 ORTHO05D005652 3.3e-23 112.8 92 68.5
BraSC59t46519Z Brassica rapa HOM05D004473 ORTHO05D005652 7.3e-23 111.7 140 52.1
Gorai.013G056700 Gossypium raimondii HOM05D004473 ORTHO05D005652 3.6e-22 109.4 119 54.6
Gorai.001G230600 Gossypium raimondii HOM05D004473 ORTHO05D005652 6.2e-22 108.6 99 61.6
Lsat_1_v5_gn_2_89740 Lactuca sativa HOM05D004473 ORTHO05D005652 1.5e-20 104.0 93 60.2
HanXRQChr00c0572g0575931 Helianthus annuus HOM05D004473 ORTHO05D005652 3.4e-20 102.8 114 52.6
Gohir.A07G155811 Gossypium hirsutum HOM05D004473 ORTHO05D005652 5.8e-20 102.1 74 70.3
Gorai.002G165800 Gossypium raimondii HOM05D001387 ORTHO05D001250 7.5e-20 101.7 90 61.1
Lalb_Chr13g0292931 Lupinus albus HOM05D004473 ORTHO05D005652 3.7e-19 99.4 82 63.4
HanXRQChr00c0165g0572171 Helianthus annuus HOM05D004473 ORTHO05D005652 1.9e-18 97.1 71 67.6
TPR.G7920 Trifolium pratense HOM05D004473 ORTHO05D005652 1.9e-18 97.1 61 80.3
Nitab4.5_0007979g0030 Nicotiana tabacum HOM05D001387 ORTHO05D001250 1.0e-16 91.3 74 64.9
Nn4g24630 Nelumbo nucifera HOM05D004473 ORTHO05D005652 1.7e-16 90.5 79 58.2
Peaxi162Scf00219g00048 Petunia axillaris HOM05D004473 ORTHO05D001250 1.1e-13 81.3 63 66.7
Nn2g10392 Nelumbo nucifera HOM05D004473 ORTHO05D005652 5.2e-13 79.0 74 59.5
MD15G1438900 Malus domestica HOM05D004473 ORTHO05D005652 1.9e-10 70.5 65 61.5
Medtr2g089600 Medicago truncatula HOM05D004473 ORTHO05D005652 3.0e-08 63.2 32 87.5
Thhalv10012215m.g Eutrema salsugineum HOM05D004473 ORTHO05D005652 3.9e-08 62.8 76 47.4
MELO3C000879.2 Cucumis melo HOM05D004473 ORTHO05D005652 7.3e-07 58.5 56 55.4
MELO3C027497.2 Cucumis melo HOM05D004473 ORTHO05D005652 7.3e-07 58.5 56 55.4


User provided reference genes

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